RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 KMT5CQ86Y97 462 aa8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 C10orf82Q8WW14 230 aa8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 AIF1LQ9BQI0 150 aa8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 MRPS30Q9NP92 439 aaKnown RBP8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 SIRT5Q9NXA8 310 aa8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 ASIC5Q9NY37 505 aa8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 ACTR10Q9NZ32 417 aa8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 ZNF225Q9UK10 706 aa8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 SLC9A8Q9Y2E8 581 aa8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 RNF215Q9Y6U7 377 aa8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 TRBC2A0A5B9 178 aa8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 E7EQ34 232 aa8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 MANBAO00462 879 aa8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 SLC22A2O15244 555 aa8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 PPM1DO15297 605 aa8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 SNX3O60493 162 aa8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 HLA-DQA2P01906 255 aa8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 UGT2B7P16662 529 aa8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 CCNA2P20248 432 aa8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 MAPK10P53779 464 aa8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 COPZ1P61923 177 aa8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 STX4Q12846 297 aa8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 BNIP3Q12983 259 aa8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 KHDRBS2Q5VWX1 349 aaKnown RBP8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 LETMD1Q6P1Q0 360 aa8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 ZNF621Q6ZSS3 439 aa8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 R3HCC1LQ7Z5L2 792 aaKnown RBP8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 SLC35F3Q8IY50 421 aa8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 ZCCHC10Q8TBK6 192 aa8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 ZNF473Q8WTR7 871 aaKnown RBP8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 SELENOMQ8WWX9 145 aa8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 NEIL2Q969S2 332 aa8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 OR2A14Q96R47 310 aa8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 SLCO1B3Q9NPD5 702 aa8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 PCDHGA11Q9Y5H2 935 aa8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 BTN3A3O00478 584 aa8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 DUX1O43812 170 aa8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 ANKRD34CP0C6C1 535 aa8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 AHRP35869 848 aa8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 GDF5P43026 501 aa8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 LIMK1P53667 647 aa8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 MAZP56270 477 aaKnown RBP8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 AASDHQ4L235 1098 aaPredicted RBP8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 XKR6Q5GH73 641 aa8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 ZNF425Q6IV72 752 aa8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 MED27Q6P2C8 311 aa8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 ZNF655Q8N720 491 aaPredicted RBP8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 PCYOX1LQ8NBM8 494 aa8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 TWIST2Q8WVJ9 160 aa8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 ATOH1Q92858 354 aaPredicted RBP8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 IL17FQ96PD4 163 aa8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 KCNK13Q9HB14 408 aa8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 FANCEQ9HB96 536 aa8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 TAC3Q9UHF0 121 aa8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 GTPBP1O00178 669 aaKnown RBP8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 TPD52L2O43399 206 aaKnown RBP8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 SDC3O75056 442 aa8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 MSL3P1P0C860 447 aa8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 ACP1P24666 158 aa8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 SERPINB3P29508 390 aa8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 GSTM5P46439 218 aa8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 ATP4BP51164 291 aa8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 RPS15AP62244 130 aaKnown RBP8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 CHIT1Q13231 466 aa8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 STX19Q8N4C7 294 aa8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 DCBLD1Q8N8Z6 715 aa8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 OR52B6Q8NGF0 335 aa8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 C19orf60Q96EN9 201 aa8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 ZDHHC12Q96GR4 267 aa8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 DCBLD2Q96PD2 775 aa8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 SEMA6CQ9H3T2 930 aa8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 SLC12A4Q9UP95 1085 aa8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 COL27A1Q8IZC6 1860 aaPredicted RBP8.08□□□□□ -1.12
PTPDC1-201ENST00000288976 SIGLEC6O43699 453 aa8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 OR4F21O95013 312 aa8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 PROS1P07225 676 aa8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 PRR35P0CG20 571 aa8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 TYRP1P17643 537 aa8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 ANXA11P50995 505 aaKnown RBP8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 ILKQ13418 452 aa8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 DOC2AQ14183 400 aa8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 ATP6AP1LQ52LC2 224 aa8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 FBXO48Q5FWF7 155 aa8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 METTL21CQ5VZV1 264 aa8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 FAM91A1Q658Y4 838 aa8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 MFSD9Q8NBP5 474 aa8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 OR4E2Q8NGC2 313 aa8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 FCRL1Q96LA6 429 aa8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 IL21RQ9HBE5 538 aa8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 SLC6A20Q9NP91 592 aa8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 EQTNQ9NQ60 294 aa8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 PNPOQ9NVS9 261 aa8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 GID8Q9NWU2 228 aa8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 ARL2BPQ9Y2Y0 163 aa8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 TMED5Q9Y3A6 229 aa8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 USP34Q70CQ2 3546 aa8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 PLCE1Q9P212 2302 aa8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 LNP1A1A4G5 178 aa8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 OR2A25A4D2G3 310 aa8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 OR6C74A6NCV1 312 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms