RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 JUPP14923 745 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 CPA3P15088 417 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 ZNF28P17035 718 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 IMPDH1P20839 514 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 CCND1P24385 295 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 CMPK1P30085 196 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 TSPAN7P41732 249 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 CASP2P42575 452 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 PIK3CGP48736 1102 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 PPM1FP49593 454 aaPredicted RBP5.63□□□□□ -1.51
SSX3-201ENST00000298396 ERVPABLB-1P60509 514 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 ABATP80404 500 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 MC2RQ01718 297 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 DOC2AQ14183 400 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 TBCCQ15814 346 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 PRTGQ2VWP7 1150 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 C3orf38Q5JPI3 329 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 NKAPLQ5M9Q1 402 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 THEMIS2Q5TEJ8 643 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 LIPMQ5VYY2 423 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 ATG9BQ674R7 924 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 PWWP2BQ6NUJ5 590 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 LETMD1Q6P1Q0 360 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 LRFN4Q6PJG9 635 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 BNC2Q6ZN30 1099 aaPredicted RBP5.63□□□□□ -1.51
SSX3-201ENST00000298396 ZCCHC23Q6ZST2 131 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 FRMD7Q6ZUT3 714 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 RAB11FIP2Q7L804 512 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 CROCCP2Q86T23 111 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 TMPRSS11BQ86T26 416 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 SYVN1Q86TM6 617 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 KMT5CQ86Y97 462 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 TMEM151BQ8IW70 566 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 RNF175Q8N4F7 328 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 RAB42Q8N4Z0 105 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 L3MBTL4Q8NA19 623 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 SLC38A9Q8NBW4 561 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 AGBL5Q8NDL9 886 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 MDM1Q8TC05 714 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 RDH11Q8TC12 318 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 ZUFSPQ96AP4 578 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 SLC22A18Q96BI1 424 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 TM4SF19Q96DZ7 209 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 C10orf90Q96M02 699 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 OR2A5Q96R48 311 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 RUFY1Q96T51 708 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 CTRCQ99895 268 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 MACROD1Q9BQ69 325 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 HAUS8Q9BT25 410 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 SARGQ9BW04 601 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 SPRY4Q9C004 299 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 C20orf27Q9GZN8 174 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 SPRTNQ9H040 489 aaPredicted RBP5.63□□□□□ -1.51
SSX3-201ENST00000298396 PCBD2Q9H0N5 130 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 NOL11Q9H8H0 719 aaKnown RBP5.63□□□□□ -1.51
SSX3-201ENST00000298396 CNOT10Q9H9A5 744 aaKnown RBP5.63□□□□□ -1.51
SSX3-201ENST00000298396 SEMA4BQ9NPR2 832 aaPredicted RBP5.63□□□□□ -1.51
SSX3-201ENST00000298396 STARD5Q9NSY2 213 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 TMEM184CQ9NVA4 438 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 SOHLH2Q9NX45 425 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 GPRC5BQ9NZH0 403 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 ANKMY1Q9P2S6 941 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 OPTCQ9UBM4 332 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 PISDQ9UG56 409 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 TMCO1Q9UM00 188 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 MRPS2Q9Y399 296 aaKnown RBP5.63□□□□□ -1.51
SSX3-201ENST00000298396 RNF11Q9Y3C5 154 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 B3GALT1Q9Y5Z6 326 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 CFAP47Q6ZTR5 3102 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 EML6Q6ZMW3 1958 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 EXPH5Q8NEV8 1989 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 A0A0J9YVX5 310 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 TEX51A0A1B0GUA7 166 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 TRBC2A0A5B9 178 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 FITM1A5D6W6 292 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 H0YGG7 62 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 DYNC1I1O14576 645 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 MSTNO14793 375 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 TM9SF1O15321 606 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 ITM2AO43736 263 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 BRINP1O60477 761 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 TRIM13O60858 407 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 LYPLA1O75608 230 aaPredicted RBP5.62□□□□□ -1.51
SSX3-201ENST00000298396 ZWINTO95229 277 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 CHRNGP07510 517 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 FGF5P12034 268 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 DRD2P14416 443 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 EZRP15311 586 aaKnown RBP5.62□□□□□ -1.51
SSX3-201ENST00000298396 GNAZP19086 355 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 TAC1P20366 129 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 HPDP32754 393 aaPredicted RBP5.62□□□□□ -1.51
SSX3-201ENST00000298396 CSTF2P33240 577 aaKnown RBP eCLIP5.62□□□□□ -1.51
SSX3-201ENST00000298396 HTR6P50406 440 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 CCR8P51685 355 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 MAPK10P53779 464 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 SLC18A1P54219 525 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 NAGLUP54802 743 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 FOXA1P55317 472 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 VSX2P58304 361 aaPredicted RBP5.62□□□□□ -1.51
SSX3-201ENST00000298396 ARF3P61204 181 aaPredicted RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms