RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 OR6C65A6NJZ3 312 aa12.88□□□□□ -0.35
PRDM16-201ENST00000270722 ZNF821O75541 412 aaPredicted RBP12.88□□□□□ -0.35
PRDM16-201ENST00000270722 RPL13AP40429 203 aaKnown RBP12.88□□□□□ -0.35
PRDM16-201ENST00000270722 ZMAT1Q5H9K5 638 aa12.88□□□□□ -0.35
PRDM16-201ENST00000270722 BEND4Q6ZU67 534 aa12.88□□□□□ -0.35
PRDM16-201ENST00000270722 KLHL36Q8N4N3 616 aa12.88□□□□□ -0.35
PRDM16-201ENST00000270722 CMTM7Q96FZ5 175 aa12.88□□□□□ -0.35
PRDM16-201ENST00000270722 MAELQ96JY0 434 aaKnown RBP12.88□□□□□ -0.35
PRDM16-201ENST00000270722 EIF5A2Q9GZV4 153 aaKnown RBP12.88□□□□□ -0.35
PRDM16-201ENST00000270722 SMPD3Q9NY59 655 aaPredicted RBP12.88□□□□□ -0.35
PRDM16-201ENST00000270722 SCP2D1Q9UJQ7 156 aa12.88□□□□□ -0.35
PRDM16-201ENST00000270722 hCG_1818297A0A087WSY0 165 aa12.88□□□□□ -0.35
PRDM16-201ENST00000270722 NPEPPSL1A6NEC2 478 aa12.88□□□□□ -0.35
PRDM16-201ENST00000270722 YY2O15391 372 aa12.88□□□□□ -0.35
PRDM16-201ENST00000270722 ADH5P11766 374 aa12.88□□□□□ -0.35
PRDM16-201ENST00000270722 FABP6P51161 128 aa12.88□□□□□ -0.35
PRDM16-201ENST00000270722 LPPQ93052 612 aa12.88□□□□□ -0.35
PRDM16-201ENST00000270722 P2RY11Q96G91 374 aa12.88□□□□□ -0.35
PRDM16-201ENST00000270722 S100A14Q9HCY8 104 aa12.88□□□□□ -0.35
PRDM16-201ENST00000270722 EIF2B3Q9NR50 452 aaKnown RBP12.88□□□□□ -0.35
PRDM16-201ENST00000270722 AK6Q9Y3D8 172 aaKnown RBP12.88□□□□□ -0.35
PRDM16-201ENST00000270722 ANGPTL7O43827 346 aa12.88□□□□□ -0.35
PRDM16-201ENST00000270722 SCGB1D1O95968 90 aa12.88□□□□□ -0.35
PRDM16-201ENST00000270722 FAM163BP0C2L3 166 aa12.88□□□□□ -0.35
PRDM16-201ENST00000270722 RAB3AP20336 220 aa12.88□□□□□ -0.35
PRDM16-201ENST00000270722 HLA-FP30511 346 aa12.88□□□□□ -0.35
PRDM16-201ENST00000270722 CRHR1P34998 444 aa12.88□□□□□ -0.35
PRDM16-201ENST00000270722 IFI35P80217 286 aaPredicted RBP12.88□□□□□ -0.35
PRDM16-201ENST00000270722 RBPJQ06330 500 aa12.88□□□□□ -0.35
PRDM16-201ENST00000270722 ADAMTS18Q8TE60 1221 aa12.88□□□□□ -0.35
PRDM16-201ENST00000270722 SLC7A6OSQ96CW6 309 aaPredicted RBP12.88□□□□□ -0.35
PRDM16-201ENST00000270722 NODALQ96S42 347 aa12.88□□□□□ -0.35
PRDM16-201ENST00000270722 CHIAQ9BZP6 476 aa12.88□□□□□ -0.35
PRDM16-201ENST00000270722 ABCB7O75027 752 aa12.88□□□□□ -0.35
PRDM16-201ENST00000270722 C14orf28Q4W4Y0 310 aa12.88□□□□□ -0.35
PRDM16-201ENST00000270722 RPL13AP3Q6NVV1 102 aa12.88□□□□□ -0.35
PRDM16-201ENST00000270722 LIX1LQ8IVB5 337 aa12.88□□□□□ -0.35
PRDM16-201ENST00000270722 FAM46DQ8NEK8 389 aa12.88□□□□□ -0.35
PRDM16-201ENST00000270722 KIAA1210Q9ULL0 1709 aa12.88□□□□□ -0.35
PRDM16-201ENST00000270722 RIMS1Q86UR5 1692 aaKnown RBP12.88□□□□□ -0.35
PRDM16-201ENST00000270722 ZNF878C9JN71 531 aa12.88□□□□□ -0.35
PRDM16-201ENST00000270722 BOLA2-SMG1P6H3BVE0 249 aa12.88□□□□□ -0.35
PRDM16-201ENST00000270722 MATN3O15232 486 aa12.88□□□□□ -0.35
PRDM16-201ENST00000270722 HSPB3Q12988 150 aa12.88□□□□□ -0.35
PRDM16-201ENST00000270722 SLC36A3Q495N2 470 aa12.88□□□□□ -0.35
PRDM16-201ENST00000270722 ABLIM2Q6H8Q1 611 aa12.88□□□□□ -0.35
PRDM16-201ENST00000270722 MOB2Q70IA6 237 aa12.88□□□□□ -0.35
PRDM16-201ENST00000270722 VTCN1Q7Z7D3 282 aa12.88□□□□□ -0.35
PRDM16-201ENST00000270722 MARVELD2Q8N4S9 558 aa12.88□□□□□ -0.35
PRDM16-201ENST00000270722 PCDHGA5Q9Y5G8 931 aa12.88□□□□□ -0.35
PRDM16-201ENST00000270722 MEN1O00255 615 aa12.87□□□□□ -0.35
PRDM16-201ENST00000270722 PRDX6P30041 224 aa12.87□□□□□ -0.35
PRDM16-201ENST00000270722 SLC1A3P43003 542 aa12.87□□□□□ -0.35
PRDM16-201ENST00000270722 TMEM126BQ8IUX1 230 aa12.87□□□□□ -0.35
PRDM16-201ENST00000270722 PHTF2Q8N3S3 785 aa12.87□□□□□ -0.35
PRDM16-201ENST00000270722 AGAP2Q99490 1192 aa12.87□□□□□ -0.35
PRDM16-201ENST00000270722 IMPA2O14732 288 aa12.87□□□□□ -0.35
PRDM16-201ENST00000270722 MAXP61244 160 aa12.87□□□□□ -0.35
PRDM16-201ENST00000270722 CTBP1Q13363 440 aa12.87□□□□□ -0.35
PRDM16-201ENST00000270722 KCNMB3Q9NPA1 279 aa12.87□□□□□ -0.35
PRDM16-201ENST00000270722 EXOGQ9Y2C4 368 aaKnown RBP12.87□□□□□ -0.35
PRDM16-201ENST00000270722 BMP8BP34820 402 aa12.87□□□□□ -0.35
PRDM16-201ENST00000270722 ZNF792Q3KQV3 632 aa12.87□□□□□ -0.35
PRDM16-201ENST00000270722 KIAA0895LQ68EN5 471 aa12.87□□□□□ -0.35
PRDM16-201ENST00000270722 BMP8AQ7Z5Y6 402 aa12.87□□□□□ -0.35
PRDM16-201ENST00000270722 G6PC3Q9BUM1 346 aa12.87□□□□□ -0.35
PRDM16-201ENST00000270722 BTRCQ9Y297 605 aa12.87□□□□□ -0.35
PRDM16-201ENST00000270722 NUDT17P0C025 328 aa12.87□□□□□ -0.35
PRDM16-201ENST00000270722 NCBP2P52298 156 aaKnown RBP eCLIP12.87□□□□□ -0.35
PRDM16-201ENST00000270722 BST1Q10588 318 aa12.87□□□□□ -0.35
PRDM16-201ENST00000270722 CAPSQ13938 189 aa12.87□□□□□ -0.35
PRDM16-201ENST00000270722 VARS2Q5ST30 1063 aaKnown RBP12.87□□□□□ -0.35
PRDM16-201ENST00000270722 TLL2Q9Y6L7 1015 aa12.87□□□□□ -0.35
PRDM16-201ENST00000270722 A0A1B0GVI7 797 aa12.87□□□□□ -0.35
PRDM16-201ENST00000270722 STK17BO94768 372 aa12.87□□□□□ -0.35
PRDM16-201ENST00000270722 CLCN4P51793 760 aa12.87□□□□□ -0.35
PRDM16-201ENST00000270722 CSTF1Q05048 431 aaKnown RBP12.87□□□□□ -0.35
PRDM16-201ENST00000270722 ARL6IP1Q15041 203 aa12.87□□□□□ -0.35
PRDM16-201ENST00000270722 BMFQ96LC9 184 aa12.87□□□□□ -0.35
PRDM16-201ENST00000270722 NAA11Q9BSU3 229 aaPredicted RBP12.87□□□□□ -0.35
PRDM16-201ENST00000270722 KAT8Q9H7Z6 458 aaKnown RBP12.87□□□□□ -0.35
PRDM16-201ENST00000270722 ERVK-19Q9WJR5 959 aa12.87□□□□□ -0.35
PRDM16-201ENST00000270722 CPSF4LA6NMK7 179 aaKnown RBP12.87□□□□□ -0.35
PRDM16-201ENST00000270722 YDJCA8MPS7 323 aa12.87□□□□□ -0.35
PRDM16-201ENST00000270722 CDC7O00311 574 aa12.87□□□□□ -0.35
PRDM16-201ENST00000270722 DNAJB5O75953 348 aa12.87□□□□□ -0.35
PRDM16-201ENST00000270722 OAS1P00973 400 aaKnown RBP12.87□□□□□ -0.35
PRDM16-201ENST00000270722 RPS3P23396 243 aaKnown RBP eCLIP12.87□□□□□ -0.35
PRDM16-201ENST00000270722 GSTM2P28161 218 aa12.87□□□□□ -0.35
PRDM16-201ENST00000270722 CD97P48960 835 aa12.87□□□□□ -0.35
PRDM16-201ENST00000270722 MC1RQ01726 317 aa12.87□□□□□ -0.35
PRDM16-201ENST00000270722 ZNF460Q14592 562 aa12.87□□□□□ -0.35
PRDM16-201ENST00000270722 PPP1R35Q8TAP8 253 aa12.87□□□□□ -0.35
PRDM16-201ENST00000270722 GEMIN6Q8WXD5 167 aaKnown RBP12.87□□□□□ -0.35
PRDM16-201ENST00000270722 ZBTB45Q96K62 511 aaPredicted RBP12.87□□□□□ -0.35
PRDM16-201ENST00000270722 HEMK1Q9Y5R4 338 aaPredicted RBP12.87□□□□□ -0.35
PRDM16-201ENST00000270722 TXNL1O43396 289 aa12.87□□□□□ -0.35
PRDM16-201ENST00000270722 GRID2O43424 1007 aa12.87□□□□□ -0.35
PRDM16-201ENST00000270722 PIRTP0C851 137 aa12.87□□□□□ -0.35
PRDM16-201ENST00000270722 CNKSR3Q6P9H4 555 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms