RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 ZBED6CLQ96FA7 236 aaPredicted RBP13.83□□□□□ -0.2
TMEM47-201ENST00000275954 Q96MT0 163 aa13.83□□□□□ -0.2
TMEM47-201ENST00000275954 POLR2J3Q9H1A7 115 aaKnown RBP13.83□□□□□ -0.2
TMEM47-201ENST00000275954 FAM120CQ9NX05 1096 aaKnown RBP13.83□□□□□ -0.2
TMEM47-201ENST00000275954 NPPAP01160 153 aa13.83□□□□□ -0.2
TMEM47-201ENST00000275954 BMP2P12643 396 aa13.83□□□□□ -0.2
TMEM47-201ENST00000275954 HMGA1P17096 107 aaKnown RBP13.83□□□□□ -0.2
TMEM47-201ENST00000275954 FPR1P21462 350 aa13.83□□□□□ -0.2
TMEM47-201ENST00000275954 DSTNP60981 165 aa13.83□□□□□ -0.2
TMEM47-201ENST00000275954 CATSPEREQ5SY80 951 aa13.83□□□□□ -0.2
TMEM47-201ENST00000275954 C6orf141Q5SZD1 244 aa13.83□□□□□ -0.2
TMEM47-201ENST00000275954 PLEKHM3Q6ZWE6 761 aa13.83□□□□□ -0.2
TMEM47-201ENST00000275954 WFIKKN2Q8TEU8 576 aa13.83□□□□□ -0.2
TMEM47-201ENST00000275954 BIRC8Q96P09 236 aa13.83□□□□□ -0.2
TMEM47-201ENST00000275954 KRCC1Q9NPI7 259 aaPredicted RBP13.83□□□□□ -0.2
TMEM47-201ENST00000275954 CROCCQ5TZA2 2017 aa13.82□□□□□ -0.2
TMEM47-201ENST00000275954 A0A0J9YVX5 310 aa13.82□□□□□ -0.2
TMEM47-201ENST00000275954 PRLP01236 227 aa13.82□□□□□ -0.2
TMEM47-201ENST00000275954 ETFAP13804 333 aa13.82□□□□□ -0.2
TMEM47-201ENST00000275954 ZNF10P21506 573 aaPredicted RBP13.82□□□□□ -0.2
TMEM47-201ENST00000275954 AVPR1BP47901 424 aa13.82□□□□□ -0.2
TMEM47-201ENST00000275954 TRAF7Q6Q0C0 670 aa13.82□□□□□ -0.2
TMEM47-201ENST00000275954 SMARCD3Q6STE5 483 aa13.82□□□□□ -0.2
TMEM47-201ENST00000275954 ZNF438Q7Z4V0 828 aa13.82□□□□□ -0.2
TMEM47-201ENST00000275954 UBE2J2Q8N2K1 259 aa13.82□□□□□ -0.2
TMEM47-201ENST00000275954 DPP10Q8N608 796 aa13.82□□□□□ -0.2
TMEM47-201ENST00000275954 SLC38A2Q96QD8 506 aa13.82□□□□□ -0.2
TMEM47-201ENST00000275954 F2RL3Q96RI0 385 aa13.82□□□□□ -0.2
TMEM47-201ENST00000275954 UHRF1Q96T88 793 aaPredicted RBP13.82□□□□□ -0.2
TMEM47-201ENST00000275954 CWH43Q9H720 699 aa13.82□□□□□ -0.2
TMEM47-201ENST00000275954 SFXN1Q9H9B4 322 aa13.82□□□□□ -0.2
TMEM47-201ENST00000275954 RIMKLBQ9ULI2 386 aa13.82□□□□□ -0.2
TMEM47-201ENST00000275954 YBX2Q9Y2T7 364 aaKnown RBP13.82□□□□□ -0.2
TMEM47-201ENST00000275954 PLOD2O00469 737 aa13.82□□□□□ -0.2
TMEM47-201ENST00000275954 GMFGO60234 142 aa13.82□□□□□ -0.2
TMEM47-201ENST00000275954 RB1P06400 928 aa13.82□□□□□ -0.2
TMEM47-201ENST00000275954 MAP2K4P45985 399 aa13.82□□□□□ -0.2
TMEM47-201ENST00000275954 DHPSP49366 369 aaPredicted RBP13.82□□□□□ -0.2
TMEM47-201ENST00000275954 HK3P52790 923 aa13.82□□□□□ -0.2
TMEM47-201ENST00000275954 ZNF763Q0D2J5 394 aa13.82□□□□□ -0.2
TMEM47-201ENST00000275954 MRPL28Q13084 256 aaKnown RBP13.82□□□□□ -0.2
TMEM47-201ENST00000275954 ZNF846Q147U1 533 aa13.82□□□□□ -0.2
TMEM47-201ENST00000275954 LASP1Q14847 261 aaKnown RBP13.82□□□□□ -0.2
TMEM47-201ENST00000275954 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.82□□□□□ -0.2
TMEM47-201ENST00000275954 OR4E2Q8NGC2 313 aa13.82□□□□□ -0.2
TMEM47-201ENST00000275954 ZNF419Q96HQ0 510 aaPredicted RBP13.82□□□□□ -0.2
TMEM47-201ENST00000275954 ACPTQ9BZG2 426 aa13.82□□□□□ -0.2
TMEM47-201ENST00000275954 MRPS30Q9NP92 439 aaKnown RBP13.82□□□□□ -0.2
TMEM47-201ENST00000275954 DNAJC13O75165 2243 aa13.82□□□□□ -0.2
TMEM47-201ENST00000275954 CLDN25C9JDP6 229 aa13.82□□□□□ -0.2
TMEM47-201ENST00000275954 TBX1O43435 398 aa13.82□□□□□ -0.2
TMEM47-201ENST00000275954 KAT7O95251 611 aa13.82□□□□□ -0.2
TMEM47-201ENST00000275954 TFAP2AP05549 437 aa13.82□□□□□ -0.2
TMEM47-201ENST00000275954 JUPP14923 745 aa13.82□□□□□ -0.2
TMEM47-201ENST00000275954 PDHA2P29803 388 aa13.82□□□□□ -0.2
TMEM47-201ENST00000275954 CCR8P51685 355 aa13.82□□□□□ -0.2
TMEM47-201ENST00000275954 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.82□□□□□ -0.2
TMEM47-201ENST00000275954 TMEM203Q969S6 136 aa13.82□□□□□ -0.2
TMEM47-201ENST00000275954 SLC35G5Q96KT7 338 aa13.82□□□□□ -0.2
TMEM47-201ENST00000275954 SPACA7Q96KW9 195 aa13.82□□□□□ -0.2
TMEM47-201ENST00000275954 KAT8Q9H7Z6 458 aaKnown RBP13.82□□□□□ -0.2
TMEM47-201ENST00000275954 TRIM39Q9HCM9 518 aa13.82□□□□□ -0.2
TMEM47-201ENST00000275954 PALMDQ9NP74 551 aa13.82□□□□□ -0.2
TMEM47-201ENST00000275954 PTGFRNQ9P2B2 879 aa13.82□□□□□ -0.2
TMEM47-201ENST00000275954 RP1P56715 2156 aa13.82□□□□□ -0.2
TMEM47-201ENST00000275954 ZNFX1Q9P2E3 1918 aaKnown RBP13.81□□□□□ -0.2
TMEM47-201ENST00000275954 A0A096LPI6 279 aa13.81□□□□□ -0.2
TMEM47-201ENST00000275954 A0A1B0GVG6 124 aa13.81□□□□□ -0.2
TMEM47-201ENST00000275954 ACOT8O14734 319 aa13.81□□□□□ -0.2
TMEM47-201ENST00000275954 PTGER1P34995 402 aa13.81□□□□□ -0.2
TMEM47-201ENST00000275954 POLR2IP36954 125 aaKnown RBP13.81□□□□□ -0.2
TMEM47-201ENST00000275954 TRIQKQ629K1 86 aa13.81□□□□□ -0.2
TMEM47-201ENST00000275954 DNAJB8Q8NHS0 232 aa13.81□□□□□ -0.2
TMEM47-201ENST00000275954 CYP8B1Q9UNU6 501 aa13.81□□□□□ -0.2
TMEM47-201ENST00000275954 FEZF1A0PJY2 475 aa13.81□□□□□ -0.2
TMEM47-201ENST00000275954 LRRC72A6NJI9 287 aa13.81□□□□□ -0.2
TMEM47-201ENST00000275954 KLF8O95600 359 aaPredicted RBP13.81□□□□□ -0.2
TMEM47-201ENST00000275954 PENKP01210 267 aaPredicted RBP13.81□□□□□ -0.2
TMEM47-201ENST00000275954 IL3P08700 152 aa13.81□□□□□ -0.2
TMEM47-201ENST00000275954 PTX3P26022 381 aaPredicted RBP13.81□□□□□ -0.2
TMEM47-201ENST00000275954 MAOBP27338 520 aa13.81□□□□□ -0.2
TMEM47-201ENST00000275954 MCCD1P59942 119 aaPredicted RBP13.81□□□□□ -0.2
TMEM47-201ENST00000275954 RPS3AP61247 264 aaKnown RBP13.81□□□□□ -0.2
TMEM47-201ENST00000275954 VBP1P61758 197 aa13.81□□□□□ -0.2
TMEM47-201ENST00000275954 C1orf61Q13536 156 aa13.81□□□□□ -0.2
TMEM47-201ENST00000275954 SLC9A5Q14940 896 aa13.81□□□□□ -0.2
TMEM47-201ENST00000275954 FAM26DQ5JW98 314 aa13.81□□□□□ -0.2
TMEM47-201ENST00000275954 TSTD1Q8NFU3 115 aa13.81□□□□□ -0.2
TMEM47-201ENST00000275954 ADAMTS19Q8TE59 1207 aa13.81□□□□□ -0.2
TMEM47-201ENST00000275954 FAR1Q8WVX9 515 aa13.81□□□□□ -0.2
TMEM47-201ENST00000275954 TTLL2Q9BWV7 592 aa13.81□□□□□ -0.2
TMEM47-201ENST00000275954 GTPBP2Q9BX10 602 aaKnown RBP13.81□□□□□ -0.2
TMEM47-201ENST00000275954 SLC12A9Q9BXP2 914 aa13.81□□□□□ -0.2
TMEM47-201ENST00000275954 RSPH9Q9H1X1 276 aaPredicted RBP13.81□□□□□ -0.2
TMEM47-201ENST00000275954 ZNF696Q9H7X3 374 aa13.81□□□□□ -0.2
TMEM47-201ENST00000275954 HEMK1Q9Y5R4 338 aaPredicted RBP13.81□□□□□ -0.2
TMEM47-201ENST00000275954 TCRBV3S1A0A5B6 114 aa13.81□□□□□ -0.2
TMEM47-201ENST00000275954 SMIM30A4D0T7 59 aa13.81□□□□□ -0.2
TMEM47-201ENST00000275954 IGLON5A6NGN9 336 aa13.81□□□□□ -0.2
TMEM47-201ENST00000275954 EFCAB9A8MZ26 197 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms