RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 TAS2R9Q9NYW1 312 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 ING4Q9UNL4 249 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 ARSFP54793 590 aa13.5□□□□□ -0.25
CDH3-201ENST00000264012 RUNX3Q13761 415 aa13.5□□□□□ -0.25
CDH3-201ENST00000264012 BLOC1S3Q6QNY0 202 aa13.5□□□□□ -0.25
CDH3-201ENST00000264012 GKN2Q86XP6 184 aa13.5□□□□□ -0.25
CDH3-201ENST00000264012 PHF12Q96QT6 1004 aa13.5□□□□□ -0.25
CDH3-201ENST00000264012 KCNS3Q9BQ31 491 aa13.5□□□□□ -0.25
CDH3-201ENST00000264012 SMURF2Q9HAU4 748 aa13.5□□□□□ -0.25
CDH3-201ENST00000264012 IGSF5Q9NSI5 407 aa13.5□□□□□ -0.25
CDH3-201ENST00000264012 HCN3Q9P1Z3 774 aa13.5□□□□□ -0.25
CDH3-201ENST00000264012 MED31Q9Y3C7 131 aa13.5□□□□□ -0.25
CDH3-201ENST00000264012 USP3Q9Y6I4 520 aa13.5□□□□□ -0.25
CDH3-201ENST00000264012 BTAF1O14981 1849 aa13.5□□□□□ -0.25
CDH3-201ENST00000264012 HTRA2O43464 458 aaPredicted RBP13.5□□□□□ -0.25
CDH3-201ENST00000264012 ZNF823P16415 610 aa13.5□□□□□ -0.25
CDH3-201ENST00000264012 PKDCCQ504Y2 493 aa13.5□□□□□ -0.25
CDH3-201ENST00000264012 USP43Q70EL4 1123 aa13.5□□□□□ -0.25
CDH3-201ENST00000264012 TMEM126BQ8IUX1 230 aa13.5□□□□□ -0.25
CDH3-201ENST00000264012 NCSTNQ92542 709 aa13.5□□□□□ -0.25
CDH3-201ENST00000264012 L3HYPDHQ96EM0 354 aa13.5□□□□□ -0.25
CDH3-201ENST00000264012 WDR92Q96MX6 357 aa13.5□□□□□ -0.25
CDH3-201ENST00000264012 BCL2L14Q9BZR8 327 aa13.5□□□□□ -0.25
CDH3-201ENST00000264012 IL17CQ9P0M4 197 aa13.5□□□□□ -0.25
CDH3-201ENST00000264012 RLN1P04808 185 aa13.5□□□□□ -0.25
CDH3-201ENST00000264012 ASGR2P07307 311 aa13.5□□□□□ -0.25
CDH3-201ENST00000264012 CST5P28325 142 aaPredicted RBP13.5□□□□□ -0.25
CDH3-201ENST00000264012 ETV4P43268 484 aa13.5□□□□□ -0.25
CDH3-201ENST00000264012 DNASE1L1P49184 302 aa13.5□□□□□ -0.25
CDH3-201ENST00000264012 SMSP52788 366 aa13.5□□□□□ -0.25
CDH3-201ENST00000264012 DEFB119Q8N690 84 aa13.5□□□□□ -0.25
CDH3-201ENST00000264012 ZNF689Q96CS4 500 aaPredicted RBP13.5□□□□□ -0.25
CDH3-201ENST00000264012 GINS4Q9BRT9 223 aa13.5□□□□□ -0.25
CDH3-201ENST00000264012 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.5□□□□□ -0.25
CDH3-201ENST00000264012 LINC00597Q9H2U6 94 aa13.5□□□□□ -0.25
CDH3-201ENST00000264012 ING3Q9NXR8 418 aa13.5□□□□□ -0.25
CDH3-201ENST00000264012 PCTPQ9UKL6 214 aa13.5□□□□□ -0.25
CDH3-201ENST00000264012 WDR45Q9Y484 360 aa13.5□□□□□ -0.25
CDH3-201ENST00000264012 NWD2Q9ULI1 1742 aa13.5□□□□□ -0.25
CDH3-201ENST00000264012 WASH4PA8MWX3 477 aa13.5□□□□□ -0.25
CDH3-201ENST00000264012 BTN3A3O00478 584 aa13.5□□□□□ -0.25
CDH3-201ENST00000264012 IL3P08700 152 aa13.5□□□□□ -0.25
CDH3-201ENST00000264012 DHRS4L1P0CG22 281 aa13.5□□□□□ -0.25
CDH3-201ENST00000264012 CDKN1CP49918 316 aaPredicted RBP13.5□□□□□ -0.25
CDH3-201ENST00000264012 ID2Q02363 134 aa13.5□□□□□ -0.25
CDH3-201ENST00000264012 TRNP1Q6NT89 227 aa13.5□□□□□ -0.25
CDH3-201ENST00000264012 AKAP14Q86UN6 197 aa13.5□□□□□ -0.25
CDH3-201ENST00000264012 HPS1Q92902 700 aa13.5□□□□□ -0.25
CDH3-201ENST00000264012 SLC25A36Q96CQ1 311 aa13.5□□□□□ -0.25
CDH3-201ENST00000264012 DIABLOQ9NR28 239 aa13.5□□□□□ -0.25
CDH3-201ENST00000264012 TAS2R7Q9NYW3 318 aa13.5□□□□□ -0.25
CDH3-201ENST00000264012 PCDHGA2Q9Y5H1 932 aa13.5□□□□□ -0.25
CDH3-201ENST00000264012 CACNA1SQ13698 1873 aa13.49□□□□□ -0.25
CDH3-201ENST00000264012 CITO14578 2027 aa13.49□□□□□ -0.25
CDH3-201ENST00000264012 A8MU76 341 aa13.49□□□□□ -0.25
CDH3-201ENST00000264012 SLC22A1O15245 554 aa13.49□□□□□ -0.25
CDH3-201ENST00000264012 RNGTTO60942 597 aaKnown RBP13.49□□□□□ -0.25
CDH3-201ENST00000264012 HTR1EP28566 365 aa13.49□□□□□ -0.25
CDH3-201ENST00000264012 MVKQ03426 396 aa13.49□□□□□ -0.25
CDH3-201ENST00000264012 NEK7Q8TDX7 302 aa13.49□□□□□ -0.25
CDH3-201ENST00000264012 KLHL6Q8WZ60 621 aa13.49□□□□□ -0.25
CDH3-201ENST00000264012 COMMD4Q9H0A8 199 aa13.49□□□□□ -0.25
CDH3-201ENST00000264012 IL26Q9NPH9 171 aa13.49□□□□□ -0.25
CDH3-201ENST00000264012 CFL2Q9Y281 166 aa13.49□□□□□ -0.25
CDH3-201ENST00000264012 PCDHGB7Q9Y5F8 929 aa13.49□□□□□ -0.25
CDH3-201ENST00000264012 DRGXA6NNA5 263 aa13.49□□□□□ -0.25
CDH3-201ENST00000264012 TLX3O43711 291 aaPredicted RBP13.49□□□□□ -0.25
CDH3-201ENST00000264012 EEDO75530 441 aaKnown RBP13.49□□□□□ -0.25
CDH3-201ENST00000264012 UQCRC2P22695 453 aa13.49□□□□□ -0.25
CDH3-201ENST00000264012 CXCR1P25024 350 aa13.49□□□□□ -0.25
CDH3-201ENST00000264012 HTRA3P83110 453 aa13.49□□□□□ -0.25
CDH3-201ENST00000264012 KCNC4Q03721 635 aa13.49□□□□□ -0.25
CDH3-201ENST00000264012 ALKBH2Q6NS38 261 aa13.49□□□□□ -0.25
CDH3-201ENST00000264012 ALKAL1Q6UXT8 129 aa13.49□□□□□ -0.25
CDH3-201ENST00000264012 PAQR9Q6ZVX9 377 aa13.49□□□□□ -0.25
CDH3-201ENST00000264012 TAS1R1Q7RTX1 841 aa13.49□□□□□ -0.25
CDH3-201ENST00000264012 RAB43Q86YS6 212 aa13.49□□□□□ -0.25
CDH3-201ENST00000264012 KDM1BQ8NB78 822 aa13.49□□□□□ -0.25
CDH3-201ENST00000264012 SLC45A3Q96JT2 553 aa13.49□□□□□ -0.25
CDH3-201ENST00000264012 LYARQ9NX58 379 aaKnown RBP13.49□□□□□ -0.25
CDH3-201ENST00000264012 HCN4Q9Y3Q4 1203 aa13.49□□□□□ -0.25
CDH3-201ENST00000264012 RCBTB2O95199 551 aa13.49□□□□□ -0.25
CDH3-201ENST00000264012 CLIC3O95833 236 aa13.49□□□□□ -0.25
CDH3-201ENST00000264012 RENP00797 406 aa13.49□□□□□ -0.25
CDH3-201ENST00000264012 CD9P21926 228 aa13.49□□□□□ -0.25
CDH3-201ENST00000264012 SUOXP51687 545 aa13.49□□□□□ -0.25
CDH3-201ENST00000264012 MEP1AQ16819 746 aa13.49□□□□□ -0.25
CDH3-201ENST00000264012 VMACQ2NL98 169 aa13.49□□□□□ -0.25
CDH3-201ENST00000264012 KANK2Q63ZY3 851 aa13.49□□□□□ -0.25
CDH3-201ENST00000264012 KLHL36Q8N4N3 616 aa13.49□□□□□ -0.25
CDH3-201ENST00000264012 MINDY1Q8N5J2 469 aa13.49□□□□□ -0.25
CDH3-201ENST00000264012 TRNAU1APQ9NX07 287 aaKnown RBP13.49□□□□□ -0.25
CDH3-201ENST00000264012 RHCGQ9UBD6 479 aa13.49□□□□□ -0.25
CDH3-201ENST00000264012 SDK1Q7Z5N4 2213 aa13.49□□□□□ -0.25
CDH3-201ENST00000264012 ZNF860A6NHJ4 632 aa13.49□□□□□ -0.25
CDH3-201ENST00000264012 SOX14O95416 240 aa13.49□□□□□ -0.25
CDH3-201ENST00000264012 SLC6A4P31645 630 aa13.49□□□□□ -0.25
CDH3-201ENST00000264012 OR1E2P47887 323 aa13.49□□□□□ -0.25
CDH3-201ENST00000264012 GALNT1Q10472 559 aaPredicted RBP13.49□□□□□ -0.25
CDH3-201ENST00000264012 CMPK2Q5EBM0 449 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms