RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 NKIRAS1Q9NYS0 192 aa11.51□□□□□ -0.57
HMGB2-201ENST00000296503 ZNF180Q9UJW8 692 aa11.51□□□□□ -0.57
HMGB2-201ENST00000296503 TRIM49D1C9J1S8 452 aa11.5□□□□□ -0.57
HMGB2-201ENST00000296503 CDH16O75309 829 aa11.5□□□□□ -0.57
HMGB2-201ENST00000296503 STK16O75716 305 aa11.5□□□□□ -0.57
HMGB2-201ENST00000296503 KLHL2O95198 593 aa11.5□□□□□ -0.57
HMGB2-201ENST00000296503 MED26O95402 600 aa11.5□□□□□ -0.57
HMGB2-201ENST00000296503 SNRPAP09012 282 aaKnown RBP11.5□□□□□ -0.57
HMGB2-201ENST00000296503 TAC1P20366 129 aa11.5□□□□□ -0.57
HMGB2-201ENST00000296503 BCL6P41182 706 aa11.5□□□□□ -0.57
HMGB2-201ENST00000296503 FOLR3P41439 243 aa11.5□□□□□ -0.57
HMGB2-201ENST00000296503 SLC6A12P48065 614 aa11.5□□□□□ -0.57
HMGB2-201ENST00000296503 EMP3P54852 163 aa11.5□□□□□ -0.57
HMGB2-201ENST00000296503 ACAP2Q15057 778 aa11.5□□□□□ -0.57
HMGB2-201ENST00000296503 GARNL3Q5VVW2 1013 aa11.5□□□□□ -0.57
HMGB2-201ENST00000296503 OR52E8Q6IFG1 317 aa11.5□□□□□ -0.57
HMGB2-201ENST00000296503 CGB2Q6NT52 195 aa11.5□□□□□ -0.57
HMGB2-201ENST00000296503 PRMT9Q6P2P2 845 aa11.5□□□□□ -0.57
HMGB2-201ENST00000296503 PCSK4Q6UW60 755 aa11.5□□□□□ -0.57
HMGB2-201ENST00000296503 TMPRSS11BQ86T26 416 aa11.5□□□□□ -0.57
HMGB2-201ENST00000296503 ASPGQ86U10 573 aa11.5□□□□□ -0.57
HMGB2-201ENST00000296503 CENPLQ8N0S6 344 aaPredicted RBP11.5□□□□□ -0.57
HMGB2-201ENST00000296503 SNX31Q8N9S9 440 aa11.5□□□□□ -0.57
HMGB2-201ENST00000296503 MFSD9Q8NBP5 474 aa11.5□□□□□ -0.57
HMGB2-201ENST00000296503 LSM14AQ8ND56 463 aaKnown RBP11.5□□□□□ -0.57
HMGB2-201ENST00000296503 FAM13CQ8NE31 585 aa11.5□□□□□ -0.57
HMGB2-201ENST00000296503 OR4K1Q8NGD4 311 aa11.5□□□□□ -0.57
HMGB2-201ENST00000296503 MMABQ96EY8 250 aaPredicted RBP11.5□□□□□ -0.57
HMGB2-201ENST00000296503 AIF1LQ9BQI0 150 aa11.5□□□□□ -0.57
HMGB2-201ENST00000296503 PELI2Q9HAT8 420 aa11.5□□□□□ -0.57
HMGB2-201ENST00000296503 SLC22A11Q9NSA0 550 aa11.5□□□□□ -0.57
HMGB2-201ENST00000296503 DNAJC11Q9NVH1 559 aa11.5□□□□□ -0.57
HMGB2-201ENST00000296503 MAN2B2Q9Y2E5 1009 aa11.5□□□□□ -0.57
HMGB2-201ENST00000296503 STK38LQ9Y2H1 464 aa11.5□□□□□ -0.57
HMGB2-201ENST00000296503 CCDC88CQ9P219 2028 aa11.5□□□□□ -0.57
HMGB2-201ENST00000296503 SYCE1LA8MT33 242 aa11.49□□□□□ -0.57
HMGB2-201ENST00000296503 A8MUI8 341 aa11.49□□□□□ -0.57
HMGB2-201ENST00000296503 UBXN8O00124 270 aa11.49□□□□□ -0.57
HMGB2-201ENST00000296503 P2RX6O15547 441 aa11.49□□□□□ -0.57
HMGB2-201ENST00000296503 CCNT2O60583 730 aaKnown RBP11.49□□□□□ -0.57
HMGB2-201ENST00000296503 KERAO60938 352 aa11.49□□□□□ -0.57
HMGB2-201ENST00000296503 KLF7O75840 302 aaPredicted RBP11.49□□□□□ -0.57
HMGB2-201ENST00000296503 IPO13O94829 963 aaKnown RBP11.49□□□□□ -0.57
HMGB2-201ENST00000296503 ALBP02768 609 aa11.49□□□□□ -0.57
HMGB2-201ENST00000296503 ITGAXP20702 1163 aa11.49□□□□□ -0.57
HMGB2-201ENST00000296503 OTX2P32243 289 aa11.49□□□□□ -0.57
HMGB2-201ENST00000296503 GGT5P36269 586 aa11.49□□□□□ -0.57
HMGB2-201ENST00000296503 VHLP40337 213 aa11.49□□□□□ -0.57
HMGB2-201ENST00000296503 OCA2Q04671 838 aa11.49□□□□□ -0.57
HMGB2-201ENST00000296503 IL10RAQ13651 578 aa11.49□□□□□ -0.57
HMGB2-201ENST00000296503 SSPNQ14714 243 aa11.49□□□□□ -0.57
HMGB2-201ENST00000296503 MRPL14Q6P1L8 145 aaKnown RBP11.49□□□□□ -0.57
HMGB2-201ENST00000296503 VN1R4Q7Z5H5 301 aa11.49□□□□□ -0.57
HMGB2-201ENST00000296503 TDRPQ86YL5 185 aa11.49□□□□□ -0.57
HMGB2-201ENST00000296503 KIF2BQ8N4N8 673 aa11.49□□□□□ -0.57
HMGB2-201ENST00000296503 ZNF740Q8NDX6 193 aa11.49□□□□□ -0.57
HMGB2-201ENST00000296503 RHEBL1Q8TAI7 183 aa11.49□□□□□ -0.57
HMGB2-201ENST00000296503 THAP4Q8WY91 577 aa11.49□□□□□ -0.57
HMGB2-201ENST00000296503 C10orf90Q96M02 699 aa11.49□□□□□ -0.57
HMGB2-201ENST00000296503 ATOH8Q96SQ7 321 aa11.49□□□□□ -0.57
HMGB2-201ENST00000296503 TMEM79Q9BSE2 394 aa11.49□□□□□ -0.57
HMGB2-201ENST00000296503 NUDT4Q9NZJ9 180 aa11.49□□□□□ -0.57
HMGB2-201ENST00000296503 SENP1Q9P0U3 644 aa11.49□□□□□ -0.57
HMGB2-201ENST00000296503 SCOCQ9UIL1 159 aa11.49□□□□□ -0.57
HMGB2-201ENST00000296503 PTBP2Q9UKA9 531 aaKnown RBP11.49□□□□□ -0.57
HMGB2-201ENST00000296503 IGSF10Q6WRI0 2623 aa11.49□□□□□ -0.57
HMGB2-201ENST00000296503 FER1L5A0AVI2 2057 aa11.49□□□□□ -0.57
HMGB2-201ENST00000296503 A0A0A6YYC8 382 aaPredicted RBP11.49□□□□□ -0.57
HMGB2-201ENST00000296503 TRBC2A0A5B9 178 aa11.49□□□□□ -0.57
HMGB2-201ENST00000296503 I3L1I5 382 aaPredicted RBP11.49□□□□□ -0.57
HMGB2-201ENST00000296503 PRPF4O43172 522 aaKnown RBP eCLIP11.49□□□□□ -0.575e-7■■■■□ 20.1
HMGB2-201ENST00000296503 ONECUT2O95948 504 aa11.49□□□□□ -0.57
HMGB2-201ENST00000296503 SLC35G6P0C7Q6 338 aa11.49□□□□□ -0.57
HMGB2-201ENST00000296503 FAM87AP0C7U9 286 aa11.49□□□□□ -0.57
HMGB2-201ENST00000296503 C1GALT1C1LP0DN25 315 aa11.49□□□□□ -0.57
HMGB2-201ENST00000296503 FBLP22087 321 aaKnown RBP11.49□□□□□ -0.57
HMGB2-201ENST00000296503 CXCR2P25025 360 aa11.49□□□□□ -0.57
HMGB2-201ENST00000296503 VARSP26640 1264 aaKnown RBP11.49□□□□□ -0.57
HMGB2-201ENST00000296503 AVPR1BP47901 424 aa11.49□□□□□ -0.57
HMGB2-201ENST00000296503 CSRP3P50461 194 aa11.49□□□□□ -0.57
HMGB2-201ENST00000296503 FOXL2P58012 376 aa11.49□□□□□ -0.57
HMGB2-201ENST00000296503 CDC16Q13042 620 aa11.49□□□□□ -0.57
HMGB2-201ENST00000296503 CUL3Q13618 768 aa11.49□□□□□ -0.57
HMGB2-201ENST00000296503 NKG7Q16617 165 aa11.49□□□□□ -0.57
HMGB2-201ENST00000296503 ADGRD1Q6QNK2 874 aa11.49□□□□□ -0.57
HMGB2-201ENST00000296503 RAB43Q86YS6 212 aa11.49□□□□□ -0.57
HMGB2-201ENST00000296503 KLHDC8AQ8IYD2 350 aa11.49□□□□□ -0.57
HMGB2-201ENST00000296503 PLD6Q8N2A8 252 aaKnown RBP11.49□□□□□ -0.57
HMGB2-201ENST00000296503 EXD3Q8N9H8 876 aa11.49□□□□□ -0.57
HMGB2-201ENST00000296503 PDPRQ8NCN5 879 aa11.49□□□□□ -0.57
HMGB2-201ENST00000296503 OR2Y1Q8NGV0 311 aa11.49□□□□□ -0.57
HMGB2-201ENST00000296503 FKBP10Q96AY3 582 aa11.49□□□□□ -0.57
HMGB2-201ENST00000296503 SLC7A6OSQ96CW6 309 aaPredicted RBP11.49□□□□□ -0.57
HMGB2-201ENST00000296503 TM4SF19Q96DZ7 209 aa11.49□□□□□ -0.57
HMGB2-201ENST00000296503 MVB12AQ96EY5 273 aa11.49□□□□□ -0.57
HMGB2-201ENST00000296503 SCYL1Q96KG9 808 aa11.49□□□□□ -0.57
HMGB2-201ENST00000296503 LRRC37BQ96QE4 947 aa11.49□□□□□ -0.57
HMGB2-201ENST00000296503 NR1H4Q96RI1 486 aaPredicted RBP11.49□□□□□ -0.57
HMGB2-201ENST00000296503 CD244Q9BZW8 370 aa11.49□□□□□ -0.57
HMGB2-201ENST00000296503 DRC3Q9H069 523 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms