RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 RENP00797 406 aa10.88□□□□□ -0.67
USP6NL-201ENST00000277575 JUPP14923 745 aa10.88□□□□□ -0.67
USP6NL-201ENST00000277575 MATN1P21941 496 aa10.88□□□□□ -0.67
USP6NL-201ENST00000277575 VSX2P58304 361 aaPredicted RBP10.88□□□□□ -0.67
USP6NL-201ENST00000277575 RPP38P78345 283 aaKnown RBP10.88□□□□□ -0.67
USP6NL-201ENST00000277575 ZNF267Q14586 743 aaPredicted RBP10.88□□□□□ -0.67
USP6NL-201ENST00000277575 DEFB134Q4QY38 66 aa10.88□□□□□ -0.67
USP6NL-201ENST00000277575 CYBRD1Q53TN4 286 aa10.88□□□□□ -0.67
USP6NL-201ENST00000277575 ZNF542PQ5EBM4 170 aa10.88□□□□□ -0.67
USP6NL-201ENST00000277575 ZFAND4Q86XD8 727 aa10.88□□□□□ -0.67
USP6NL-201ENST00000277575 SLC22A15Q8IZD6 547 aa10.88□□□□□ -0.67
USP6NL-201ENST00000277575 MRPL43Q8N983 215 aaKnown RBP10.88□□□□□ -0.67
USP6NL-201ENST00000277575 GIN1Q9NXP7 522 aa10.88□□□□□ -0.67
USP6NL-201ENST00000277575 NKX1-2Q9UD57 310 aaPredicted RBP10.88□□□□□ -0.67
USP6NL-201ENST00000277575 RIMKLBQ9ULI2 386 aa10.88□□□□□ -0.67
USP6NL-201ENST00000277575 MYH9P35579 1960 aaKnown RBP10.88□□□□□ -0.67
USP6NL-201ENST00000277575 JUNDP17535 347 aa10.88□□□□□ -0.67
USP6NL-201ENST00000277575 ACVR2AP27037 513 aa10.88□□□□□ -0.67
USP6NL-201ENST00000277575 AAK1Q2M2I8 961 aa10.88□□□□□ -0.67
USP6NL-201ENST00000277575 LINC00471Q8N535 108 aa10.88□□□□□ -0.67
USP6NL-201ENST00000277575 LRRC17Q8N6Y2 441 aa10.88□□□□□ -0.67
USP6NL-201ENST00000277575 PHOSPHO1Q8TCT1 267 aa10.88□□□□□ -0.67
USP6NL-201ENST00000277575 TMEM174Q8WUU8 243 aa10.88□□□□□ -0.67
USP6NL-201ENST00000277575 MMABQ96EY8 250 aaPredicted RBP10.88□□□□□ -0.67
USP6NL-201ENST00000277575 SLC46A2Q9BY10 475 aa10.88□□□□□ -0.67
USP6NL-201ENST00000277575 FZD3Q9NPG1 666 aa10.88□□□□□ -0.67
USP6NL-201ENST00000277575 LYARQ9NX58 379 aaKnown RBP10.88□□□□□ -0.67
USP6NL-201ENST00000277575 MTMR10Q9NXD2 777 aa10.88□□□□□ -0.67
USP6NL-201ENST00000277575 FAM170BA6NMN3 283 aa10.88□□□□□ -0.67
USP6NL-201ENST00000277575 DFNA5O60443 496 aa10.88□□□□□ -0.67
USP6NL-201ENST00000277575 RCBTB2O95199 551 aa10.88□□□□□ -0.67
USP6NL-201ENST00000277575 IFNA6P05013 189 aa10.88□□□□□ -0.67
USP6NL-201ENST00000277575 AZGP1P25311 298 aaKnown RBP10.88□□□□□ -0.67
USP6NL-201ENST00000277575 MTTPP55157 894 aa10.88□□□□□ -0.67
USP6NL-201ENST00000277575 ABATP80404 500 aa10.88□□□□□ -0.67
USP6NL-201ENST00000277575 ABRAXAS2Q15018 415 aa10.88□□□□□ -0.67
USP6NL-201ENST00000277575 ZNF789Q5FWF6 425 aa10.88□□□□□ -0.67
USP6NL-201ENST00000277575 OGFOD2Q6N063 350 aa10.88□□□□□ -0.67
USP6NL-201ENST00000277575 SCML4Q8N228 414 aa10.88□□□□□ -0.67
USP6NL-201ENST00000277575 CHCHD4Q8N4Q1 142 aa10.88□□□□□ -0.67
USP6NL-201ENST00000277575 RAB2BQ8WUD1 216 aa10.88□□□□□ -0.67
USP6NL-201ENST00000277575 TBX5Q99593 518 aa10.88□□□□□ -0.67
USP6NL-201ENST00000277575 PDCD10Q9BUL8 212 aa10.88□□□□□ -0.67
USP6NL-201ENST00000277575 C8orf33Q9H7E9 229 aaPredicted RBP10.88□□□□□ -0.67
USP6NL-201ENST00000277575 OR1A2Q9Y585 309 aa10.88□□□□□ -0.67
USP6NL-201ENST00000277575 PCDHGB7Q9Y5F8 929 aa10.88□□□□□ -0.67
USP6NL-201ENST00000277575 PTGDR2Q9Y5Y4 395 aa10.88□□□□□ -0.67
USP6NL-201ENST00000277575 OR6C74A6NCV1 312 aa10.87□□□□□ -0.67
USP6NL-201ENST00000277575 AURKAO14965 403 aa10.87□□□□□ -0.67
USP6NL-201ENST00000277575 CPNE3O75131 537 aaKnown RBP10.87□□□□□ -0.67
USP6NL-201ENST00000277575 FAUP35544 74 aaKnown RBP10.87□□□□□ -0.67
USP6NL-201ENST00000277575 SYT16Q17RD7 645 aa10.87□□□□□ -0.67
USP6NL-201ENST00000277575 RNASE12Q5GAN4 147 aaKnown RBP10.87□□□□□ -0.67
USP6NL-201ENST00000277575 KDELC1Q6UW63 502 aa10.87□□□□□ -0.67
USP6NL-201ENST00000277575 ASPGQ86U10 573 aa10.87□□□□□ -0.67
USP6NL-201ENST00000277575 SATL1Q86VE3 508 aa10.87□□□□□ -0.67
USP6NL-201ENST00000277575 ARHGAP12Q8IWW6 846 aa10.87□□□□□ -0.67
USP6NL-201ENST00000277575 KRTCAP2Q8N6L1 136 aa10.87□□□□□ -0.67
USP6NL-201ENST00000277575 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.87□□□□□ -0.67
USP6NL-201ENST00000277575 UFD1Q92890 307 aa10.87□□□□□ -0.67
USP6NL-201ENST00000277575 ZSWIM3Q96MP5 696 aa10.87□□□□□ -0.67
USP6NL-201ENST00000277575 ALPK1Q96QP1 1244 aa10.87□□□□□ -0.67
USP6NL-201ENST00000277575 F2RL3Q96RI0 385 aa10.87□□□□□ -0.67
USP6NL-201ENST00000277575 KLF16Q9BXK1 252 aaPredicted RBP10.87□□□□□ -0.67
USP6NL-201ENST00000277575 RBCK1Q9BYM8 510 aa10.87□□□□□ -0.67
USP6NL-201ENST00000277575 COMMD4Q9H0A8 199 aa10.87□□□□□ -0.67
USP6NL-201ENST00000277575 AIG1Q9NVV5 245 aa10.87□□□□□ -0.67
USP6NL-201ENST00000277575 APOBEC3BQ9UH17 382 aaKnown RBP10.87□□□□□ -0.67
USP6NL-201ENST00000277575 DNAJC15Q9Y5T4 150 aa10.87□□□□□ -0.67
USP6NL-201ENST00000277575 SPIN1Q9Y657 262 aaPredicted RBP10.87□□□□□ -0.67
USP6NL-201ENST00000277575 USP54Q70EL1 1684 aa10.87□□□□□ -0.67
USP6NL-201ENST00000277575 ZNF99A8MXY4 864 aaPredicted RBP10.87□□□□□ -0.67
USP6NL-201ENST00000277575 TLR4O00206 839 aa10.87□□□□□ -0.67
USP6NL-201ENST00000277575 TNFRSF10BO14763 440 aa10.87□□□□□ -0.67
USP6NL-201ENST00000277575 NPC1O15118 1278 aa10.87□□□□□ -0.67
USP6NL-201ENST00000277575 FAM189A1O60320 539 aa10.87□□□□□ -0.67
USP6NL-201ENST00000277575 DHFRP00374 187 aa10.87□□□□□ -0.67
USP6NL-201ENST00000277575 RLN1P04808 185 aa10.87□□□□□ -0.67
USP6NL-201ENST00000277575 IL3P08700 152 aa10.87□□□□□ -0.67
USP6NL-201ENST00000277575 PRKACGP22612 351 aa10.87□□□□□ -0.67
USP6NL-201ENST00000277575 KCNC4Q03721 635 aa10.87□□□□□ -0.67
USP6NL-201ENST00000277575 NFE2L1Q14494 772 aa10.87□□□□□ -0.67
USP6NL-201ENST00000277575 NPTX1Q15818 432 aa10.87□□□□□ -0.67
USP6NL-201ENST00000277575 SPATS1Q496A3 300 aa10.87□□□□□ -0.67
USP6NL-201ENST00000277575 FBXO43Q4G163 708 aa10.87□□□□□ -0.67
USP6NL-201ENST00000277575 MPP7Q5T2T1 576 aa10.87□□□□□ -0.67
USP6NL-201ENST00000277575 ATG14Q6ZNE5 492 aa10.87□□□□□ -0.67
USP6NL-201ENST00000277575 PAQR9Q6ZVX9 377 aa10.87□□□□□ -0.67
USP6NL-201ENST00000277575 OR52E4Q8NGH9 312 aa10.87□□□□□ -0.67
USP6NL-201ENST00000277575 JPH3Q8WXH2 748 aaPredicted RBP10.87□□□□□ -0.67
USP6NL-201ENST00000277575 FUBP1Q96AE4 644 aaKnown RBP10.87□□□□□ -0.67
USP6NL-201ENST00000277575 ZDHHC12Q96GR4 267 aa10.87□□□□□ -0.67
USP6NL-201ENST00000277575 UCK2Q9BZX2 261 aa10.87□□□□□ -0.67
USP6NL-201ENST00000277575 GDE1Q9NZC3 331 aa10.87□□□□□ -0.67
USP6NL-201ENST00000277575 FAM221BA6H8Z2 402 aa10.87□□□□□ -0.67
USP6NL-201ENST00000277575 NPIPB15A6NHN6 443 aaPredicted RBP10.87□□□□□ -0.67
USP6NL-201ENST00000277575 DRGXA6NNA5 263 aa10.87□□□□□ -0.67
USP6NL-201ENST00000277575 RPLP0P05388 317 aaKnown RBP10.87□□□□□ -0.67
USP6NL-201ENST00000277575 CD9P21926 228 aa10.87□□□□□ -0.67
USP6NL-201ENST00000277575 SLC6A4P31645 630 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms