RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 XKR6Q5GH73 641 aa9.74□□□□□ -0.85
COPB1-201ENST00000249923 EIF3MQ7L2H7 374 aaKnown RBP9.74□□□□□ -0.85
COPB1-201ENST00000249923 NAGSQ8N159 534 aa9.74□□□□□ -0.85
COPB1-201ENST00000249923 RASGEF1AQ8N9B8 481 aa9.74□□□□□ -0.85
COPB1-201ENST00000249923 OR52J3Q8NH60 311 aa9.74□□□□□ -0.85
COPB1-201ENST00000249923 TCEAL4Q96EI5 215 aa9.74□□□□□ -0.85
COPB1-201ENST00000249923 PITX2Q99697 317 aa9.74□□□□□ -0.85
COPB1-201ENST00000249923 CHCHD6Q9BRQ6 235 aa9.74□□□□□ -0.85
COPB1-201ENST00000249923 COQ3Q9NZJ6 369 aa9.74□□□□□ -0.85
COPB1-201ENST00000249923 VPS29Q9UBQ0 182 aa9.74□□□□□ -0.85
COPB1-201ENST00000249923 SAMHD1Q9Y3Z3 626 aaKnown RBP9.74□□□□□ -0.85
COPB1-201ENST00000249923 MYO7AQ13402 2215 aa9.74□□□□□ -0.85
COPB1-201ENST00000249923 M0R129 80 aa9.73□□□□□ -0.85
COPB1-201ENST00000249923 OPN1SWP03999 348 aa9.73□□□□□ -0.85
COPB1-201ENST00000249923 ATXN8OSP0DMR3 200 aa9.73□□□□□ -0.85
COPB1-201ENST00000249923 COX7A2P14406 83 aa9.73□□□□□ -0.85
COPB1-201ENST00000249923 IDSP22304 550 aa9.73□□□□□ -0.85
COPB1-201ENST00000249923 LIPAP38571 399 aa9.73□□□□□ -0.85
COPB1-201ENST00000249923 MNX1P50219 401 aaPredicted RBP9.73□□□□□ -0.85
COPB1-201ENST00000249923 PTPN5P54829 565 aa9.73□□□□□ -0.85
COPB1-201ENST00000249923 C21orf58P58505 322 aa9.73□□□□□ -0.85
COPB1-201ENST00000249923 RPP38P78345 283 aaKnown RBP9.73□□□□□ -0.85
COPB1-201ENST00000249923 ACOX1Q15067 660 aa9.73□□□□□ -0.85
COPB1-201ENST00000249923 PLEKHS1Q5SXH7 462 aa9.73□□□□□ -0.85
COPB1-201ENST00000249923 HENMT1Q5T8I9 393 aaKnown RBP9.73□□□□□ -0.85
COPB1-201ENST00000249923 C1orf52Q8N6N3 182 aaKnown RBP9.73□□□□□ -0.85
COPB1-201ENST00000249923 KCNS3Q9BQ31 491 aa9.73□□□□□ -0.85
COPB1-201ENST00000249923 SPNS1Q9H2V7 528 aa9.73□□□□□ -0.85
COPB1-201ENST00000249923 TRPV5Q9NQA5 729 aa9.73□□□□□ -0.85
COPB1-201ENST00000249923 B3GNT3Q9Y2A9 372 aa9.73□□□□□ -0.85
COPB1-201ENST00000249923 OR2A25A4D2G3 310 aa9.73□□□□□ -0.85
COPB1-201ENST00000249923 PABPN1LA6NDY0 278 aaKnown RBP9.73□□□□□ -0.85
COPB1-201ENST00000249923 IDH3BO43837 385 aa9.73□□□□□ -0.85
COPB1-201ENST00000249923 GSTM1P09488 218 aa9.73□□□□□ -0.85
COPB1-201ENST00000249923 SLC19A1P41440 591 aa9.73□□□□□ -0.85
COPB1-201ENST00000249923 ST13P50502 369 aaKnown RBP9.73□□□□□ -0.85
COPB1-201ENST00000249923 RPS3AP61247 264 aaKnown RBP9.73□□□□□ -0.85
COPB1-201ENST00000249923 MESP2Q0VG99 397 aa9.73□□□□□ -0.85
COPB1-201ENST00000249923 SP140Q13342 867 aa9.73□□□□□ -0.85
COPB1-201ENST00000249923 CAMK2GQ13555 558 aaPredicted RBP9.73□□□□□ -0.85
COPB1-201ENST00000249923 MSANTD1Q6ZTZ1 278 aa9.73□□□□□ -0.85
COPB1-201ENST00000249923 HORMAD1Q86X24 394 aa9.73□□□□□ -0.85
COPB1-201ENST00000249923 SLC44A2Q8IWA5 706 aaPredicted RBP9.73□□□□□ -0.85
COPB1-201ENST00000249923 MMP21Q8N119 569 aa9.73□□□□□ -0.85
COPB1-201ENST00000249923 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.73□□□□□ -0.85
COPB1-201ENST00000249923 CSGALNACT1Q8TDX6 532 aa9.73□□□□□ -0.85
COPB1-201ENST00000249923 VMP1Q96GC9 406 aa9.73□□□□□ -0.85
COPB1-201ENST00000249923 TMEM169Q96HH4 297 aa9.73□□□□□ -0.85
COPB1-201ENST00000249923 LINC00597Q9H2U6 94 aa9.73□□□□□ -0.85
COPB1-201ENST00000249923 FZD4Q9ULV1 537 aa9.73□□□□□ -0.85
COPB1-201ENST00000249923 RNF6Q9Y252 685 aa9.73□□□□□ -0.85
COPB1-201ENST00000249923 ITM2BQ9Y287 266 aa9.73□□□□□ -0.85
COPB1-201ENST00000249923 PCDHB11Q9Y5F2 797 aa9.73□□□□□ -0.85
COPB1-201ENST00000249923 GMPPBQ9Y5P6 360 aa9.73□□□□□ -0.85
COPB1-201ENST00000249923 TTC34A8MYJ7 566 aa9.73□□□□□ -0.85
COPB1-201ENST00000249923 M0R082 166 aa9.73□□□□□ -0.85
COPB1-201ENST00000249923 CCRL2O00421 344 aa9.73□□□□□ -0.85
COPB1-201ENST00000249923 PABPC1P11940 636 aaKnown RBP9.73□□□□□ -0.85
COPB1-201ENST00000249923 IRF8Q02556 426 aa9.73□□□□□ -0.85
COPB1-201ENST00000249923 NPRL3Q12980 569 aa9.73□□□□□ -0.85
COPB1-201ENST00000249923 RGNQ15493 299 aa9.73□□□□□ -0.85
COPB1-201ENST00000249923 RFX4Q33E94 735 aa9.73□□□□□ -0.85
COPB1-201ENST00000249923 SOWAHCQ53LP3 525 aaPredicted RBP9.73□□□□□ -0.85
COPB1-201ENST00000249923 SPOUT1Q5T280 376 aaKnown RBP9.73□□□□□ -0.85
COPB1-201ENST00000249923 KIAA1614Q5VZ46 1190 aa9.73□□□□□ -0.85
COPB1-201ENST00000249923 FAM180BQ6P0A1 224 aa9.73□□□□□ -0.85
COPB1-201ENST00000249923 TCAIMQ8N3R3 496 aa9.73□□□□□ -0.85
COPB1-201ENST00000249923 GPR156Q8NFN8 814 aa9.73□□□□□ -0.85
COPB1-201ENST00000249923 HUS1BQ8NHY5 278 aa9.73□□□□□ -0.85
COPB1-201ENST00000249923 NEIL2Q969S2 332 aa9.73□□□□□ -0.85
COPB1-201ENST00000249923 PPP1R14BQ96C90 147 aa9.73□□□□□ -0.85
COPB1-201ENST00000249923 MRGPRX3Q96LB0 322 aa9.73□□□□□ -0.85
COPB1-201ENST00000249923 RIOK2Q9BVS4 552 aaKnown RBP9.73□□□□□ -0.85
COPB1-201ENST00000249923 NDUFAF4Q9P032 175 aa9.73□□□□□ -0.85
COPB1-201ENST00000249923 SYNDIG1LA6NDD5 238 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 NEDD8-MDP1E9PL57 170 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 SPINT1O43278 529 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 MOSPD3O75425 235 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 LEFTY1O75610 366 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 EPN2O95208 641 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 HIST1H2AGP0C0S8 130 aaPredicted RBP9.72□□□□□ -0.85
COPB1-201ENST00000249923 HLA-EP13747 358 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 HIST1H2ADP20671 130 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 GRK3P35626 688 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 OR1E2P47887 323 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 MC1RQ01726 317 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 MXD1Q05195 221 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 CSTF3Q12996 717 aaKnown RBP9.72□□□□□ -0.85
COPB1-201ENST00000249923 TOP3AQ13472 1001 aaPredicted RBP9.72□□□□□ -0.85
COPB1-201ENST00000249923 NAE1Q13564 534 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 GPR153Q6NV75 609 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 TTC23LQ6PF05 361 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 AGTRAPQ6RW13 159 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 DDX53Q86TM3 631 aaKnown RBP9.72□□□□□ -0.85
COPB1-201ENST00000249923 P2RY8Q86VZ1 359 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 ZNF366Q8N895 744 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 SCAIQ8N9R8 606 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 OR7G3Q8NG95 312 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 OR4K1Q8NGD4 311 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 CYB5D2Q8WUJ1 264 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms