RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 GDPD4Q6W3E5 623 aa23.44■■□□□ 1.34
SPTSSA-201ENST00000298130 LGI4Q8N135 537 aa23.44■■□□□ 1.34
SPTSSA-201ENST00000298130 C11orf65Q8NCR3 313 aa23.44■■□□□ 1.34
SPTSSA-201ENST00000298130 OR2A12Q8NGT7 310 aa23.44■■□□□ 1.34
SPTSSA-201ENST00000298130 WDR48Q8TAF3 677 aa23.44■■□□□ 1.34
SPTSSA-201ENST00000298130 LINC00597Q9H2U6 94 aa23.44■■□□□ 1.34
SPTSSA-201ENST00000298130 PSORS1C1Q9UIG5 152 aa23.44■■□□□ 1.34
SPTSSA-201ENST00000298130 AGRPO00253 132 aa23.44■■□□□ 1.34
SPTSSA-201ENST00000298130 POU1F1P28069 291 aa23.44■■□□□ 1.34
SPTSSA-201ENST00000298130 DOC2BQ14184 412 aa23.44■■□□□ 1.34
SPTSSA-201ENST00000298130 STARD3Q14849 445 aa23.44■■□□□ 1.34
SPTSSA-201ENST00000298130 PRSS53Q2L4Q9 553 aa23.44■■□□□ 1.34
SPTSSA-201ENST00000298130 PGBD3Q8N328 593 aa23.44■■□□□ 1.34
SPTSSA-201ENST00000298130 C11orf24Q96F05 449 aaPredicted RBP23.44■■□□□ 1.34
SPTSSA-201ENST00000298130 ZNF226Q9NYT6 803 aa23.44■■□□□ 1.34
SPTSSA-201ENST00000298130 HS3ST2Q9Y278 367 aa23.44■■□□□ 1.34
SPTSSA-201ENST00000298130 CNOT3O75175 753 aaKnown RBP23.43■■□□□ 1.34
SPTSSA-201ENST00000298130 SPNP16150 400 aa23.43■■□□□ 1.34
SPTSSA-201ENST00000298130 SELENOWP63302 87 aa23.43■■□□□ 1.34
SPTSSA-201ENST00000298130 ZNF404Q494X3 552 aa23.43■■□□□ 1.34
SPTSSA-201ENST00000298130 MSANTD1Q6ZTZ1 278 aa23.43■■□□□ 1.34
SPTSSA-201ENST00000298130 TCEAL8Q8IYN2 117 aa23.43■■□□□ 1.34
SPTSSA-201ENST00000298130 DNAJC22Q8N4W6 341 aa23.43■■□□□ 1.34
SPTSSA-201ENST00000298130 VPS37AQ8NEZ2 397 aa23.43■■□□□ 1.34
SPTSSA-201ENST00000298130 EPYCQ99645 322 aa23.43■■□□□ 1.34
SPTSSA-201ENST00000298130 SLC35A5Q9BS91 424 aa23.43■■□□□ 1.34
SPTSSA-201ENST00000298130 ZNF8P17098 575 aaPredicted RBP23.43■■□□□ 1.34
SPTSSA-201ENST00000298130 NKX2-5P52952 324 aaPredicted RBP23.43■■□□□ 1.34
SPTSSA-201ENST00000298130 MVDP53602 400 aa23.43■■□□□ 1.34
SPTSSA-201ENST00000298130 RNF130Q86XS8 419 aa23.43■■□□□ 1.34
SPTSSA-201ENST00000298130 SLC44A2Q8IWA5 706 aaPredicted RBP23.43■■□□□ 1.34
SPTSSA-201ENST00000298130 POC5Q8NA72 575 aa23.43■■□□□ 1.34
SPTSSA-201ENST00000298130 ZNF675Q8TD23 568 aa23.43■■□□□ 1.34
SPTSSA-201ENST00000298130 SPASTQ9UBP0 616 aa23.43■■□□□ 1.34
SPTSSA-201ENST00000298130 OGDHLQ9ULD0 1010 aa23.43■■□□□ 1.34
SPTSSA-201ENST00000298130 DSCR3O14972 297 aa23.42■■□□□ 1.34
SPTSSA-201ENST00000298130 GSTM1P09488 218 aa23.42■■□□□ 1.34
SPTSSA-201ENST00000298130 SOAT1P35610 550 aa23.42■■□□□ 1.34
SPTSSA-201ENST00000298130 GGT2P36268 569 aa23.42■■□□□ 1.34
SPTSSA-201ENST00000298130 EIF2DP41214 584 aaKnown RBP23.42■■□□□ 1.34
SPTSSA-201ENST00000298130 CCR2P41597 374 aa23.42■■□□□ 1.34
SPTSSA-201ENST00000298130 CTSKP43235 329 aa23.42■■□□□ 1.34
SPTSSA-201ENST00000298130 UBE2UQ5VVX9 321 aa23.42■■□□□ 1.34
SPTSSA-201ENST00000298130 STEAP3Q658P3 488 aa23.42■■□□□ 1.34
SPTSSA-201ENST00000298130 STX19Q8N4C7 294 aa23.42■■□□□ 1.34
SPTSSA-201ENST00000298130 ZNF740Q8NDX6 193 aa23.42■■□□□ 1.34
SPTSSA-201ENST00000298130 IPCEF1Q8WWN9 437 aaPredicted RBP23.42■■□□□ 1.34
SPTSSA-201ENST00000298130 CCM2Q9BSQ5 444 aa23.42■■□□□ 1.34
SPTSSA-201ENST00000298130 SPNS1Q9H2V7 528 aa23.42■■□□□ 1.34
SPTSSA-201ENST00000298130 SLC25A13Q9UJS0 675 aa23.42■■□□□ 1.34
SPTSSA-201ENST00000298130 DNAH14Q0VDD8 3507 aa23.42■■□□□ 1.34
SPTSSA-201ENST00000298130 TGM5O43548 720 aa23.42■■□□□ 1.34
SPTSSA-201ENST00000298130 DLGAP3O95886 979 aa23.42■■□□□ 1.34
SPTSSA-201ENST00000298130 PRIM2P49643 509 aa23.42■■□□□ 1.34
SPTSSA-201ENST00000298130 ST3GAL4Q11206 333 aa23.42■■□□□ 1.34
SPTSSA-201ENST00000298130 SP140Q13342 867 aa23.42■■□□□ 1.34
SPTSSA-201ENST00000298130 TMEM215Q68D42 235 aa23.42■■□□□ 1.34
SPTSSA-201ENST00000298130 ARMCX6Q7L4S7 300 aa23.42■■□□□ 1.34
SPTSSA-201ENST00000298130 SLC39A11Q8N1S5 342 aa23.42■■□□□ 1.34
SPTSSA-201ENST00000298130 LMLNQ96KR4 655 aa23.42■■□□□ 1.34
SPTSSA-201ENST00000298130 ZNF558Q96NG5 402 aa23.42■■□□□ 1.34
SPTSSA-201ENST00000298130 KLHL42Q9P2K6 505 aa23.42■■□□□ 1.34
SPTSSA-201ENST00000298130 MAGEA8P43361 318 aa23.41■■□□□ 1.34
SPTSSA-201ENST00000298130 PPP5CP53041 499 aa23.41■■□□□ 1.34
SPTSSA-201ENST00000298130 RPS26P62854 115 aaKnown RBP23.41■■□□□ 1.34
SPTSSA-201ENST00000298130 GRHL2Q6ISB3 625 aa23.41■■□□□ 1.34
SPTSSA-201ENST00000298130 WRAP53Q9BUR4 548 aaKnown RBP23.41■■□□□ 1.34
SPTSSA-201ENST00000298130 MS4A12Q9NXJ0 267 aa23.41■■□□□ 1.34
SPTSSA-201ENST00000298130 PPIL1Q9Y3C6 166 aa23.41■■□□□ 1.34
SPTSSA-201ENST00000298130 SNX8Q9Y5X2 465 aa23.41■■□□□ 1.34
SPTSSA-201ENST00000298130 PRAMEF33A0A0G2JMD5 474 aa23.41■■□□□ 1.34
SPTSSA-201ENST00000298130 CLDN24A6NM45 220 aa23.41■■□□□ 1.34
SPTSSA-201ENST00000298130 PRAMEF10O60809 474 aa23.41■■□□□ 1.34
SPTSSA-201ENST00000298130 SLCO2B1O94956 709 aa23.41■■□□□ 1.34
SPTSSA-201ENST00000298130 PTPN5P54829 565 aa23.41■■□□□ 1.34
SPTSSA-201ENST00000298130 ELP6Q0PNE2 266 aa23.41■■□□□ 1.34
SPTSSA-201ENST00000298130 SCARB2Q14108 478 aa23.41■■□□□ 1.34
SPTSSA-201ENST00000298130 MPEG1Q2M385 716 aa23.41■■□□□ 1.34
SPTSSA-201ENST00000298130 UAP1L1Q3KQV9 507 aa23.41■■□□□ 1.34
SPTSSA-201ENST00000298130 TMEM220Q6QAJ8 160 aa23.41■■□□□ 1.34
SPTSSA-201ENST00000298130 LYSMD2Q8IV50 215 aa23.41■■□□□ 1.34
SPTSSA-201ENST00000298130 OR5M11Q96RB7 305 aa23.41■■□□□ 1.34
SPTSSA-201ENST00000298130 GABARAPL3Q9BY60 117 aa23.41■■□□□ 1.34
SPTSSA-201ENST00000298130 RAB23Q9ULC3 237 aa23.41■■□□□ 1.34
SPTSSA-201ENST00000298130 CCDC88CQ9P219 2028 aa23.41■■□□□ 1.34
SPTSSA-201ENST00000298130 CLCA1A8K7I4 914 aa23.4■■□□□ 1.34
SPTSSA-201ENST00000298130 CCL16O15467 120 aa23.4■■□□□ 1.34
SPTSSA-201ENST00000298130 ADORA3P0DMS8 318 aa23.4■■□□□ 1.34
SPTSSA-201ENST00000298130 GRK3P35626 688 aa23.4■■□□□ 1.34
SPTSSA-201ENST00000298130 GRIN2CQ14957 1233 aa23.4■■□□□ 1.34
SPTSSA-201ENST00000298130 ARMCX4Q5H9R4 360 aa23.4■■□□□ 1.34
SPTSSA-201ENST00000298130 HEATR4Q86WZ0 1026 aa23.4■■□□□ 1.34
SPTSSA-201ENST00000298130 CHTF18Q8WVB6 975 aa23.4■■□□□ 1.34
SPTSSA-201ENST00000298130 TCEAL4Q96EI5 215 aa23.4■■□□□ 1.34
SPTSSA-201ENST00000298130 POU2F3Q9UKI9 436 aa23.4■■□□□ 1.34
SPTSSA-201ENST00000298130 PCDHGA2Q9Y5H1 932 aa23.4■■□□□ 1.34
SPTSSA-201ENST00000298130 ZNF106Q9H2Y7 1883 aaKnown RBP23.4■■□□□ 1.34
SPTSSA-201ENST00000298130 USP34Q70CQ2 3546 aa23.4■■□□□ 1.34
SPTSSA-201ENST00000298130 METTL15A6NJ78 407 aa23.4■■□□□ 1.34
SPTSSA-201ENST00000298130 PRMT3O60678 531 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms