RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 GNAO1P09471 354 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 BNIP3Q12983 259 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 SIRPB2Q5JXA9 342 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 C3orf33Q6P1S2 294 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 SLC15A3Q8IY34 581 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 ZSCAN4Q8NAM6 433 aaPredicted RBP7.73□□□□□ -1.17
LIMD1-201ENST00000273317 NFKBIDQ8NI38 313 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 PEX13Q92968 403 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 TSSK6Q9BXA6 273 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 SIX2Q9NPC8 291 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 C9JVG2 144 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 CDRT1O95170 752 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 ITGA5P08648 1049 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 ZNF14P17017 642 aaPredicted RBP7.73□□□□□ -1.17
LIMD1-201ENST00000273317 VAMP1P23763 118 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 HRH2P25021 359 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 ASCC1Q8N9N2 400 aaKnown RBP7.73□□□□□ -1.17
LIMD1-201ENST00000273317 BIRC7Q96CA5 298 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 TMEM121BQ9BXQ6 578 aaPredicted RBP7.73□□□□□ -1.17
LIMD1-201ENST00000273317 Q9N2J8 555 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 PCDHGA12O60330 932 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 DNAJB6O75190 326 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 PLGP00747 810 aaPredicted RBP7.73□□□□□ -1.17
LIMD1-201ENST00000273317 CSTBP04080 98 aaKnown RBP7.73□□□□□ -1.17
LIMD1-201ENST00000273317 IL7P13232 177 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 ATP1B2P14415 290 aaPredicted RBP7.73□□□□□ -1.17
LIMD1-201ENST00000273317 CD47Q08722 323 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 AIMP2Q13155 320 aaKnown RBP7.73□□□□□ -1.17
LIMD1-201ENST00000273317 DHCR24Q15392 516 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 CHRFAM7AQ494W8 412 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 CEACAM20Q6UY09 585 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 DDX60Q8IY21 1712 aaKnown RBP7.73□□□□□ -1.17
LIMD1-201ENST00000273317 C2CD4AQ8NCU7 369 aaPredicted RBP7.73□□□□□ -1.17
LIMD1-201ENST00000273317 CANT1Q8WVQ1 401 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 EBF4Q9BQW3 602 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 IFT52Q9Y366 437 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 PCDHB14Q9Y5E9 798 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 KDM3BQ7LBC6 1761 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 GAS6Q14393 721 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 CMPK2Q5EBM0 449 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 PIGGQ5H8A4 983 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 ATG9BQ674R7 924 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 CILP2Q8IUL8 1156 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 SLC35B2Q8TB61 432 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 ALPK1Q96QP1 1244 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 GPR88Q9GZN0 384 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 PNO1Q9NRX1 252 aaKnown RBP7.73□□□□□ -1.17
LIMD1-201ENST00000273317 UNC119BA6NIH7 251 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 H7C417 338 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 RNF225M0QZC1 329 aaPredicted RBP7.73□□□□□ -1.17
LIMD1-201ENST00000273317 RHDQ02161 417 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 ZNF423Q2M1K9 1284 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 ADGRF1Q5T601 910 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 C6orf183Q5T699 404 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 ZNF598Q86UK7 904 aaKnown RBP7.73□□□□□ -1.17
LIMD1-201ENST00000273317 UBQLNLQ8IYU4 475 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 ZNF717Q9BY31 904 aaPredicted RBP7.73□□□□□ -1.17
LIMD1-201ENST00000273317 ACSS2Q9NR19 701 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 MS4A12Q9NXJ0 267 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 CD84Q9UIB8 345 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 NOX1Q9Y5S8 564 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 HSPE1-MOB4S4R3N1 261 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 MED1Q15648 1581 aaPredicted RBP7.73□□□□□ -1.17
LIMD1-201ENST00000273317 SLC16A5O15375 505 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 FCER2P06734 321 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 TUBG1P23258 451 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 CFL1P23528 166 aaKnown RBP7.73□□□□□ -1.17
LIMD1-201ENST00000273317 VIPR1P32241 457 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 RBMXP38159 391 aaKnown RBP7.73□□□□□ -1.17
LIMD1-201ENST00000273317 MAGEA8P43361 318 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 CLCA4Q14CN2 919 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 GLT8D1Q68CQ7 371 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 VITQ6UXI7 678 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 ZNF280BQ86YH2 543 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 TRIM43Q96BQ3 446 aaPredicted RBP7.73□□□□□ -1.17
LIMD1-201ENST00000273317 ZNF317Q96PQ6 595 aaPredicted RBP7.73□□□□□ -1.17
LIMD1-201ENST00000273317 SCML2Q9UQR0 700 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 CPQQ9Y646 472 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 A0A096LPI6 279 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 BRCC3P46736 316 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 SOX9P48436 509 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 KLF1Q13351 362 aaPredicted RBP7.73□□□□□ -1.17
LIMD1-201ENST00000273317 CDK10Q15131 360 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 CTC1Q2NKJ3 1217 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 FAM156AQ8NDB6 213 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 PLEKHO2Q8TD55 490 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 MEAF6Q9HAF1 191 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 CLCA3PQ9Y6N3 262 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 EIF1AYO14602 144 aaKnown RBP7.73□□□□□ -1.17
LIMD1-201ENST00000273317 FLRT2O43155 660 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 HSPA12AO43301 675 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 GJB1P08034 283 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 AGXTP21549 392 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 EIF1AXP47813 144 aaKnown RBP7.73□□□□□ -1.17
LIMD1-201ENST00000273317 RAB5BP61020 215 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 LRRTM4Q86VH4 590 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 THOC6Q86W42 341 aaKnown RBP7.73□□□□□ -1.17
LIMD1-201ENST00000273317 PLA2G15Q8NCC3 412 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 SLC5A11Q8WWX8 675 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 OR52B2Q96RD2 323 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms