RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 TMEM173Q86WV6 379 aaPredicted RBP4.4□□□□□ -1.71
TRA2B-201ENST00000259043 SNX32Q86XE0 403 aa4.4□□□□□ -1.71
TRA2B-201ENST00000259043 STPG4Q8N801 248 aa4.4□□□□□ -1.71
TRA2B-201ENST00000259043 TMEM190Q8WZ59 177 aa4.4□□□□□ -1.71
TRA2B-201ENST00000259043 FRAT1Q92837 279 aaPredicted RBP4.4□□□□□ -1.71
TRA2B-201ENST00000259043 STAMBPL1Q96FJ0 436 aa4.4□□□□□ -1.71
TRA2B-201ENST00000259043 SLX1AQ9BQ83 275 aa4.4□□□□□ -1.71
TRA2B-201ENST00000259043 MTG1Q9BT17 334 aaPredicted RBP4.4□□□□□ -1.71
TRA2B-201ENST00000259043 C2orf40Q9H1Z8 148 aa4.4□□□□□ -1.71
TRA2B-201ENST00000259043 ST6GALNAC4Q9H4F1 302 aa4.4□□□□□ -1.71
TRA2B-201ENST00000259043 CNOT10Q9H9A5 744 aaKnown RBP4.4□□□□□ -1.71
TRA2B-201ENST00000259043 COPS7BQ9H9Q2 264 aaPredicted RBP4.4□□□□□ -1.71
TRA2B-201ENST00000259043 TRPC7Q9HCX4 862 aa4.4□□□□□ -1.71
TRA2B-201ENST00000259043 CYP39A1Q9NYL5 469 aa4.4□□□□□ -1.71
TRA2B-201ENST00000259043 GAGE2DQ9UEU5 116 aa4.4□□□□□ -1.71
TRA2B-201ENST00000259043 CTNNA3Q9UI47 895 aa4.4□□□□□ -1.71
TRA2B-201ENST00000259043 POMT1Q9Y6A1 747 aa4.4□□□□□ -1.71
TRA2B-201ENST00000259043 ZNF532Q9HCE3 1301 aa4.4□□□□□ -1.71
TRA2B-201ENST00000259043 OTOGLQ3ZCN5 2332 aa4.39□□□□□ -1.71
TRA2B-201ENST00000259043 ASB14A6NK59 587 aa4.39□□□□□ -1.71
TRA2B-201ENST00000259043 BUD23O43709 281 aaKnown RBP4.39□□□□□ -1.71
TRA2B-201ENST00000259043 SSX4O60224 188 aa4.39□□□□□ -1.71
TRA2B-201ENST00000259043 PENKP01210 267 aaPredicted RBP4.39□□□□□ -1.71
TRA2B-201ENST00000259043 HRH2P25021 359 aa4.39□□□□□ -1.71
TRA2B-201ENST00000259043 TCF7P36402 384 aaPredicted RBP4.39□□□□□ -1.71
TRA2B-201ENST00000259043 NR2C2P49116 596 aa4.39□□□□□ -1.71
TRA2B-201ENST00000259043 NPY4RP50391 375 aa4.39□□□□□ -1.71
TRA2B-201ENST00000259043 CAPZA1P52907 286 aa4.39□□□□□ -1.71
TRA2B-201ENST00000259043 CTSCP53634 463 aa4.39□□□□□ -1.71
TRA2B-201ENST00000259043 SNAP25P60880 206 aa4.39□□□□□ -1.71
TRA2B-201ENST00000259043 ERVK11-1P61568 191 aa4.39□□□□□ -1.71
TRA2B-201ENST00000259043 SIGLEC14Q08ET2 396 aa4.39□□□□□ -1.71
TRA2B-201ENST00000259043 GPM6BQ13491 265 aa4.39□□□□□ -1.71
TRA2B-201ENST00000259043 ZNF273Q14593 569 aa4.39□□□□□ -1.71
TRA2B-201ENST00000259043 FAM53AQ6NSI3 398 aaPredicted RBP4.39□□□□□ -1.71
TRA2B-201ENST00000259043 CTR9Q6PD62 1173 aa4.39□□□□□ -1.71
TRA2B-201ENST00000259043 DET1Q7L5Y6 550 aa4.39□□□□□ -1.71
TRA2B-201ENST00000259043 GLRX5Q86SX6 157 aa4.39□□□□□ -1.71
TRA2B-201ENST00000259043 MSANTD4Q8NCY6 345 aa4.39□□□□□ -1.71
TRA2B-201ENST00000259043 PAPD5Q8NDF8 572 aaKnown RBP4.39□□□□□ -1.71
TRA2B-201ENST00000259043 CTCFLQ8NI51 663 aaPredicted RBP4.39□□□□□ -1.71
TRA2B-201ENST00000259043 PPP4R1Q8TF05 950 aa4.39□□□□□ -1.71
TRA2B-201ENST00000259043 SENP5Q96HI0 755 aaPredicted RBP4.39□□□□□ -1.71
TRA2B-201ENST00000259043 OXNAD1Q96HP4 312 aaPredicted RBP4.39□□□□□ -1.71
TRA2B-201ENST00000259043 LINC00615Q96LM1 132 aaPredicted RBP4.39□□□□□ -1.71
TRA2B-201ENST00000259043 CCDC114Q96M63 670 aa4.39□□□□□ -1.71
TRA2B-201ENST00000259043 FNBP1Q96RU3 617 aa4.39□□□□□ -1.71
TRA2B-201ENST00000259043 SEPHS2Q99611 448 aa4.39□□□□□ -1.71
TRA2B-201ENST00000259043 MGME1Q9BQP7 344 aa4.39□□□□□ -1.71
TRA2B-201ENST00000259043 BARHL1Q9BZE3 327 aa4.39□□□□□ -1.71
TRA2B-201ENST00000259043 CRNKL1Q9BZJ0 848 aaKnown RBP4.39□□□□□ -1.71
TRA2B-201ENST00000259043 NYAP2Q9P242 653 aa4.39□□□□□ -1.71
TRA2B-201ENST00000259043 LIPGQ9Y5X9 500 aa4.39□□□□□ -1.71
TRA2B-201ENST00000259043 FANCMQ8IYD8 2048 aa4.39□□□□□ -1.71
TRA2B-201ENST00000259043 FASNP49327 2511 aaKnown RBP4.39□□□□□ -1.71
TRA2B-201ENST00000259043 ZFYVE26Q68DK2 2539 aa4.39□□□□□ -1.71
TRA2B-201ENST00000259043 PLXNA4Q9HCM2 1894 aa4.39□□□□□ -1.71
TRA2B-201ENST00000259043 GCN1Q92616 2671 aaKnown RBP4.38□□□□□ -1.71
TRA2B-201ENST00000259043 ANXA2P2A6NMY6 339 aa4.38□□□□□ -1.71
TRA2B-201ENST00000259043 ERI2A8K979 691 aaKnown RBP4.38□□□□□ -1.71
TRA2B-201ENST00000259043 C5orf67F2Z3F1 127 aa4.38□□□□□ -1.71
TRA2B-201ENST00000259043 J3QR06 171 aa4.38□□□□□ -1.71
TRA2B-201ENST00000259043 SLC7A4O43246 635 aa4.38□□□□□ -1.71
TRA2B-201ENST00000259043 CIDEAO60543 219 aa4.38□□□□□ -1.71
TRA2B-201ENST00000259043 ZNF217O75362 1048 aa4.38□□□□□ -1.71
TRA2B-201ENST00000259043 CREG1O75629 220 aa4.38□□□□□ -1.71
TRA2B-201ENST00000259043 SLCO2B1O94956 709 aa4.38□□□□□ -1.71
TRA2B-201ENST00000259043 TFAP2AP05549 437 aa4.38□□□□□ -1.71
TRA2B-201ENST00000259043 ZNF883P0CG24 379 aa4.38□□□□□ -1.71
TRA2B-201ENST00000259043 PRSS56P0CW18 603 aa4.38□□□□□ -1.71
TRA2B-201ENST00000259043 DNASE1P24855 282 aa4.38□□□□□ -1.71
TRA2B-201ENST00000259043 DNAJB1P25685 340 aa4.38□□□□□ -1.71
TRA2B-201ENST00000259043 TLX1P31314 330 aaPredicted RBP4.38□□□□□ -1.71
TRA2B-201ENST00000259043 MTHFRP42898 656 aa4.38□□□□□ -1.71
TRA2B-201ENST00000259043 CDK3Q00526 305 aa4.38□□□□□ -1.71
TRA2B-201ENST00000259043 RBPJQ06330 500 aa4.38□□□□□ -1.71
TRA2B-201ENST00000259043 MELKQ14680 651 aa4.38□□□□□ -1.71
TRA2B-201ENST00000259043 CDC37Q16543 378 aaPredicted RBP4.38□□□□□ -1.71
TRA2B-201ENST00000259043 PTGISQ16647 500 aa4.38□□□□□ -1.71
TRA2B-201ENST00000259043 TEX38Q6PEX7 206 aa4.38□□□□□ -1.71
TRA2B-201ENST00000259043 SUSD1Q6UWL2 747 aa4.38□□□□□ -1.71
TRA2B-201ENST00000259043 RBMS3Q6XE24 437 aaKnown RBP4.38□□□□□ -1.71
TRA2B-201ENST00000259043 ADGRD2Q7Z7M1 963 aa4.38□□□□□ -1.71
TRA2B-201ENST00000259043 GBGT1Q8N5D6 347 aa4.38□□□□□ -1.71
TRA2B-201ENST00000259043 SLC5A8Q8N695 610 aa4.38□□□□□ -1.71
TRA2B-201ENST00000259043 TMEM105Q8N8V8 129 aa4.38□□□□□ -1.71
TRA2B-201ENST00000259043 DBF4BQ8NFT6 615 aa4.38□□□□□ -1.71
TRA2B-201ENST00000259043 WDR20Q8TBZ3 569 aa4.38□□□□□ -1.71
TRA2B-201ENST00000259043 SLAMF9Q96A28 289 aa4.38□□□□□ -1.71
TRA2B-201ENST00000259043 NXNL1Q96CM4 212 aa4.38□□□□□ -1.71
TRA2B-201ENST00000259043 RMDN2Q96LZ7 410 aa4.38□□□□□ -1.71
TRA2B-201ENST00000259043 API5Q9BZZ5 524 aaKnown RBP4.38□□□□□ -1.71
TRA2B-201ENST00000259043 DNAI2Q9GZS0 605 aa4.38□□□□□ -1.71
TRA2B-201ENST00000259043 WNT5BQ9H1J7 359 aa4.38□□□□□ -1.71
TRA2B-201ENST00000259043 SLC52A3Q9NQ40 469 aa4.38□□□□□ -1.71
TRA2B-201ENST00000259043 EQTNQ9NQ60 294 aa4.38□□□□□ -1.71
TRA2B-201ENST00000259043 DPP3Q9NY33 737 aa4.38□□□□□ -1.71
TRA2B-201ENST00000259043 RCC2Q9P258 522 aaKnown RBP4.38□□□□□ -1.71
TRA2B-201ENST00000259043 B3GALT5Q9Y2C3 310 aa4.38□□□□□ -1.71
TRA2B-201ENST00000259043 NME7Q9Y5B8 376 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms