RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 MAGEA13PA6NCF6 341 aa12.94□□□□□ -0.34
PRPF38A-201ENST00000257181 PDCD5O14737 125 aa12.94□□□□□ -0.34
PRPF38A-201ENST00000257181 RFPL3O75679 317 aa12.94□□□□□ -0.34
PRPF38A-201ENST00000257181 TEAD1P28347 426 aa12.94□□□□□ -0.34
PRPF38A-201ENST00000257181 AHRP35869 848 aa12.94□□□□□ -0.34
PRPF38A-201ENST00000257181 DIO3P55073 304 aa12.94□□□□□ -0.34
PRPF38A-201ENST00000257181 KLC1Q07866 573 aa12.94□□□□□ -0.34
PRPF38A-201ENST00000257181 ABHD18Q0P651 414 aa12.94□□□□□ -0.34
PRPF38A-201ENST00000257181 HYAL1Q12794 435 aa12.94□□□□□ -0.34
PRPF38A-201ENST00000257181 ZNF267Q14586 743 aaPredicted RBP12.94□□□□□ -0.34
PRPF38A-201ENST00000257181 MOGQ16653 247 aa12.94□□□□□ -0.34
PRPF38A-201ENST00000257181 ZNF423Q2M1K9 1284 aa12.94□□□□□ -0.34
PRPF38A-201ENST00000257181 ANKFN1Q8N957 763 aa12.94□□□□□ -0.34
PRPF38A-201ENST00000257181 SMPDL3BQ92485 455 aa12.94□□□□□ -0.34
PRPF38A-201ENST00000257181 ATP13A2Q9NQ11 1180 aa12.94□□□□□ -0.34
PRPF38A-201ENST00000257181 C1GALT1Q9NS00 363 aa12.94□□□□□ -0.34
PRPF38A-201ENST00000257181 CLOCKO15516 846 aa12.93□□□□□ -0.34
PRPF38A-201ENST00000257181 SCGB2A1O75556 95 aa12.93□□□□□ -0.34
PRPF38A-201ENST00000257181 ZFAND5O76080 213 aa12.93□□□□□ -0.34
PRPF38A-201ENST00000257181 ACPPP15309 386 aa12.93□□□□□ -0.34
PRPF38A-201ENST00000257181 SOX11P35716 441 aa12.93□□□□□ -0.34
PRPF38A-201ENST00000257181 IL10RAQ13651 578 aa12.93□□□□□ -0.34
PRPF38A-201ENST00000257181 SCARB2Q14108 478 aa12.93□□□□□ -0.34
PRPF38A-201ENST00000257181 LPAL2Q16609 132 aa12.93□□□□□ -0.34
PRPF38A-201ENST00000257181 TIGD2Q4W5G0 525 aa12.93□□□□□ -0.34
PRPF38A-201ENST00000257181 TMPPEQ6ZT21 453 aa12.93□□□□□ -0.34
PRPF38A-201ENST00000257181 TTLL10Q6ZVT0 673 aa12.93□□□□□ -0.34
PRPF38A-201ENST00000257181 NANOGNBQ7Z5D8 188 aa12.93□□□□□ -0.34
PRPF38A-201ENST00000257181 CARFQ8N187 725 aa12.93□□□□□ -0.34
PRPF38A-201ENST00000257181 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.93□□□□□ -0.34
PRPF38A-201ENST00000257181 OR56A3Q8NH54 315 aa12.93□□□□□ -0.34
PRPF38A-201ENST00000257181 NEK7Q8TDX7 302 aa12.93□□□□□ -0.34
PRPF38A-201ENST00000257181 RBM4BQ9BQ04 359 aaKnown RBP12.93□□□□□ -0.34
PRPF38A-201ENST00000257181 RBM4Q9BWF3 364 aaKnown RBP12.93□□□□□ -0.34
PRPF38A-201ENST00000257181 HMG20AQ9NP66 347 aa12.93□□□□□ -0.34
PRPF38A-201ENST00000257181 CRNNQ9UBG3 495 aaPredicted RBP12.93□□□□□ -0.34
PRPF38A-201ENST00000257181 PTRH2Q9Y3E5 179 aaKnown RBP12.93□□□□□ -0.34
PRPF38A-201ENST00000257181 CCDC187A0A096LP49 1063 aa12.93□□□□□ -0.34
PRPF38A-201ENST00000257181 NSG1A0A0A6YYJ2 146 aa12.93□□□□□ -0.34
PRPF38A-201ENST00000257181 C2CD4DB7Z1M9 353 aa12.93□□□□□ -0.34
PRPF38A-201ENST00000257181 KLK1P06870 262 aa12.93□□□□□ -0.34
PRPF38A-201ENST00000257181 BPIP17213 487 aa12.93□□□□□ -0.34
PRPF38A-201ENST00000257181 MRPS35P82673 323 aaKnown RBP12.93□□□□□ -0.34
PRPF38A-201ENST00000257181 C1orf52Q8N6N3 182 aaKnown RBP12.93□□□□□ -0.34
PRPF38A-201ENST00000257181 OR52E4Q8NGH9 312 aa12.93□□□□□ -0.34
PRPF38A-201ENST00000257181 OR2L8Q8NGY9 312 aa12.93□□□□□ -0.34
PRPF38A-201ENST00000257181 ZNF304Q9HCX3 659 aa12.93□□□□□ -0.34
PRPF38A-201ENST00000257181 A0A0U1RQJ8 604 aa12.93□□□□□ -0.34
PRPF38A-201ENST00000257181 A8MUA0 341 aa12.93□□□□□ -0.34
PRPF38A-201ENST00000257181 TRIM24O15164 1050 aa12.93□□□□□ -0.34
PRPF38A-201ENST00000257181 DNASE1L1P49184 302 aa12.93□□□□□ -0.34
PRPF38A-201ENST00000257181 HSD11B2P80365 405 aa12.93□□□□□ -0.34
PRPF38A-201ENST00000257181 UBE2J2Q8N2K1 259 aa12.93□□□□□ -0.34
PRPF38A-201ENST00000257181 ADAMTS19Q8TE59 1207 aa12.93□□□□□ -0.34
PRPF38A-201ENST00000257181 GAB3Q8WWW8 586 aa12.93□□□□□ -0.34
PRPF38A-201ENST00000257181 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.93□□□□□ -0.34
PRPF38A-201ENST00000257181 VSTM2BA6NLU5 285 aa12.93□□□□□ -0.34
PRPF38A-201ENST00000257181 LINGO3P0C6S8 592 aa12.93□□□□□ -0.34
PRPF38A-201ENST00000257181 ANXA8P13928 327 aa12.93□□□□□ -0.34
PRPF38A-201ENST00000257181 DRD4P21917 467 aa12.93□□□□□ -0.34
PRPF38A-201ENST00000257181 PRLHRP49683 370 aa12.93□□□□□ -0.34
PRPF38A-201ENST00000257181 CLCN2P51788 898 aa12.93□□□□□ -0.34
PRPF38A-201ENST00000257181 CSNK2A1P68400 391 aaPredicted RBP12.93□□□□□ -0.34
PRPF38A-201ENST00000257181 DCDP81605 110 aaKnown RBP12.93□□□□□ -0.34
PRPF38A-201ENST00000257181 GRIK2Q13002 908 aa12.93□□□□□ -0.34
PRPF38A-201ENST00000257181 C5orf46Q6UWT4 87 aa12.93□□□□□ -0.34
PRPF38A-201ENST00000257181 SLITRK4Q8IW52 837 aa12.93□□□□□ -0.34
PRPF38A-201ENST00000257181 TMEFF1Q8IYR6 380 aa12.93□□□□□ -0.34
PRPF38A-201ENST00000257181 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.93□□□□□ -0.349e-10■■■■■ 32.4
PRPF38A-201ENST00000257181 ZFRQ96KR1 1074 aaKnown RBP12.93□□□□□ -0.34
PRPF38A-201ENST00000257181 MYLK2Q9H1R3 596 aa12.93□□□□□ -0.34
PRPF38A-201ENST00000257181 KLF15Q9UIH9 416 aa12.93□□□□□ -0.34
PRPF38A-201ENST00000257181 ZNF37AP17032 561 aaPredicted RBP12.92□□□□□ -0.34
PRPF38A-201ENST00000257181 ZNF3P17036 446 aa12.92□□□□□ -0.34
PRPF38A-201ENST00000257181 PRKCHP24723 683 aa12.92□□□□□ -0.34
PRPF38A-201ENST00000257181 IL12RB1P42701 662 aa12.92□□□□□ -0.34
PRPF38A-201ENST00000257181 EEF1A1P68104 462 aaKnown RBP12.92□□□□□ -0.34
PRPF38A-201ENST00000257181 EEF1A2Q05639 463 aaKnown RBP12.92□□□□□ -0.34
PRPF38A-201ENST00000257181 GRIN2CQ14957 1233 aa12.92□□□□□ -0.34
PRPF38A-201ENST00000257181 EEF1A1P5Q5VTE0 462 aa12.92□□□□□ -0.34
PRPF38A-201ENST00000257181 PARM1Q6UWI2 310 aa12.92□□□□□ -0.34
PRPF38A-201ENST00000257181 SYVN1Q86TM6 617 aa12.92□□□□□ -0.34
PRPF38A-201ENST00000257181 ZNF671Q8TAW3 534 aa12.92□□□□□ -0.34
PRPF38A-201ENST00000257181 WDR60Q8WVS4 1066 aa12.92□□□□□ -0.34
PRPF38A-201ENST00000257181 PMEPA1Q969W9 287 aa12.92□□□□□ -0.34
PRPF38A-201ENST00000257181 FAM122AQ96E09 287 aa12.92□□□□□ -0.34
PRPF38A-201ENST00000257181 DHRS4Q9BTZ2 278 aa12.92□□□□□ -0.34
PRPF38A-201ENST00000257181 HAO1Q9UJM8 370 aa12.92□□□□□ -0.34
PRPF38A-201ENST00000257181 FADS3Q9Y5Q0 445 aa12.92□□□□□ -0.34
PRPF38A-201ENST00000257181 DHRS12A0PJE2 317 aa12.92□□□□□ -0.34
PRPF38A-201ENST00000257181 CPNE6O95741 557 aa12.92□□□□□ -0.34
PRPF38A-201ENST00000257181 RPLP0P05388 317 aaKnown RBP12.92□□□□□ -0.34
PRPF38A-201ENST00000257181 ABOP16442 354 aa12.92□□□□□ -0.34
PRPF38A-201ENST00000257181 GPR3P46089 330 aa12.92□□□□□ -0.34
PRPF38A-201ENST00000257181 KLHL22Q53GT1 634 aa12.92□□□□□ -0.34
PRPF38A-201ENST00000257181 C9orf50Q5SZB4 431 aa12.92□□□□□ -0.34
PRPF38A-201ENST00000257181 C6orf15Q6UXA7 325 aaPredicted RBP12.92□□□□□ -0.34
PRPF38A-201ENST00000257181 ALDH16A1Q8IZ83 802 aa12.92□□□□□ -0.34
PRPF38A-201ENST00000257181 PGAM4Q8N0Y7 254 aa12.92□□□□□ -0.34
PRPF38A-201ENST00000257181 DDHD1Q8NEL9 900 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms