RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 RNF13O43567 381 aa16.72■□□□□ 0.27
SHANK1-201ENST00000293441 CHP2O43745 196 aa16.72■□□□□ 0.27
SHANK1-201ENST00000293441 ACRV1P26436 265 aa16.72■□□□□ 0.27
SHANK1-201ENST00000293441 CLRN1P58418 232 aa16.72■□□□□ 0.27
SHANK1-201ENST00000293441 MERTKQ12866 999 aa16.72■□□□□ 0.27
SHANK1-201ENST00000293441 PDCD4Q53EL6 469 aaKnown RBP16.72■□□□□ 0.27
SHANK1-201ENST00000293441 SPANXN4Q5MJ08 99 aa16.72■□□□□ 0.27
SHANK1-201ENST00000293441 OR2T5Q6IEZ7 315 aa16.72■□□□□ 0.27
SHANK1-201ENST00000293441 ARL9Q6T311 187 aa16.72■□□□□ 0.27
SHANK1-201ENST00000293441 PIGWQ7Z7B1 504 aa16.72■□□□□ 0.27
SHANK1-201ENST00000293441 OR4K14Q8NGD5 310 aa16.72■□□□□ 0.27
SHANK1-201ENST00000293441 OR2T29Q8NH02 315 aa16.72■□□□□ 0.27
SHANK1-201ENST00000293441 RAB7BQ96AH8 199 aa16.72■□□□□ 0.27
SHANK1-201ENST00000293441 CD180Q99467 661 aa16.72■□□□□ 0.27
SHANK1-201ENST00000293441 FAM120CQ9NX05 1096 aaKnown RBP16.72■□□□□ 0.27
SHANK1-201ENST00000293441 GNG8Q9UK08 70 aa16.72■□□□□ 0.27
SHANK1-201ENST00000293441 GSRP00390 522 aa16.72■□□□□ 0.27
SHANK1-201ENST00000293441 ZNF678Q5SXM1 525 aa16.72■□□□□ 0.27
SHANK1-201ENST00000293441 CCDC116Q8IYX3 515 aa16.72■□□□□ 0.27
SHANK1-201ENST00000293441 IL22RA1Q8N6P7 574 aa16.72■□□□□ 0.27
SHANK1-201ENST00000293441 FCGR1BQ92637 280 aa16.72■□□□□ 0.27
SHANK1-201ENST00000293441 SMARCD2Q92925 531 aa16.72■□□□□ 0.27
SHANK1-201ENST00000293441 GMLQ99445 158 aa16.72■□□□□ 0.27
SHANK1-201ENST00000293441 ZNF221Q9UK13 617 aa16.72■□□□□ 0.27
SHANK1-201ENST00000293441 PCDHGB1Q9Y5G3 927 aa16.72■□□□□ 0.27
SHANK1-201ENST00000293441 STYXL1Q9Y6J8 313 aa16.72■□□□□ 0.27
SHANK1-201ENST00000293441 A0A1W2PPL8 197 aa16.71■□□□□ 0.27
SHANK1-201ENST00000293441 A0A1W2PRQ8 180 aa16.71■□□□□ 0.27
SHANK1-201ENST00000293441 KCNC3Q14003 757 aa16.71■□□□□ 0.27
SHANK1-201ENST00000293441 COL9A2Q14055 689 aaPredicted RBP16.71■□□□□ 0.27
SHANK1-201ENST00000293441 TRAM1L1Q8N609 369 aa16.71■□□□□ 0.27
SHANK1-201ENST00000293441 TXNDC5Q8NBS9 432 aaKnown RBP16.71■□□□□ 0.27
SHANK1-201ENST00000293441 TPT1P8Q9HAU6 139 aa16.71■□□□□ 0.27
SHANK1-201ENST00000293441 RHCGQ9UBD6 479 aa16.71■□□□□ 0.27
SHANK1-201ENST00000293441 AQP12BA6NM10 295 aa16.71■□□□□ 0.27
SHANK1-201ENST00000293441 TEX46H3BTG2 121 aa16.71■□□□□ 0.27
SHANK1-201ENST00000293441 SOX14O95416 240 aa16.71■□□□□ 0.27
SHANK1-201ENST00000293441 ITGA5P08648 1049 aa16.71■□□□□ 0.27
SHANK1-201ENST00000293441 FBLP22087 321 aaKnown RBP16.71■□□□□ 0.27
SHANK1-201ENST00000293441 ARSJQ5FYB0 599 aaPredicted RBP16.71■□□□□ 0.27
SHANK1-201ENST00000293441 AQP12AQ8IXF9 295 aa16.71■□□□□ 0.27
SHANK1-201ENST00000293441 ZNF615Q8N8J6 731 aa16.71■□□□□ 0.27
SHANK1-201ENST00000293441 OR4K1Q8NGD4 311 aa16.71■□□□□ 0.27
SHANK1-201ENST00000293441 DNAJA3Q96EY1 480 aa16.71■□□□□ 0.27
SHANK1-201ENST00000293441 MAGEE1Q9HCI5 957 aa16.71■□□□□ 0.27
SHANK1-201ENST00000293441 OR9I1Q8NGQ6 314 aa16.71■□□□□ 0.27
SHANK1-201ENST00000293441 ASB9Q96DX5 294 aa16.71■□□□□ 0.27
SHANK1-201ENST00000293441 LRCH3Q96II8 777 aa16.71■□□□□ 0.27
SHANK1-201ENST00000293441 SP140LQ9H930 580 aa16.71■□□□□ 0.27
SHANK1-201ENST00000293441 WDR45Q9Y484 360 aa16.71■□□□□ 0.27
SHANK1-201ENST00000293441 ARFGEF2Q9Y6D5 1785 aa16.71■□□□□ 0.27
SHANK1-201ENST00000293441 SOX1O00570 391 aaPredicted RBP16.71■□□□□ 0.27
SHANK1-201ENST00000293441 CBFA2T3O75081 653 aa16.71■□□□□ 0.27
SHANK1-201ENST00000293441 ZNF763Q0D2J5 394 aa16.71■□□□□ 0.27
SHANK1-201ENST00000293441 CCDC80Q76M96 950 aa16.71■□□□□ 0.27
SHANK1-201ENST00000293441 TEPSINQ96N21 525 aa16.71■□□□□ 0.27
SHANK1-201ENST00000293441 TAS2R1Q9NYW7 299 aa16.71■□□□□ 0.27
SHANK1-201ENST00000293441 PCDHGA2Q9Y5H1 932 aa16.71■□□□□ 0.27
SHANK1-201ENST00000293441 E7EQ34 232 aa16.71■□□□□ 0.27
SHANK1-201ENST00000293441 FLYWCH1Q4VC44 716 aa16.71■□□□□ 0.27
SHANK1-201ENST00000293441 TAS2R9Q9NYW1 312 aa16.71■□□□□ 0.27
SHANK1-201ENST00000293441 KAT7O95251 611 aa16.7■□□□□ 0.26
SHANK1-201ENST00000293441 ITGB1P05556 798 aa16.7■□□□□ 0.26
SHANK1-201ENST00000293441 CD36P16671 472 aa16.7■□□□□ 0.26
SHANK1-201ENST00000293441 DHCR24Q15392 516 aa16.7■□□□□ 0.26
SHANK1-201ENST00000293441 JAGN1Q8N5M9 183 aa16.7■□□□□ 0.26
SHANK1-201ENST00000293441 PXYLP1Q8TE99 480 aa16.7■□□□□ 0.26
SHANK1-201ENST00000293441 RAB8BQ92930 207 aa16.7■□□□□ 0.26
SHANK1-201ENST00000293441 HSH2DQ96JZ2 352 aa16.7■□□□□ 0.26
SHANK1-201ENST00000293441 PTCHD1Q96NR3 888 aa16.7■□□□□ 0.26
SHANK1-201ENST00000293441 ANKRA2Q9H9E1 313 aa16.7■□□□□ 0.26
SHANK1-201ENST00000293441 C5orf51A6NDU8 294 aa16.7■□□□□ 0.26
SHANK1-201ENST00000293441 HCKP08631 526 aa16.7■□□□□ 0.26
SHANK1-201ENST00000293441 GRIA2P42262 883 aa16.7■□□□□ 0.26
SHANK1-201ENST00000293441 NRROSQ86YC3 692 aa16.7■□□□□ 0.26
SHANK1-201ENST00000293441 ZNF548Q8NEK5 533 aaPredicted RBP16.7■□□□□ 0.26
SHANK1-201ENST00000293441 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.7■□□□□ 0.26
SHANK1-201ENST00000293441 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.7■□□□□ 0.26
SHANK1-201ENST00000293441 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.7■□□□□ 0.26
SHANK1-201ENST00000293441 ZNF840PA6NDX5 716 aa16.7■□□□□ 0.26
SHANK1-201ENST00000293441 VIPR2P41587 438 aa16.7■□□□□ 0.26
SHANK1-201ENST00000293441 POU6F2P78424 691 aaPredicted RBP16.7■□□□□ 0.26
SHANK1-201ENST00000293441 NPTX1Q15818 432 aa16.7■□□□□ 0.26
SHANK1-201ENST00000293441 ASPGQ86U10 573 aa16.7■□□□□ 0.26
SHANK1-201ENST00000293441 MARCH9Q86YJ5 346 aa16.7■□□□□ 0.26
SHANK1-201ENST00000293441 DDX1Q92499 740 aaKnown RBP16.7■□□□□ 0.26
SHANK1-201ENST00000293441 GIMAP2Q9UG22 337 aa16.7■□□□□ 0.26
SHANK1-201ENST00000293441 MAFFQ9ULX9 164 aa16.7■□□□□ 0.26
SHANK1-201ENST00000293441 MAN2B1O00754 1011 aa16.7■□□□□ 0.26
SHANK1-201ENST00000293441 CREG1O75629 220 aa16.7■□□□□ 0.26
SHANK1-201ENST00000293441 SYNGR4O95473 234 aa16.7■□□□□ 0.26
SHANK1-201ENST00000293441 XRCC1P18887 633 aaPredicted RBP16.7■□□□□ 0.26
SHANK1-201ENST00000293441 ROR2Q01974 943 aaKnown RBP16.7■□□□□ 0.26
SHANK1-201ENST00000293441 ALPK1Q96QP1 1244 aa16.7■□□□□ 0.26
SHANK1-201ENST00000293441 PAK6Q9NQU5 681 aaPredicted RBP16.7■□□□□ 0.26
SHANK1-201ENST00000293441 TRNAU1APQ9NX07 287 aaKnown RBP16.7■□□□□ 0.26
SHANK1-201ENST00000293441 PFDN2Q9UHV9 154 aa16.7■□□□□ 0.26
SHANK1-201ENST00000293441 PMF1-BGLAPU3KQ54 211 aa16.7■□□□□ 0.26
SHANK1-201ENST00000293441 TGM5O43548 720 aa16.7■□□□□ 0.26
SHANK1-201ENST00000293441 STC2O76061 302 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms