RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 DUSP26Q9BV47 211 aa12.96□□□□□ -0.34
CTDP1-202ENST00000299543 SPASTQ9UBP0 616 aa12.96□□□□□ -0.34
CTDP1-202ENST00000299543 RPS6KA6Q9UK32 745 aa12.96□□□□□ -0.34
CTDP1-202ENST00000299543 LOC100506127A0A0U1RQW1 187 aa12.95□□□□□ -0.34
CTDP1-202ENST00000299543 NRG2O14511 850 aaPredicted RBP12.95□□□□□ -0.34
CTDP1-202ENST00000299543 LRG1P02750 347 aa12.95□□□□□ -0.34
CTDP1-202ENST00000299543 C8GP07360 202 aa12.95□□□□□ -0.34
CTDP1-202ENST00000299543 C1SP09871 688 aa12.95□□□□□ -0.34
CTDP1-202ENST00000299543 ACPPP15309 386 aa12.95□□□□□ -0.34
CTDP1-202ENST00000299543 PTPN6P29350 595 aa12.95□□□□□ -0.34
CTDP1-202ENST00000299543 RRM2P31350 389 aa12.95□□□□□ -0.34
CTDP1-202ENST00000299543 SPINT3P49223 89 aa12.95□□□□□ -0.34
CTDP1-202ENST00000299543 GZMMP51124 257 aa12.95□□□□□ -0.34
CTDP1-202ENST00000299543 CREMQ03060 361 aa12.95□□□□□ -0.34
CTDP1-202ENST00000299543 STARD3Q14849 445 aa12.95□□□□□ -0.34
CTDP1-202ENST00000299543 CLCA4Q14CN2 919 aa12.95□□□□□ -0.34
CTDP1-202ENST00000299543 CPTPQ5TA50 214 aa12.95□□□□□ -0.34
CTDP1-202ENST00000299543 TPGS2Q68CL5 300 aa12.95□□□□□ -0.34
CTDP1-202ENST00000299543 THOC6Q86W42 341 aaKnown RBP12.95□□□□□ -0.34
CTDP1-202ENST00000299543 SLC44A2Q8IWA5 706 aaPredicted RBP12.95□□□□□ -0.34
CTDP1-202ENST00000299543 ZNF558Q96NG5 402 aa12.95□□□□□ -0.34
CTDP1-202ENST00000299543 FAM83DQ9H4H8 585 aa12.95□□□□□ -0.34
CTDP1-202ENST00000299543 MAGIXQ9H6Y5 334 aa12.95□□□□□ -0.34
CTDP1-202ENST00000299543 SIRT5Q9NXA8 310 aa12.95□□□□□ -0.34
CTDP1-202ENST00000299543 TMPRSS11EQ9UL52 423 aa12.95□□□□□ -0.34
CTDP1-202ENST00000299543 CCL26Q9Y258 94 aa12.95□□□□□ -0.34
CTDP1-202ENST00000299543 AP3M1Q9Y2T2 418 aa12.95□□□□□ -0.34
CTDP1-202ENST00000299543 TPPPO94811 219 aa12.95□□□□□ -0.34
CTDP1-202ENST00000299543 CD36P16671 472 aa12.95□□□□□ -0.34
CTDP1-202ENST00000299543 PCMT1P22061 227 aa12.95□□□□□ -0.34
CTDP1-202ENST00000299543 EIF2DP41214 584 aaKnown RBP12.95□□□□□ -0.34
CTDP1-202ENST00000299543 MEF2AQ02078 507 aaPredicted RBP12.95□□□□□ -0.34
CTDP1-202ENST00000299543 CBX2Q14781 532 aaPredicted RBP12.95□□□□□ -0.34
CTDP1-202ENST00000299543 HIST2H2ACQ16777 129 aaPredicted RBP12.95□□□□□ -0.34
CTDP1-202ENST00000299543 OR5AK3PQ8NH89 298 aa12.95□□□□□ -0.34
CTDP1-202ENST00000299543 CSGALNACT1Q8TDX6 532 aa12.95□□□□□ -0.34
CTDP1-202ENST00000299543 UBASH3BQ8TF42 649 aa12.95□□□□□ -0.34
CTDP1-202ENST00000299543 UBTD2Q8WUN7 234 aa12.95□□□□□ -0.34
CTDP1-202ENST00000299543 TMEM159Q96B96 161 aa12.95□□□□□ -0.34
CTDP1-202ENST00000299543 RIOK2Q9BVS4 552 aaKnown RBP12.95□□□□□ -0.34
CTDP1-202ENST00000299543 TM9SF3Q9HD45 589 aa12.95□□□□□ -0.34
CTDP1-202ENST00000299543 FAM172BPA6NC97 362 aa12.95□□□□□ -0.34
CTDP1-202ENST00000299543 TSPAN4O14817 238 aa12.95□□□□□ -0.34
CTDP1-202ENST00000299543 SUV39H1O43463 412 aa12.95□□□□□ -0.34
CTDP1-202ENST00000299543 GREM1O60565 184 aa12.95□□□□□ -0.34
CTDP1-202ENST00000299543 CD22P20273 847 aa12.95□□□□□ -0.34
CTDP1-202ENST00000299543 FPR1P21462 350 aa12.95□□□□□ -0.34
CTDP1-202ENST00000299543 C21orf33P30042 268 aaPredicted RBP12.95□□□□□ -0.34
CTDP1-202ENST00000299543 PTGS2P35354 604 aa12.95□□□□□ -0.34
CTDP1-202ENST00000299543 MASP1P48740 699 aa12.95□□□□□ -0.34
CTDP1-202ENST00000299543 SOWAHCQ53LP3 525 aaPredicted RBP12.95□□□□□ -0.34
CTDP1-202ENST00000299543 GDPD3Q7L5L3 318 aa12.95□□□□□ -0.34
CTDP1-202ENST00000299543 TMPRSS11BQ86T26 416 aa12.95□□□□□ -0.34
CTDP1-202ENST00000299543 ZZZ3Q8IYH5 903 aa12.95□□□□□ -0.34
CTDP1-202ENST00000299543 ST13P5Q8NFI4 369 aaPredicted RBP12.95□□□□□ -0.34
CTDP1-202ENST00000299543 NEDD4LQ96PU5 975 aa12.95□□□□□ -0.34
CTDP1-202ENST00000299543 FYTTD1Q96QD9 318 aaKnown RBP12.95□□□□□ -0.34
CTDP1-202ENST00000299543 DSN1Q9H410 356 aa12.95□□□□□ -0.34
CTDP1-202ENST00000299543 ZC4H2Q9NQZ6 224 aa12.95□□□□□ -0.34
CTDP1-202ENST00000299543 SLC25A13Q9UJS0 675 aa12.95□□□□□ -0.34
CTDP1-202ENST00000299543 SNX8Q9Y5X2 465 aa12.95□□□□□ -0.34
CTDP1-202ENST00000299543 CENPBD1B2RD01 187 aa12.94□□□□□ -0.34
CTDP1-202ENST00000299543 SLC16A6O15403 523 aa12.94□□□□□ -0.34
CTDP1-202ENST00000299543 ETHE1O95571 254 aa12.94□□□□□ -0.34
CTDP1-202ENST00000299543 ALDH1A1P00352 501 aa12.94□□□□□ -0.34
CTDP1-202ENST00000299543 CBSLP0DN79 551 aa12.94□□□□□ -0.34
CTDP1-202ENST00000299543 CBSP35520 551 aa12.94□□□□□ -0.34
CTDP1-202ENST00000299543 GABARAPL2P60520 117 aa12.94□□□□□ -0.34
CTDP1-202ENST00000299543 PFN3P60673 137 aa12.94□□□□□ -0.34
CTDP1-202ENST00000299543 SNRPD2P62316 118 aaKnown RBP12.94□□□□□ -0.34
CTDP1-202ENST00000299543 HSD11B1LQ7Z5J1 315 aa12.94□□□□□ -0.34
CTDP1-202ENST00000299543 NAGSQ8N159 534 aa12.94□□□□□ -0.34
CTDP1-202ENST00000299543 OR6F1Q8NGZ6 308 aa12.94□□□□□ -0.34
CTDP1-202ENST00000299543 ASZ1Q8WWH4 475 aa12.94□□□□□ -0.34
CTDP1-202ENST00000299543 CNDP2Q96KP4 475 aaKnown RBP12.94□□□□□ -0.34
CTDP1-202ENST00000299543 TMEM121BQ9BXQ6 578 aaPredicted RBP12.94□□□□□ -0.34
CTDP1-202ENST00000299543 RNF167Q9H6Y7 350 aa12.94□□□□□ -0.34
CTDP1-202ENST00000299543 IL21Q9HBE4 155 aa12.94□□□□□ -0.34
CTDP1-202ENST00000299543 ACSL6Q9UKU0 697 aa12.94□□□□□ -0.34
CTDP1-202ENST00000299543 GABRR3A8MPY1 467 aa12.94□□□□□ -0.34
CTDP1-202ENST00000299543 M0QX08 132 aa12.94□□□□□ -0.34
CTDP1-202ENST00000299543 LEFTY2O00292 366 aa12.94□□□□□ -0.34
CTDP1-202ENST00000299543 CCL16O15467 120 aa12.94□□□□□ -0.34
CTDP1-202ENST00000299543 TSPAN6O43657 245 aa12.94□□□□□ -0.34
CTDP1-202ENST00000299543 POU1F1P28069 291 aa12.94□□□□□ -0.34
CTDP1-202ENST00000299543 RYKP34925 604 aa12.94□□□□□ -0.34
CTDP1-202ENST00000299543 KRT20P35900 424 aa12.94□□□□□ -0.34
CTDP1-202ENST00000299543 SRSF11Q05519 484 aaKnown RBP12.94□□□□□ -0.34
CTDP1-202ENST00000299543 GBX1Q14549 363 aa12.94□□□□□ -0.34
CTDP1-202ENST00000299543 STK11Q15831 433 aa12.94□□□□□ -0.34
CTDP1-202ENST00000299543 FAM9CQ8IZT9 166 aa12.94□□□□□ -0.34
CTDP1-202ENST00000299543 VPS37AQ8NEZ2 397 aa12.94□□□□□ -0.34
CTDP1-202ENST00000299543 JPH3Q8WXH2 748 aaPredicted RBP12.94□□□□□ -0.34
CTDP1-202ENST00000299543 ZHX1-C8orf76Q96EF9 292 aa12.94□□□□□ -0.34
CTDP1-202ENST00000299543 DEFB118Q96PH6 123 aa12.94□□□□□ -0.34
CTDP1-202ENST00000299543 MAN2B2Q9Y2E5 1009 aa12.94□□□□□ -0.34
CTDP1-202ENST00000299543 ARHGEF33A8MVX0 844 aa12.94□□□□□ -0.34
CTDP1-202ENST00000299543 RGS5O15539 181 aa12.94□□□□□ -0.34
CTDP1-202ENST00000299543 SH3BP5O60239 455 aa12.94□□□□□ -0.34
CTDP1-202ENST00000299543 POP4O95707 220 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms