RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 OSGIN2Q9Y236 505 aa9.17□□□□□ -0.94
VPS41-201ENST00000265745 NAALAD2Q9Y3Q0 740 aa9.17□□□□□ -0.94
VPS41-201ENST00000265745 HRH3Q9Y5N1 445 aa9.17□□□□□ -0.94
VPS41-201ENST00000265745 PSAT1Q9Y617 370 aa9.17□□□□□ -0.94
VPS41-201ENST00000265745 UTP20O75691 2785 aaKnown RBP9.16□□□□□ -0.94
VPS41-201ENST00000265745 PABPN1LA6NDY0 278 aaKnown RBP9.16□□□□□ -0.94
VPS41-201ENST00000265745 ZNF860A6NHJ4 632 aa9.16□□□□□ -0.94
VPS41-201ENST00000265745 A8MUI8 341 aa9.16□□□□□ -0.94
VPS41-201ENST00000265745 E7ESA3 106 aa9.16□□□□□ -0.94
VPS41-201ENST00000265745 CCDC188H7C350 402 aa9.16□□□□□ -0.94
VPS41-201ENST00000265745 CDC7O00311 574 aa9.16□□□□□ -0.94
VPS41-201ENST00000265745 NDUFS4O43181 175 aa9.16□□□□□ -0.94
VPS41-201ENST00000265745 LRRTM2O43300 516 aa9.16□□□□□ -0.94
VPS41-201ENST00000265745 STSP08842 583 aa9.16□□□□□ -0.94
VPS41-201ENST00000265745 ZNF37AP17032 561 aaPredicted RBP9.16□□□□□ -0.94
VPS41-201ENST00000265745 ALOX12P18054 663 aa9.16□□□□□ -0.94
VPS41-201ENST00000265745 COL8A1P27658 744 aa9.16□□□□□ -0.94
VPS41-201ENST00000265745 AHRP35869 848 aa9.16□□□□□ -0.94
VPS41-201ENST00000265745 PAFAH1B1P43034 410 aa9.16□□□□□ -0.94
VPS41-201ENST00000265745 AGTR2P50052 363 aa9.16□□□□□ -0.94
VPS41-201ENST00000265745 RHAGQ02094 409 aa9.16□□□□□ -0.94
VPS41-201ENST00000265745 ZNF33BQ06732 778 aa9.16□□□□□ -0.94
VPS41-201ENST00000265745 PDIA2Q13087 525 aaKnown RBP9.16□□□□□ -0.94
VPS41-201ENST00000265745 FASTKD3Q14CZ7 662 aaKnown RBP9.16□□□□□ -0.94
VPS41-201ENST00000265745 ABRAXAS2Q15018 415 aa9.16□□□□□ -0.94
VPS41-201ENST00000265745 NSDHLQ15738 373 aa9.16□□□□□ -0.94
VPS41-201ENST00000265745 INAQ16352 499 aa9.16□□□□□ -0.94
VPS41-201ENST00000265745 PPP1R3AQ16821 1122 aa9.16□□□□□ -0.94
VPS41-201ENST00000265745 BTBD16Q32M84 506 aa9.16□□□□□ -0.94
VPS41-201ENST00000265745 DEFB134Q4QY38 66 aa9.16□□□□□ -0.94
VPS41-201ENST00000265745 ACER2Q5QJU3 275 aa9.16□□□□□ -0.94
VPS41-201ENST00000265745 MFSD4BQ5TF39 518 aa9.16□□□□□ -0.94
VPS41-201ENST00000265745 THOC6Q86W42 341 aaKnown RBP9.16□□□□□ -0.94
VPS41-201ENST00000265745 NKAPQ8N5F7 415 aaKnown RBP9.16□□□□□ -0.94
VPS41-201ENST00000265745 TBC1D19Q8N5T2 526 aa9.16□□□□□ -0.94
VPS41-201ENST00000265745 OR5T3Q8NGG3 340 aa9.16□□□□□ -0.94
VPS41-201ENST00000265745 M1APQ8TC57 530 aa9.16□□□□□ -0.94
VPS41-201ENST00000265745 NT5CQ8TCD5 201 aa9.16□□□□□ -0.94
VPS41-201ENST00000265745 SLC5A11Q8WWX8 675 aa9.16□□□□□ -0.94
VPS41-201ENST00000265745 NR4A3Q92570 626 aa9.16□□□□□ -0.94
VPS41-201ENST00000265745 PEX11GQ96HA9 241 aa9.16□□□□□ -0.94
VPS41-201ENST00000265745 MAGEB10Q96LZ2 347 aaPredicted RBP9.16□□□□□ -0.94
VPS41-201ENST00000265745 DMRTB1Q96MA1 342 aa9.16□□□□□ -0.94
VPS41-201ENST00000265745 NAPGQ99747 312 aaPredicted RBP9.16□□□□□ -0.94
VPS41-201ENST00000265745 MCMBPQ9BTE3 642 aa9.16□□□□□ -0.94
VPS41-201ENST00000265745 TRIM31Q9BZY9 425 aa9.16□□□□□ -0.94
VPS41-201ENST00000265745 MMP25Q9NPA2 562 aa9.16□□□□□ -0.94
VPS41-201ENST00000265745 ZFATQ9P243 1243 aa9.16□□□□□ -0.94
VPS41-201ENST00000265745 RNF14Q9UBS8 474 aa9.16□□□□□ -0.94
VPS41-201ENST00000265745 TEKT2Q9UIF3 430 aa9.16□□□□□ -0.94
VPS41-201ENST00000265745 ZFP69BQ9UJL9 534 aa9.16□□□□□ -0.94
VPS41-201ENST00000265745 SERTM1A2A2V5 107 aa9.15□□□□□ -0.94
VPS41-201ENST00000265745 CTAGE15A4D2H0 777 aa9.15□□□□□ -0.94
VPS41-201ENST00000265745 OR5H15A6NDH6 313 aa9.15□□□□□ -0.94
VPS41-201ENST00000265745 EFCAB8A8MWE9 144 aa9.15□□□□□ -0.94
VPS41-201ENST00000265745 MAGEB17A8MXT2 336 aa9.15□□□□□ -0.94
VPS41-201ENST00000265745 FANCGO15287 622 aa9.15□□□□□ -0.94
VPS41-201ENST00000265745 CHST10O43529 356 aa9.15□□□□□ -0.94
VPS41-201ENST00000265745 PRAMEF2O60811 474 aa9.15□□□□□ -0.94
VPS41-201ENST00000265745 CDC123O75794 336 aaPredicted RBP9.15□□□□□ -0.94
VPS41-201ENST00000265745 B3GALT4O96024 378 aa9.15□□□□□ -0.94
VPS41-201ENST00000265745 UQCRHP07919 91 aa9.15□□□□□ -0.94
VPS41-201ENST00000265745 FHP07954 510 aa9.15□□□□□ -0.94
VPS41-201ENST00000265745 MYBL2P10244 700 aa9.15□□□□□ -0.94
VPS41-201ENST00000265745 SAT1P21673 171 aa9.15□□□□□ -0.94
VPS41-201ENST00000265745 RPL21P46778 160 aaKnown RBP9.15□□□□□ -0.94
VPS41-201ENST00000265745 TDGF1P3P51864 188 aa9.15□□□□□ -0.94
VPS41-201ENST00000265745 TAS2R39P59534 338 aa9.15□□□□□ -0.94
VPS41-201ENST00000265745 CDKL1Q00532 357 aa9.15□□□□□ -0.94
VPS41-201ENST00000265745 ACTN3Q08043 901 aaPredicted RBP9.15□□□□□ -0.94
VPS41-201ENST00000265745 RGS1Q08116 209 aa9.15□□□□□ -0.94
VPS41-201ENST00000265745 EXT1Q16394 746 aa9.15□□□□□ -0.94
VPS41-201ENST00000265745 SFT2D3Q587I9 215 aa9.15□□□□□ -0.94
VPS41-201ENST00000265745 NIPAL1Q6NVV3 410 aa9.15□□□□□ -0.94
VPS41-201ENST00000265745 NXPE4Q6UWF7 544 aa9.15□□□□□ -0.94
VPS41-201ENST00000265745 CTAGE6Q86UF2 777 aa9.15□□□□□ -0.94
VPS41-201ENST00000265745 ANKRD53Q8N9V6 530 aa9.15□□□□□ -0.94
VPS41-201ENST00000265745 FBXO36Q8NEA4 188 aa9.15□□□□□ -0.94
VPS41-201ENST00000265745 DNAJB8Q8NHS0 232 aa9.15□□□□□ -0.94
VPS41-201ENST00000265745 UTP15Q8TED0 518 aaKnown RBP9.15□□□□□ -0.94
VPS41-201ENST00000265745 ANKRD49Q8WVL7 239 aa9.15□□□□□ -0.94
VPS41-201ENST00000265745 TSLPQ969D9 159 aa9.15□□□□□ -0.94
VPS41-201ENST00000265745 TBC1D20Q96BZ9 403 aa9.15□□□□□ -0.94
VPS41-201ENST00000265745 ZNF354BQ96LW1 612 aa9.15□□□□□ -0.94
VPS41-201ENST00000265745 TSNARE1Q96NA8 513 aa9.15□□□□□ -0.94
VPS41-201ENST00000265745 KRT12Q99456 494 aa9.15□□□□□ -0.94
VPS41-201ENST00000265745 SPNS1Q9H2V7 528 aa9.15□□□□□ -0.94
VPS41-201ENST00000265745 CLK4Q9HAZ1 481 aaKnown RBP9.15□□□□□ -0.94
VPS41-201ENST00000265745 ABI3Q9P2A4 366 aa9.15□□□□□ -0.94
VPS41-201ENST00000265745 SLC22A14Q9Y267 594 aa9.15□□□□□ -0.94
VPS41-201ENST00000265745 SNX24Q9Y343 169 aa9.15□□□□□ -0.94
VPS41-201ENST00000265745 KCNE2Q9Y6J6 123 aa9.15□□□□□ -0.94
VPS41-201ENST00000265745 NBPF19A0A087WUL8 3843 aa9.14□□□□□ -0.95
VPS41-201ENST00000265745 CCDC88CQ9P219 2028 aa9.14□□□□□ -0.95
VPS41-201ENST00000265745 FAM95CA0A1B0GW59 222 aa9.14□□□□□ -0.95
VPS41-201ENST00000265745 NPEPPSL1A6NEC2 478 aa9.14□□□□□ -0.95
VPS41-201ENST00000265745 B4GALT2O60909 372 aa9.14□□□□□ -0.95
VPS41-201ENST00000265745 PIAS1O75925 651 aa9.14□□□□□ -0.95
VPS41-201ENST00000265745 RASAL1O95294 804 aa9.14□□□□□ -0.95
VPS41-201ENST00000265745 CRYABP02511 175 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms