RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 GNB5O14775 395 aa11.46□□□□□ -0.57
SYNGAP1-201ENST00000293748 IRAK2O43187 625 aa11.46□□□□□ -0.57
SYNGAP1-201ENST00000293748 GATBO75879 557 aaKnown RBP11.46□□□□□ -0.57
SYNGAP1-201ENST00000293748 KELP23276 732 aa11.46□□□□□ -0.57
SYNGAP1-201ENST00000293748 HCAR3P49019 387 aa11.46□□□□□ -0.57
SYNGAP1-201ENST00000293748 RPL19P84098 196 aaKnown RBP11.46□□□□□ -0.57
SYNGAP1-201ENST00000293748 POM121L1PQ3SYA9 428 aa11.46□□□□□ -0.57
SYNGAP1-201ENST00000293748 PRSS36Q5K4E3 855 aa11.46□□□□□ -0.57
SYNGAP1-201ENST00000293748 ATXN7L2Q5T6C5 722 aaPredicted RBP11.46□□□□□ -0.57
SYNGAP1-201ENST00000293748 PAQR9Q6ZVX9 377 aa11.46□□□□□ -0.57
SYNGAP1-201ENST00000293748 INO80EQ8NBZ0 244 aaPredicted RBP11.46□□□□□ -0.57
SYNGAP1-201ENST00000293748 NEK7Q8TDX7 302 aa11.46□□□□□ -0.57
SYNGAP1-201ENST00000293748 ZNF431Q8TF32 576 aaPredicted RBP11.46□□□□□ -0.57
SYNGAP1-201ENST00000293748 OR51V1Q9H2C8 321 aa11.46□□□□□ -0.57
SYNGAP1-201ENST00000293748 FARSBQ9NSD9 589 aaKnown RBP11.46□□□□□ -0.57
SYNGAP1-201ENST00000293748 IMP3Q9NV31 184 aaKnown RBP11.46□□□□□ -0.57
SYNGAP1-201ENST00000293748 MARK1Q9P0L2 795 aa11.46□□□□□ -0.57
SYNGAP1-201ENST00000293748 PCDHGB6Q9Y5F9 930 aa11.46□□□□□ -0.57
SYNGAP1-201ENST00000293748 NLRC5Q86WI3 1866 aa11.46□□□□□ -0.58
SYNGAP1-201ENST00000293748 C2orf78A6NCI8 922 aa11.46□□□□□ -0.58
SYNGAP1-201ENST00000293748 YJEFN3A6XGL0 299 aa11.46□□□□□ -0.58
SYNGAP1-201ENST00000293748 CACNB4O00305 520 aaPredicted RBP11.46□□□□□ -0.58
SYNGAP1-201ENST00000293748 XPNPEP2O43895 674 aa11.46□□□□□ -0.58
SYNGAP1-201ENST00000293748 BEST1O76090 585 aa11.46□□□□□ -0.58
SYNGAP1-201ENST00000293748 GRIA1P42261 906 aa11.46□□□□□ -0.58
SYNGAP1-201ENST00000293748 GBX2P52951 348 aaPredicted RBP11.46□□□□□ -0.58
SYNGAP1-201ENST00000293748 TXNL4AP83876 142 aaKnown RBP11.46□□□□□ -0.58
SYNGAP1-201ENST00000293748 DNASE1L3Q13609 305 aa11.46□□□□□ -0.58
SYNGAP1-201ENST00000293748 TSTQ16762 297 aaKnown RBP11.46□□□□□ -0.58
SYNGAP1-201ENST00000293748 UBAP2Q5T6F2 1119 aaKnown RBP11.46□□□□□ -0.58
SYNGAP1-201ENST00000293748 PAQR3Q6TCH7 311 aa11.46□□□□□ -0.58
SYNGAP1-201ENST00000293748 PHYKPLQ8IUZ5 450 aa11.46□□□□□ -0.58
SYNGAP1-201ENST00000293748 SLC44A3Q8N4M1 653 aa11.46□□□□□ -0.58
SYNGAP1-201ENST00000293748 ZNF615Q8N8J6 731 aa11.46□□□□□ -0.58
SYNGAP1-201ENST00000293748 ZMIZ2Q8NF64 920 aa11.46□□□□□ -0.58
SYNGAP1-201ENST00000293748 TRUB1Q8WWH5 349 aaKnown RBP11.46□□□□□ -0.58
SYNGAP1-201ENST00000293748 FBXL20Q96IG2 436 aa11.46□□□□□ -0.58
SYNGAP1-201ENST00000293748 HAPLN3Q96S86 360 aa11.46□□□□□ -0.58
SYNGAP1-201ENST00000293748 CYP2S1Q96SQ9 504 aa11.46□□□□□ -0.58
SYNGAP1-201ENST00000293748 PRRX2Q99811 253 aa11.46□□□□□ -0.58
SYNGAP1-201ENST00000293748 PHPT1Q9NRX4 125 aaPredicted RBP11.46□□□□□ -0.58
SYNGAP1-201ENST00000293748 WNT6Q9Y6F9 365 aa11.46□□□□□ -0.58
SYNGAP1-201ENST00000293748 L7N2F9 121 aa11.45□□□□□ -0.58
SYNGAP1-201ENST00000293748 DLL1O00548 723 aa11.45□□□□□ -0.58
SYNGAP1-201ENST00000293748 PDPK1O15530 556 aa11.45□□□□□ -0.58
SYNGAP1-201ENST00000293748 ARL6IP5O75915 188 aa11.45□□□□□ -0.58
SYNGAP1-201ENST00000293748 GSTT2P0CG29 244 aa11.45□□□□□ -0.58
SYNGAP1-201ENST00000293748 SCARB2Q14108 478 aa11.45□□□□□ -0.58
SYNGAP1-201ENST00000293748 PCLAFQ15004 111 aa11.45□□□□□ -0.58
SYNGAP1-201ENST00000293748 EIPR1Q53HC9 387 aa11.45□□□□□ -0.58
SYNGAP1-201ENST00000293748 KIAA1614Q5VZ46 1190 aa11.45□□□□□ -0.58
SYNGAP1-201ENST00000293748 PM20D1Q6GTS8 502 aa11.45□□□□□ -0.58
SYNGAP1-201ENST00000293748 ASB18Q6ZVZ8 466 aa11.45□□□□□ -0.58
SYNGAP1-201ENST00000293748 TREML1Q86YW5 311 aa11.45□□□□□ -0.58
SYNGAP1-201ENST00000293748 PHC2Q8IXK0 858 aa11.45□□□□□ -0.58
SYNGAP1-201ENST00000293748 WFIKKN2Q8TEU8 576 aa11.45□□□□□ -0.58
SYNGAP1-201ENST00000293748 CREB3L1Q96BA8 519 aa11.45□□□□□ -0.58
SYNGAP1-201ENST00000293748 SLC29A3Q9BZD2 475 aa11.45□□□□□ -0.58
SYNGAP1-201ENST00000293748 BRINP2Q9C0B6 783 aa11.45□□□□□ -0.58
SYNGAP1-201ENST00000293748 IL21Q9HBE4 155 aa11.45□□□□□ -0.58
SYNGAP1-201ENST00000293748 MUTYHQ9UIF7 546 aa11.45□□□□□ -0.58
SYNGAP1-201ENST00000293748 ALG5Q9Y673 324 aa11.45□□□□□ -0.58
SYNGAP1-201ENST00000293748 USP3Q9Y6I4 520 aa11.45□□□□□ -0.58
SYNGAP1-201ENST00000293748 LOC730098B7Z3J9 87 aa11.45□□□□□ -0.58
SYNGAP1-201ENST00000293748 ITGA10O75578 1167 aa11.45□□□□□ -0.58
SYNGAP1-201ENST00000293748 SIX3O95343 332 aaPredicted RBP11.45□□□□□ -0.58
SYNGAP1-201ENST00000293748 PRH1P02810 166 aa11.45□□□□□ -0.58
SYNGAP1-201ENST00000293748 IL7RP16871 459 aa11.45□□□□□ -0.58
SYNGAP1-201ENST00000293748 HSPB3Q12988 150 aa11.45□□□□□ -0.58
SYNGAP1-201ENST00000293748 SF1Q15637 639 aaKnown RBP11.45□□□□□ -0.58
SYNGAP1-201ENST00000293748 ZCCHC12Q6PEW1 402 aa11.45□□□□□ -0.58
SYNGAP1-201ENST00000293748 FAM3CQ92520 227 aa11.45□□□□□ -0.58
SYNGAP1-201ENST00000293748 PYURFQ96I23 114 aa11.45□□□□□ -0.58
SYNGAP1-201ENST00000293748 C5orf34Q96MH7 638 aa11.45□□□□□ -0.58
SYNGAP1-201ENST00000293748 IL4I1Q96RQ9 567 aa11.45□□□□□ -0.58
SYNGAP1-201ENST00000293748 CLCC1Q96S66 551 aa11.45□□□□□ -0.58
SYNGAP1-201ENST00000293748 TRPV4Q9HBA0 871 aa11.45□□□□□ -0.58
SYNGAP1-201ENST00000293748 IFT46Q9NQC8 304 aa11.45□□□□□ -0.58
SYNGAP1-201ENST00000293748 SPATA7Q9P0W8 599 aa11.45□□□□□ -0.58
SYNGAP1-201ENST00000293748 SLC17A6Q9P2U8 582 aa11.45□□□□□ -0.58
SYNGAP1-201ENST00000293748 A0A1W2PRB8 838 aa11.45□□□□□ -0.58
SYNGAP1-201ENST00000293748 PI15O43692 258 aa11.45□□□□□ -0.58
SYNGAP1-201ENST00000293748 CPN2P22792 545 aa11.45□□□□□ -0.58
SYNGAP1-201ENST00000293748 MEP1AQ16819 746 aa11.45□□□□□ -0.58
SYNGAP1-201ENST00000293748 GPR33Q49SQ1 333 aa11.45□□□□□ -0.58
SYNGAP1-201ENST00000293748 MSS51Q4VC12 460 aa11.45□□□□□ -0.58
SYNGAP1-201ENST00000293748 IQCF2Q8IXL9 164 aa11.45□□□□□ -0.58
SYNGAP1-201ENST00000293748 CADM2Q8N3J6 435 aa11.45□□□□□ -0.58
SYNGAP1-201ENST00000293748 ZNF548Q8NEK5 533 aaPredicted RBP11.45□□□□□ -0.58
SYNGAP1-201ENST00000293748 OR7D4Q8NG98 312 aa11.45□□□□□ -0.58
SYNGAP1-201ENST00000293748 KCNC2Q96PR1 638 aa11.45□□□□□ -0.58
SYNGAP1-201ENST00000293748 P2RY13Q9BPV8 354 aa11.45□□□□□ -0.58
SYNGAP1-201ENST00000293748 PCBD2Q9H0N5 130 aa11.45□□□□□ -0.58
SYNGAP1-201ENST00000293748 SMG9Q9H0W8 520 aaKnown RBP11.45□□□□□ -0.58
SYNGAP1-201ENST00000293748 SMOC2Q9H3U7 446 aa11.45□□□□□ -0.58
SYNGAP1-201ENST00000293748 RIMKLBQ9ULI2 386 aa11.45□□□□□ -0.58
SYNGAP1-201ENST00000293748 TLR6Q9Y2C9 796 aa11.45□□□□□ -0.58
SYNGAP1-201ENST00000293748 FBP2O00757 339 aa11.45□□□□□ -0.58
SYNGAP1-201ENST00000293748 CHRNA4P43681 627 aa11.45□□□□□ -0.58
SYNGAP1-201ENST00000293748 RING1Q06587 406 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms