RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 BCL7CQ8WUZ0 217 aaPredicted RBP16.79■□□□□ 0.28
TRAM1-201ENST00000262213 TRNT1Q96Q11 434 aaKnown RBP16.79■□□□□ 0.28
TRAM1-201ENST00000262213 FAM129BQ96TA1 746 aa16.79■□□□□ 0.28
TRAM1-201ENST00000262213 FKBP14Q9NWM8 211 aa16.79■□□□□ 0.28
TRAM1-201ENST00000262213 TBC1D24Q9ULP9 559 aa16.79■□□□□ 0.28
TRAM1-201ENST00000262213 POFUT2Q9Y2G5 429 aa16.79■□□□□ 0.28
TRAM1-201ENST00000262213 PADI2Q9Y2J8 665 aa16.79■□□□□ 0.28
TRAM1-201ENST00000262213 A3GALT2U3KPV4 340 aa16.79■□□□□ 0.28
TRAM1-201ENST00000262213 MGAT4DA6NG13 374 aa16.78■□□□□ 0.28
TRAM1-201ENST00000262213 GPX5O75715 221 aa16.78■□□□□ 0.28
TRAM1-201ENST00000262213 OR56A5P0C7T3 313 aa16.78■□□□□ 0.28
TRAM1-201ENST00000262213 PRPH2P23942 346 aa16.78■□□□□ 0.28
TRAM1-201ENST00000262213 PFN3P60673 137 aa16.78■□□□□ 0.28
TRAM1-201ENST00000262213 KRR1Q13601 381 aaKnown RBP16.78■□□□□ 0.28
TRAM1-201ENST00000262213 DOC2AQ14183 400 aa16.78■□□□□ 0.28
TRAM1-201ENST00000262213 MICAQ29983 383 aa16.78■□□□□ 0.28
TRAM1-201ENST00000262213 GPR155Q7Z3F1 870 aa16.78■□□□□ 0.28
TRAM1-201ENST00000262213 CCDC190Q86UF4 302 aa16.78■□□□□ 0.28
TRAM1-201ENST00000262213 DEPDC4Q8N2C3 294 aa16.78■□□□□ 0.28
TRAM1-201ENST00000262213 OR6F1Q8NGZ6 308 aa16.78■□□□□ 0.28
TRAM1-201ENST00000262213 TTYH2Q9BSA4 534 aa16.78■□□□□ 0.28
TRAM1-201ENST00000262213 C11orf16Q9NQ32 467 aa16.78■□□□□ 0.28
TRAM1-201ENST00000262213 CLEC4EQ9ULY5 219 aa16.78■□□□□ 0.28
TRAM1-201ENST00000262213 MAP4K5Q9Y4K4 846 aa16.78■□□□□ 0.28
TRAM1-201ENST00000262213 CHRM5P08912 532 aaPredicted RBP16.78■□□□□ 0.28
TRAM1-201ENST00000262213 CBSLP0DN79 551 aa16.78■□□□□ 0.28
TRAM1-201ENST00000262213 PTPN2P17706 415 aa16.78■□□□□ 0.28
TRAM1-201ENST00000262213 CBSP35520 551 aa16.78■□□□□ 0.28
TRAM1-201ENST00000262213 FEN1P39748 380 aaKnown RBP16.78■□□□□ 0.28
TRAM1-201ENST00000262213 MXD1Q05195 221 aa16.78■□□□□ 0.28
TRAM1-201ENST00000262213 PTGES3Q15185 160 aaKnown RBP16.78■□□□□ 0.28
TRAM1-201ENST00000262213 TRIM60Q495X7 471 aa16.78■□□□□ 0.28
TRAM1-201ENST00000262213 IFI44LQ53G44 452 aa16.78■□□□□ 0.28
TRAM1-201ENST00000262213 ARMC4Q5T2S8 1044 aa16.78■□□□□ 0.28
TRAM1-201ENST00000262213 C17orf99Q6UX52 265 aa16.78■□□□□ 0.28
TRAM1-201ENST00000262213 PTCHD4Q6ZW05 846 aa16.78■□□□□ 0.28
TRAM1-201ENST00000262213 GPR151Q8TDV0 419 aa16.78■□□□□ 0.28
TRAM1-201ENST00000262213 KLF16Q9BXK1 252 aaPredicted RBP16.78■□□□□ 0.28
TRAM1-201ENST00000262213 SGK2Q9HBY8 427 aa16.78■□□□□ 0.28
TRAM1-201ENST00000262213 TRIM39Q9HCM9 518 aa16.78■□□□□ 0.28
TRAM1-201ENST00000262213 TIGARQ9NQ88 270 aa16.78■□□□□ 0.28
TRAM1-201ENST00000262213 SNTG1Q9NSN8 517 aa16.78■□□□□ 0.28
TRAM1-201ENST00000262213 MUTYHQ9UIF7 546 aa16.78■□□□□ 0.28
TRAM1-201ENST00000262213 RUVBL1Q9Y265 456 aaKnown RBP16.78■□□□□ 0.28
TRAM1-201ENST00000262213 OR51B4Q9Y5P0 310 aa16.78■□□□□ 0.28
TRAM1-201ENST00000262213 E9PQ18 207 aa16.77■□□□□ 0.28
TRAM1-201ENST00000262213 SAP18O00422 153 aaKnown RBP16.77■□□□□ 0.28
TRAM1-201ENST00000262213 ANXA8P13928 327 aa16.77■□□□□ 0.28
TRAM1-201ENST00000262213 HMGA1P17096 107 aaKnown RBP16.77■□□□□ 0.28
TRAM1-201ENST00000262213 GABRB1P18505 474 aa16.77■□□□□ 0.28
TRAM1-201ENST00000262213 CYP2A7P20853 494 aa16.77■□□□□ 0.28
TRAM1-201ENST00000262213 HTR3AP46098 478 aa16.77■□□□□ 0.28
TRAM1-201ENST00000262213 PRIM2P49643 509 aa16.77■□□□□ 0.28
TRAM1-201ENST00000262213 STK19P49842 368 aaPredicted RBP16.77■□□□□ 0.28
TRAM1-201ENST00000262213 ZFP69Q49AA0 526 aa16.77■□□□□ 0.28
TRAM1-201ENST00000262213 ZNF544Q6NX49 715 aa16.77■□□□□ 0.28
TRAM1-201ENST00000262213 FAM180BQ6P0A1 224 aa16.77■□□□□ 0.28
TRAM1-201ENST00000262213 LMNTD1Q8N9Z9 388 aa16.77■□□□□ 0.28
TRAM1-201ENST00000262213 VPS37AQ8NEZ2 397 aa16.77■□□□□ 0.28
TRAM1-201ENST00000262213 LILRB4Q8NHJ6 448 aa16.77■□□□□ 0.28
TRAM1-201ENST00000262213 VPS35Q96QK1 796 aa16.77■□□□□ 0.28
TRAM1-201ENST00000262213 CHST8Q9H2A9 424 aa16.77■□□□□ 0.28
TRAM1-201ENST00000262213 WWP2O00308 870 aa16.77■□□□□ 0.28
TRAM1-201ENST00000262213 RPLP2P05387 115 aaKnown RBP16.77■□□□□ 0.28
TRAM1-201ENST00000262213 C8GP07360 202 aa16.77■□□□□ 0.28
TRAM1-201ENST00000262213 PCGF2P35227 344 aa16.77■□□□□ 0.28
TRAM1-201ENST00000262213 OLR1P78380 273 aa16.77■□□□□ 0.28
TRAM1-201ENST00000262213 NAE1Q13564 534 aa16.77■□□□□ 0.28
TRAM1-201ENST00000262213 SSX1Q16384 188 aa16.77■□□□□ 0.28
TRAM1-201ENST00000262213 UBE2J2Q8N2K1 259 aa16.77■□□□□ 0.28
TRAM1-201ENST00000262213 PIK3R3Q92569 461 aa16.77■□□□□ 0.28
TRAM1-201ENST00000262213 TP53INP1Q96A56 240 aa16.77■□□□□ 0.28
TRAM1-201ENST00000262213 ASPNQ9BXN1 380 aa16.77■□□□□ 0.28
TRAM1-201ENST00000262213 BEX2Q9BXY8 128 aa16.77■□□□□ 0.28
TRAM1-201ENST00000262213 SMURF1Q9HCE7 757 aa16.77■□□□□ 0.28
TRAM1-201ENST00000262213 PLSCR3Q9NRY6 295 aa16.77■□□□□ 0.28
TRAM1-201ENST00000262213 TAS2R9Q9NYW1 312 aa16.77■□□□□ 0.28
TRAM1-201ENST00000262213 TBC1D14Q9P2M4 693 aa16.77■□□□□ 0.28
TRAM1-201ENST00000262213 CFL2Q9Y281 166 aa16.77■□□□□ 0.28
TRAM1-201ENST00000262213 TMEM98Q9Y2Y6 226 aa16.77■□□□□ 0.28
TRAM1-201ENST00000262213 C1orf226A1L170 272 aa16.77■□□□□ 0.27
TRAM1-201ENST00000262213 EFCAB10A6NFE3 127 aa16.77■□□□□ 0.27
TRAM1-201ENST00000262213 OR2AG2A6NM03 316 aa16.77■□□□□ 0.27
TRAM1-201ENST00000262213 HOXC11O43248 304 aaPredicted RBP16.77■□□□□ 0.27
TRAM1-201ENST00000262213 CNR2P34972 360 aa16.77■□□□□ 0.27
TRAM1-201ENST00000262213 RPS19P39019 145 aaKnown RBP16.77■□□□□ 0.27
TRAM1-201ENST00000262213 CCL23P55773 120 aa16.77■□□□□ 0.27
TRAM1-201ENST00000262213 LEXMQ3ZCV2 418 aa16.77■□□□□ 0.27
TRAM1-201ENST00000262213 ZNF385BQ569K4 471 aa16.77■□□□□ 0.27
TRAM1-201ENST00000262213 DGKKQ5KSL6 1271 aa16.77■□□□□ 0.27
TRAM1-201ENST00000262213 RETSATQ6NUM9 610 aa16.77■□□□□ 0.27
TRAM1-201ENST00000262213 THOC6Q86W42 341 aaKnown RBP16.77■□□□□ 0.27
TRAM1-201ENST00000262213 UBQLNLQ8IYU4 475 aa16.77■□□□□ 0.27
TRAM1-201ENST00000262213 AQP11Q8NBQ7 271 aa16.77■□□□□ 0.27
TRAM1-201ENST00000262213 MMP28Q9H239 520 aa16.77■□□□□ 0.27
TRAM1-201ENST00000262213 RETREG1Q9H6L5 497 aa16.77■□□□□ 0.27
TRAM1-201ENST00000262213 PCDHB7Q9Y5E2 793 aa16.77■□□□□ 0.27
TRAM1-201ENST00000262213 SMIM30A4D0T7 59 aa16.76■□□□□ 0.27
TRAM1-201ENST00000262213 H7C4K7 107 aa16.76■□□□□ 0.27
TRAM1-201ENST00000262213 CCRL2O00421 344 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms