RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 MRPS17Q9Y2R5 130 aaKnown RBP8.76□□□□□ -1.01
PDPN-201ENST00000294489 PCDHB11Q9Y5F2 797 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 EML5Q05BV3 1969 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 H0Y8X5 98 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 SAP18O00422 153 aaKnown RBP8.76□□□□□ -1.01
PDPN-201ENST00000294489 EI24O14681 340 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 ACOX3O15254 700 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 CCNDBP1O95273 360 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 LINGO3P0C6S8 592 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 FOSL2P15408 326 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 SERPINB1P30740 379 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 RABIFP47224 123 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 CCR8P51685 355 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 REEP5Q00765 189 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 CARM1Q86X55 608 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 NRROSQ86YC3 692 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 CLECL1Q8IZS7 167 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.76□□□□□ -1.01
PDPN-201ENST00000294489 TFAP2CQ92754 450 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 CLDN23Q96B33 292 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 SDCCAG3Q96C92 435 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 PDXPQ96GD0 296 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 ANKRD60Q9BZ19 345 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 PCED1AQ9H1Q7 454 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 MAGIXQ9H6Y5 334 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 AASDHPPTQ9NRN7 309 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 IMP3Q9NV31 184 aaKnown RBP8.76□□□□□ -1.01
PDPN-201ENST00000294489 TRNAU1APQ9NX07 287 aaKnown RBP8.76□□□□□ -1.01
PDPN-201ENST00000294489 SCHIP1Q9P0W5 487 aaPredicted RBP8.76□□□□□ -1.01
PDPN-201ENST00000294489 ATP6V1HQ9UI12 483 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 KCNK6Q9Y257 313 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 BTBD3Q9Y2F9 522 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 GPSM3Q9Y4H4 160 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 CEP192Q8TEP8 1941 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 RNASET2O00584 256 aaKnown RBP8.76□□□□□ -1.01
PDPN-201ENST00000294489 GNGT2O14610 69 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 ZNF217O75362 1048 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 PRKD3O94806 890 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 KLHL18O94889 574 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 SERPINA1P01009 418 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 GPX2P18283 190 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 IL1RNP18510 177 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 CD6P30203 668 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 RPS9P46781 194 aaKnown RBP8.76□□□□□ -1.01
PDPN-201ENST00000294489 RAB28P51157 221 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 ZP2Q05996 745 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 MERTKQ12866 999 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 ALG11Q2TAA5 492 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 ZCCHC8Q6NZY4 707 aaKnown RBP8.76□□□□□ -1.01
PDPN-201ENST00000294489 IYDQ6PHW0 289 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 ENPP6Q6UWR7 440 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 EID3Q8N140 333 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 GJD3Q8N144 294 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 SLC22A18ASQ8N1D0 253 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 MAGEE2Q8TD90 523 aaPredicted RBP8.76□□□□□ -1.01
PDPN-201ENST00000294489 NETO1Q8TDF5 533 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 PHF12Q96QT6 1004 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 NELL2Q99435 816 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 ADI1Q9BV57 179 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 SARGQ9BW04 601 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 ZNF696Q9H7X3 374 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 CARS2Q9HA77 564 aaKnown RBP8.76□□□□□ -1.01
PDPN-201ENST00000294489 TPT1P8Q9HAU6 139 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 OLAHQ9NV23 265 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 SMPD3Q9NY59 655 aaPredicted RBP8.76□□□□□ -1.01
PDPN-201ENST00000294489 SPASTQ9UBP0 616 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 DNAJB9Q9UBS3 223 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 ZNF282Q9UDV7 671 aaPredicted RBP8.76□□□□□ -1.01
PDPN-201ENST00000294489 CA14Q9ULX7 337 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 VPS4AQ9UN37 437 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 SAMD4AQ9UPU9 718 aaKnown RBP8.76□□□□□ -1.01
PDPN-201ENST00000294489 ICKQ9UPZ9 632 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 CA5BQ9Y2D0 317 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 GMEB1Q9Y692 573 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 IGHV1OR15-9A0A0B4J2B8 117 aa8.75□□□□□ -1.01
PDPN-201ENST00000294489 PDZK1P1A8MUH7 402 aa8.75□□□□□ -1.01
PDPN-201ENST00000294489 TBX6O95947 436 aaPredicted RBP8.75□□□□□ -1.01
PDPN-201ENST00000294489 CST1P01037 141 aa8.75□□□□□ -1.01
PDPN-201ENST00000294489 GBAP04062 536 aa8.75□□□□□ -1.01
PDPN-201ENST00000294489 KLK1P06870 262 aa8.75□□□□□ -1.01
PDPN-201ENST00000294489 HTR1BP28222 390 aa8.75□□□□□ -1.01
PDPN-201ENST00000294489 SRP54P61011 504 aaKnown RBP8.75□□□□□ -1.01
PDPN-201ENST00000294489 C2orf80Q0P641 193 aa8.75□□□□□ -1.01
PDPN-201ENST00000294489 GK3PQ14409 553 aa8.75□□□□□ -1.01
PDPN-201ENST00000294489 SKIV2LQ15477 1246 aaKnown RBP8.75□□□□□ -1.01
PDPN-201ENST00000294489 RNF220Q5VTB9 566 aa8.75□□□□□ -1.01
PDPN-201ENST00000294489 DUS1LQ6P1R4 473 aaKnown RBP8.75□□□□□ -1.01
PDPN-201ENST00000294489 ENPP7Q6UWV6 458 aa8.75□□□□□ -1.01
PDPN-201ENST00000294489 Q7L0L9 218 aa8.75□□□□□ -1.01
PDPN-201ENST00000294489 ZDHHC13Q8IUH4 622 aa8.75□□□□□ -1.01
PDPN-201ENST00000294489 C10orf111Q8N326 155 aa8.75□□□□□ -1.01
PDPN-201ENST00000294489 GPBAR1Q8TDU6 330 aa8.75□□□□□ -1.01
PDPN-201ENST00000294489 C16orf78Q8WTQ4 265 aa8.75□□□□□ -1.01
PDPN-201ENST00000294489 PPCDCQ96CD2 204 aa8.75□□□□□ -1.01
PDPN-201ENST00000294489 MTERF3Q96E29 417 aa8.75□□□□□ -1.01
PDPN-201ENST00000294489 TOE1Q96GM8 510 aaKnown RBP8.75□□□□□ -1.01
PDPN-201ENST00000294489 SHDQ96IW2 340 aa8.75□□□□□ -1.01
PDPN-201ENST00000294489 SPATA9Q9BWV2 254 aa8.75□□□□□ -1.01
PDPN-201ENST00000294489 MYNNQ9NPC7 610 aa8.75□□□□□ -1.01
PDPN-201ENST00000294489 PRDM8Q9NQV8 689 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms