RNA–Protein interactions for RNA: ENST00000273156.11

SEC22C-202, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,608 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-202ENST00000273156 AIG1Q9NVV5 245 aa17.07■□□□□ 0.32
SEC22C-202ENST00000273156 EIF3LQ9Y262 564 aaKnown RBP17.07■□□□□ 0.32
SEC22C-202ENST00000273156 ANKRD12Q6UB98 2062 aa17.07■□□□□ 0.32
SEC22C-202ENST00000273156 LOC400499M0QZD8 3231 aa17.07■□□□□ 0.32
SEC22C-202ENST00000273156 PRAMEF33A0A0G2JMD5 474 aa17.07■□□□□ 0.32
SEC22C-202ENST00000273156 B4E171 279 aa17.07■□□□□ 0.32
SEC22C-202ENST00000273156 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.07■□□□□ 0.32
SEC22C-202ENST00000273156 PRAMEF10O60809 474 aa17.07■□□□□ 0.32
SEC22C-202ENST00000273156 RSL1D1O76021 490 aaKnown RBP17.07■□□□□ 0.32
SEC22C-202ENST00000273156 VIPP01282 170 aa17.07■□□□□ 0.32
SEC22C-202ENST00000273156 CD22P20273 847 aa17.07■□□□□ 0.32
SEC22C-202ENST00000273156 GPX3P22352 226 aa17.07■□□□□ 0.32
SEC22C-202ENST00000273156 VARSP26640 1264 aaKnown RBP17.07■□□□□ 0.32
SEC22C-202ENST00000273156 TSPAN7P41732 249 aa17.07■□□□□ 0.32
SEC22C-202ENST00000273156 NEK2P51955 445 aa17.07■□□□□ 0.32
SEC22C-202ENST00000273156 RAB15P59190 212 aa17.07■□□□□ 0.32
SEC22C-202ENST00000273156 C17orf64Q86WR6 236 aa17.07■□□□□ 0.32
SEC22C-202ENST00000273156 PLXDC1Q8IUK5 500 aa17.07■□□□□ 0.32
SEC22C-202ENST00000273156 LMNTD1Q8N9Z9 388 aa17.07■□□□□ 0.32
SEC22C-202ENST00000273156 RCBTB1Q8NDN9 531 aa17.07■□□□□ 0.32
SEC22C-202ENST00000273156 OR2L8Q8NGY9 312 aa17.07■□□□□ 0.32
SEC22C-202ENST00000273156 WDR20Q8TBZ3 569 aa17.07■□□□□ 0.32
SEC22C-202ENST00000273156 UBE2E3Q969T4 207 aa17.07■□□□□ 0.32
SEC22C-202ENST00000273156 DDA1Q9BW61 102 aa17.07■□□□□ 0.32
SEC22C-202ENST00000273156 PRM3Q9NNZ6 103 aa17.07■□□□□ 0.32
SEC22C-202ENST00000273156 TMEM45AQ9NWC5 275 aa17.07■□□□□ 0.32
SEC22C-202ENST00000273156 C1orf109Q9NX04 203 aa17.07■□□□□ 0.32
SEC22C-202ENST00000273156 NOP53Q9NZM5 478 aaKnown RBP17.07■□□□□ 0.32
SEC22C-202ENST00000273156 CCDC167Q9P0B6 97 aa17.07■□□□□ 0.32
SEC22C-202ENST00000273156 GPR45Q9Y5Y3 372 aa17.07■□□□□ 0.32
SEC22C-202ENST00000273156 SEC22BO75396 215 aa17.06■□□□□ 0.32
SEC22C-202ENST00000273156 SNRPB2P08579 225 aaKnown RBP17.06■□□□□ 0.32
SEC22C-202ENST00000273156 HSD3B1P14060 373 aa17.06■□□□□ 0.32
SEC22C-202ENST00000273156 PCSK2P16519 638 aa17.06■□□□□ 0.32
SEC22C-202ENST00000273156 HSD3B2P26439 372 aa17.06■□□□□ 0.32
SEC22C-202ENST00000273156 PKLRP30613 574 aa17.06■□□□□ 0.32
SEC22C-202ENST00000273156 CSF2RBP32927 897 aa17.06■□□□□ 0.32
SEC22C-202ENST00000273156 DIO3P55073 304 aa17.06■□□□□ 0.32
SEC22C-202ENST00000273156 KCNJ2P63252 427 aa17.06■□□□□ 0.32
SEC22C-202ENST00000273156 UBE2IP63279 158 aaKnown RBP17.06■□□□□ 0.32
SEC22C-202ENST00000273156 HMGCS1Q01581 520 aa17.06■□□□□ 0.32
SEC22C-202ENST00000273156 CSTF3Q12996 717 aaKnown RBP17.06■□□□□ 0.32
SEC22C-202ENST00000273156 CATSPEREQ5SY80 951 aa17.06■□□□□ 0.32
SEC22C-202ENST00000273156 RBM15BQ8NDT2 890 aaKnown RBP17.06■□□□□ 0.32
SEC22C-202ENST00000273156 SLC39A7Q92504 469 aa17.06■□□□□ 0.32
SEC22C-202ENST00000273156 NCSTNQ92542 709 aa17.06■□□□□ 0.32
SEC22C-202ENST00000273156 TEFMQ96QE5 360 aaKnown RBP17.06■□□□□ 0.32
SEC22C-202ENST00000273156 ACPTQ9BZG2 426 aa17.06■□□□□ 0.32
SEC22C-202ENST00000273156 BRINP2Q9C0B6 783 aa17.06■□□□□ 0.32
SEC22C-202ENST00000273156 EFCAB1Q9HAE3 211 aa17.06■□□□□ 0.32
SEC22C-202ENST00000273156 POT1Q9NUX5 634 aa17.06■□□□□ 0.32
SEC22C-202ENST00000273156 TAC3Q9UHF0 121 aa17.06■□□□□ 0.32
SEC22C-202ENST00000273156 AHCTF1Q8WYP5 2266 aa17.06■□□□□ 0.32
SEC22C-202ENST00000273156 C9orf172C9J069 976 aa17.05■□□□□ 0.32
SEC22C-202ENST00000273156 NPIPB8E9PQR5 432 aa17.05■□□□□ 0.32
SEC22C-202ENST00000273156 STMND1H3BQB6 276 aa17.05■□□□□ 0.32
SEC22C-202ENST00000273156 GSC2O15499 205 aa17.05■□□□□ 0.32
SEC22C-202ENST00000273156 PRPH2P23942 346 aa17.05■□□□□ 0.32
SEC22C-202ENST00000273156 CXCR2P25025 360 aa17.05■□□□□ 0.32
SEC22C-202ENST00000273156 SHMT2P34897 504 aa17.05■□□□□ 0.32
SEC22C-202ENST00000273156 ETV5P41161 510 aa17.05■□□□□ 0.32
SEC22C-202ENST00000273156 CFHR1Q03591 330 aa17.05■□□□□ 0.32
SEC22C-202ENST00000273156 CUL3Q13618 768 aa17.05■□□□□ 0.32
SEC22C-202ENST00000273156 SLBPQ14493 270 aaKnown RBP eCLIP17.05■□□□□ 0.32
SEC22C-202ENST00000273156 RFTN2Q52LD8 501 aaPredicted RBP17.05■□□□□ 0.32
SEC22C-202ENST00000273156 PDCD4Q53EL6 469 aaKnown RBP17.05■□□□□ 0.32
SEC22C-202ENST00000273156 CACHD1Q5VU97 1274 aa17.05■□□□□ 0.32
SEC22C-202ENST00000273156 IL23RQ5VWK5 629 aa17.05■□□□□ 0.32
SEC22C-202ENST00000273156 PAOXQ6QHF9 649 aa17.05■□□□□ 0.32
SEC22C-202ENST00000273156 ZFAND4Q86XD8 727 aa17.05■□□□□ 0.32
SEC22C-202ENST00000273156 ZNF761Q86XN6 746 aaPredicted RBP17.05■□□□□ 0.32
SEC22C-202ENST00000273156 KRT78Q8N1N4 520 aa17.05■□□□□ 0.32
SEC22C-202ENST00000273156 ARHGAP24Q8N264 748 aa17.05■□□□□ 0.32
SEC22C-202ENST00000273156 OR7G3Q8NG95 312 aa17.05■□□□□ 0.32
SEC22C-202ENST00000273156 ZFPM2Q8WW38 1151 aa17.05■□□□□ 0.32
SEC22C-202ENST00000273156 MCUR1Q96AQ8 359 aa17.05■□□□□ 0.32
SEC22C-202ENST00000273156 CMTM7Q96FZ5 175 aa17.05■□□□□ 0.32
SEC22C-202ENST00000273156 BBC3Q96PG8 261 aaPredicted RBP17.05■□□□□ 0.32
SEC22C-202ENST00000273156 C1orf50Q9BV19 199 aa17.05■□□□□ 0.32
SEC22C-202ENST00000273156 SLC25A23Q9BV35 468 aa17.05■□□□□ 0.32
SEC22C-202ENST00000273156 ACAT2Q9BWD1 397 aa17.05■□□□□ 0.32
SEC22C-202ENST00000273156 PELI2Q9HAT8 420 aa17.05■□□□□ 0.32
SEC22C-202ENST00000273156 BRF2Q9HAW0 419 aa17.05■□□□□ 0.32
SEC22C-202ENST00000273156 ZNF624Q9P2J8 865 aaPredicted RBP17.05■□□□□ 0.32
SEC22C-202ENST00000273156 ZFC3H1O60293 1989 aaKnown RBP17.05■□□□□ 0.32
SEC22C-202ENST00000273156 PCNAP12004 261 aa17.04■□□□□ 0.32
SEC22C-202ENST00000273156 CCL4P13236 92 aa17.04■□□□□ 0.32
SEC22C-202ENST00000273156 RPL38P63173 70 aaKnown RBP17.04■□□□□ 0.32
SEC22C-202ENST00000273156 MANEAQ5SRI9 462 aa17.04■□□□□ 0.32
SEC22C-202ENST00000273156 DCAF12Q5T6F0 453 aa17.04■□□□□ 0.32
SEC22C-202ENST00000273156 GK5Q6ZS86 529 aa17.04■□□□□ 0.32
SEC22C-202ENST00000273156 TMEM26Q6ZUK4 368 aa17.04■□□□□ 0.32
SEC22C-202ENST00000273156 LINC01555Q8NAE3 123 aa17.04■□□□□ 0.32
SEC22C-202ENST00000273156 ZSCAN1Q8NBB4 408 aa17.04■□□□□ 0.32
SEC22C-202ENST00000273156 ZPBPQ9BS86 351 aa17.04■□□□□ 0.32
SEC22C-202ENST00000273156 MRPL1Q9BYD6 325 aaKnown RBP17.04■□□□□ 0.32
SEC22C-202ENST00000273156 MMADHCQ9H3L0 296 aaPredicted RBP17.04■□□□□ 0.32
SEC22C-202ENST00000273156 XKR8Q9H6D3 395 aa17.04■□□□□ 0.32
SEC22C-202ENST00000273156 WDR70Q9NW82 654 aa17.04■□□□□ 0.32
SEC22C-202ENST00000273156 GEMIN8Q9NWZ8 242 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms