RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 EMX1Q04741 257 aaPredicted RBP15.17■□□□□ 0.02
NCKIPSD-201ENST00000294129 COL9A2Q14055 689 aaPredicted RBP15.17■□□□□ 0.02
NCKIPSD-201ENST00000294129 ZNF234Q14588 700 aa15.17■□□□□ 0.02
NCKIPSD-201ENST00000294129 SPCS2Q15005 226 aa15.17■□□□□ 0.02
NCKIPSD-201ENST00000294129 HIST2H2ACQ16777 129 aaPredicted RBP15.17■□□□□ 0.02
NCKIPSD-201ENST00000294129 HIST2H2AA3Q6FI13 130 aa15.17■□□□□ 0.02
NCKIPSD-201ENST00000294129 PIWIL3Q7Z3Z3 882 aaKnown RBP15.17■□□□□ 0.02
NCKIPSD-201ENST00000294129 RNF130Q86XS8 419 aa15.17■□□□□ 0.02
NCKIPSD-201ENST00000294129 C11orf65Q8NCR3 313 aa15.17■□□□□ 0.02
NCKIPSD-201ENST00000294129 TUBA1CQ9BQE3 449 aa15.17■□□□□ 0.02
NCKIPSD-201ENST00000294129 REEP4Q9H6H4 257 aa15.17■□□□□ 0.02
NCKIPSD-201ENST00000294129 PLGRKTQ9HBL7 147 aa15.17■□□□□ 0.02
NCKIPSD-201ENST00000294129 PRKAG2Q9UGJ0 569 aa15.17■□□□□ 0.02
NCKIPSD-201ENST00000294129 GRXCR1A8MXD5 290 aa15.16■□□□□ 0.02
NCKIPSD-201ENST00000294129 SLC16A6O15403 523 aa15.16■□□□□ 0.02
NCKIPSD-201ENST00000294129 FAM20BO75063 409 aa15.16■□□□□ 0.02
NCKIPSD-201ENST00000294129 STATHP02808 62 aa15.16■□□□□ 0.02
NCKIPSD-201ENST00000294129 HSD3B1P14060 373 aa15.16■□□□□ 0.02
NCKIPSD-201ENST00000294129 HSD3B2P26439 372 aa15.16■□□□□ 0.02
NCKIPSD-201ENST00000294129 PNLIPRP1P54315 467 aa15.16■□□□□ 0.02
NCKIPSD-201ENST00000294129 RPS26P62854 115 aaKnown RBP15.16■□□□□ 0.02
NCKIPSD-201ENST00000294129 NPTX1Q15818 432 aa15.16■□□□□ 0.02
NCKIPSD-201ENST00000294129 ANXA8L1Q5VT79 327 aa15.16■□□□□ 0.02
NCKIPSD-201ENST00000294129 KDM4DQ6B0I6 523 aa15.16■□□□□ 0.02
NCKIPSD-201ENST00000294129 GALNT18Q6P9A2 607 aa15.16■□□□□ 0.02
NCKIPSD-201ENST00000294129 ZNF554Q86TJ5 538 aa15.16■□□□□ 0.02
NCKIPSD-201ENST00000294129 HOMEZQ8IX15 550 aa15.16■□□□□ 0.02
NCKIPSD-201ENST00000294129 TMEM184CQ9NVA4 438 aa15.16■□□□□ 0.02
NCKIPSD-201ENST00000294129 GPATCH2Q9NW75 528 aa15.16■□□□□ 0.02
NCKIPSD-201ENST00000294129 KNL1Q8NG31 2342 aa15.16■□□□□ 0.02
NCKIPSD-201ENST00000294129 A0A0G2JN53 185 aa15.16■□□□□ 0.02
NCKIPSD-201ENST00000294129 SERTM1A2A2V5 107 aa15.16■□□□□ 0.02
NCKIPSD-201ENST00000294129 LINC01553A4QN01 128 aa15.16■□□□□ 0.02
NCKIPSD-201ENST00000294129 LATO43561 262 aa15.16■□□□□ 0.02
NCKIPSD-201ENST00000294129 LILRB5O75023 590 aa15.16■□□□□ 0.02
NCKIPSD-201ENST00000294129 VIPP01282 170 aa15.16■□□□□ 0.02
NCKIPSD-201ENST00000294129 EPHX1P07099 455 aa15.16■□□□□ 0.02
NCKIPSD-201ENST00000294129 IL3P08700 152 aa15.16■□□□□ 0.02
NCKIPSD-201ENST00000294129 POU2F1P14859 743 aa15.16■□□□□ 0.02
NCKIPSD-201ENST00000294129 GP2P55259 537 aaKnown RBP15.16■□□□□ 0.02
NCKIPSD-201ENST00000294129 KCNJ10P78508 379 aa15.16■□□□□ 0.02
NCKIPSD-201ENST00000294129 TCEA2Q15560 299 aa15.16■□□□□ 0.02
NCKIPSD-201ENST00000294129 PRSS53Q2L4Q9 553 aa15.16■□□□□ 0.02
NCKIPSD-201ENST00000294129 FAM78AQ5JUQ0 283 aa15.16■□□□□ 0.02
NCKIPSD-201ENST00000294129 GTF2IRD2BQ6EKJ0 949 aa15.16■□□□□ 0.02
NCKIPSD-201ENST00000294129 ADGRD2Q7Z7M1 963 aa15.16■□□□□ 0.02
NCKIPSD-201ENST00000294129 GTF2IRD2Q86UP8 949 aa15.16■□□□□ 0.02
NCKIPSD-201ENST00000294129 STARD8Q92502 1023 aa15.16■□□□□ 0.02
NCKIPSD-201ENST00000294129 KLK6Q92876 244 aa15.16■□□□□ 0.02
NCKIPSD-201ENST00000294129 REPS1Q96D71 796 aa15.16■□□□□ 0.02
NCKIPSD-201ENST00000294129 MIEF1Q9NQG6 463 aa15.16■□□□□ 0.02
NCKIPSD-201ENST00000294129 CDH7Q9ULB5 785 aa15.16■□□□□ 0.02
NCKIPSD-201ENST00000294129 SH3GLB1Q9Y371 365 aa15.16■□□□□ 0.02
NCKIPSD-201ENST00000294129 TRANK1O15050 2925 aa15.16■□□□□ 0.02
NCKIPSD-201ENST00000294129 SH3PXD2BA1X283 911 aa15.15■□□□□ 0.02
NCKIPSD-201ENST00000294129 UGT2B11O75310 529 aa15.15■□□□□ 0.02
NCKIPSD-201ENST00000294129 IL1RNP18510 177 aa15.15■□□□□ 0.02
NCKIPSD-201ENST00000294129 PSMB5P28074 263 aa15.15■□□□□ 0.02
NCKIPSD-201ENST00000294129 HOXA9P31269 272 aa15.15■□□□□ 0.02
NCKIPSD-201ENST00000294129 MLLT10P55197 1068 aa15.15■□□□□ 0.02
NCKIPSD-201ENST00000294129 FPGSQ05932 587 aa15.15■□□□□ 0.02
NCKIPSD-201ENST00000294129 AQP6Q13520 282 aa15.15■□□□□ 0.02
NCKIPSD-201ENST00000294129 CAMK2GQ13555 558 aaPredicted RBP15.15■□□□□ 0.02
NCKIPSD-201ENST00000294129 CKAP5Q14008 2032 aa15.15■□□□□ 0.02
NCKIPSD-201ENST00000294129 HNRNPA1L2Q32P51 320 aaKnown RBP15.15■□□□□ 0.02
NCKIPSD-201ENST00000294129 PAGE2BQ5JRK9 111 aa15.15■□□□□ 0.02
NCKIPSD-201ENST00000294129 AHSA2Q719I0 299 aa15.15■□□□□ 0.02
NCKIPSD-201ENST00000294129 NLRP8Q86W28 1048 aa15.15■□□□□ 0.02
NCKIPSD-201ENST00000294129 NRSN1Q8IZ57 195 aa15.15■□□□□ 0.02
NCKIPSD-201ENST00000294129 TERB1Q8NA31 727 aa15.15■□□□□ 0.02
NCKIPSD-201ENST00000294129 ZNF784Q8NCA9 323 aaPredicted RBP15.15■□□□□ 0.02
NCKIPSD-201ENST00000294129 C16orf78Q8WTQ4 265 aa15.15■□□□□ 0.02
NCKIPSD-201ENST00000294129 RAB2BQ8WUD1 216 aa15.15■□□□□ 0.02
NCKIPSD-201ENST00000294129 ARMC7Q9H6L4 198 aa15.15■□□□□ 0.02
NCKIPSD-201ENST00000294129 NFKBIL1Q9UBC1 381 aaPredicted RBP15.15■□□□□ 0.02
NCKIPSD-201ENST00000294129 SLC23A2Q9UGH3 650 aa15.15■□□□□ 0.02
NCKIPSD-201ENST00000294129 TAC3Q9UHF0 121 aa15.15■□□□□ 0.02
NCKIPSD-201ENST00000294129 J3KTA2 159 aa15.15■□□□□ 0.02
NCKIPSD-201ENST00000294129 M0QX08 132 aa15.15■□□□□ 0.02
NCKIPSD-201ENST00000294129 NDUFS2O75306 463 aa15.15■□□□□ 0.02
NCKIPSD-201ENST00000294129 SERPIND1P05546 499 aa15.15■□□□□ 0.02
NCKIPSD-201ENST00000294129 JUNBP17275 347 aaPredicted RBP15.15■□□□□ 0.02
NCKIPSD-201ENST00000294129 ITGB7P26010 798 aa15.15■□□□□ 0.02
NCKIPSD-201ENST00000294129 TMBIM6P55061 237 aa15.15■□□□□ 0.02
NCKIPSD-201ENST00000294129 CDH12P55289 794 aa15.15■□□□□ 0.02
NCKIPSD-201ENST00000294129 RPP38P78345 283 aaKnown RBP15.15■□□□□ 0.02
NCKIPSD-201ENST00000294129 MPEG1Q2M385 716 aa15.15■□□□□ 0.02
NCKIPSD-201ENST00000294129 TMEM240Q5SV17 173 aa15.15■□□□□ 0.02
NCKIPSD-201ENST00000294129 C16orf87Q6PH81 154 aa15.15■□□□□ 0.02
NCKIPSD-201ENST00000294129 GET4Q7L5D6 327 aaPredicted RBP15.15■□□□□ 0.02
NCKIPSD-201ENST00000294129 SETD9Q8NE22 299 aa15.15■□□□□ 0.02
NCKIPSD-201ENST00000294129 GIPC3Q8TF64 312 aa15.15■□□□□ 0.02
NCKIPSD-201ENST00000294129 MAGED4Q96JG8 741 aa15.15■□□□□ 0.02
NCKIPSD-201ENST00000294129 TRIT1Q9H3H1 467 aaKnown RBP15.15■□□□□ 0.02
NCKIPSD-201ENST00000294129 PRDM8Q9NQV8 689 aa15.15■□□□□ 0.02
NCKIPSD-201ENST00000294129 ZNF282Q9UDV7 671 aaPredicted RBP15.15■□□□□ 0.02
NCKIPSD-201ENST00000294129 BTNL2Q9UIR0 455 aa15.15■□□□□ 0.02
NCKIPSD-201ENST00000294129 FEZF1A0PJY2 475 aa15.15■□□□□ 0.02
NCKIPSD-201ENST00000294129 M0R129 80 aa15.15■□□□□ 0.02
NCKIPSD-201ENST00000294129 SH3BP5O60239 455 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms