RNA–Protein interactions for RNA: ENST00000246117.8

NCLN-201, Transcript of nicalin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCLN, Length 4,005 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-201ENST00000246117 CLCA4Q14CN2 919 aa13.21□□□□□ -0.29
NCLN-201ENST00000246117 HSD11B1LQ7Z5J1 315 aa13.21□□□□□ -0.29
NCLN-201ENST00000246117 C2orf15Q8WU43 125 aaKnown RBP13.21□□□□□ -0.29
NCLN-201ENST00000246117 TIFAQ96CG3 184 aa13.21□□□□□ -0.29
NCLN-201ENST00000246117 CMTM7Q96FZ5 175 aa13.21□□□□□ -0.29
NCLN-201ENST00000246117 CASD1Q96PB1 797 aa13.21□□□□□ -0.29
NCLN-201ENST00000246117 ALPK1Q96QP1 1244 aa13.21□□□□□ -0.29
NCLN-201ENST00000246117 CITED4Q96RK1 184 aa13.21□□□□□ -0.29
NCLN-201ENST00000246117 RNF6Q9Y252 685 aa13.21□□□□□ -0.29
NCLN-201ENST00000246117 ERI3O43414 337 aaKnown RBP13.21□□□□□ -0.29
NCLN-201ENST00000246117 HPGDP15428 266 aa13.21□□□□□ -0.29
NCLN-201ENST00000246117 HLA-FP30511 346 aa13.21□□□□□ -0.29
NCLN-201ENST00000246117 SPINT3P49223 89 aa13.21□□□□□ -0.29
NCLN-201ENST00000246117 CREMQ03060 361 aa13.21□□□□□ -0.29
NCLN-201ENST00000246117 DSC1Q08554 894 aa13.21□□□□□ -0.29
NCLN-201ENST00000246117 TYSND1Q2T9J0 566 aa13.21□□□□□ -0.29
NCLN-201ENST00000246117 PRAMEF14Q5SWL7 426 aa13.21□□□□□ -0.29
NCLN-201ENST00000246117 PRAMEF13Q5VWM6 474 aa13.21□□□□□ -0.29
NCLN-201ENST00000246117 SCML4Q8N228 414 aa13.21□□□□□ -0.29
NCLN-201ENST00000246117 IQCF1Q8N6M8 205 aa13.21□□□□□ -0.29
NCLN-201ENST00000246117 GPR150Q8NGU9 434 aa13.21□□□□□ -0.29
NCLN-201ENST00000246117 TEX47Q8TBZ9 253 aa13.21□□□□□ -0.29
NCLN-201ENST00000246117 UBE2E3Q969T4 207 aa13.21□□□□□ -0.29
NCLN-201ENST00000246117 KLHL33A6NCF5 533 aa13.21□□□□□ -0.3
NCLN-201ENST00000246117 FRS3O43559 492 aa13.21□□□□□ -0.3
NCLN-201ENST00000246117 RPLP0P05388 317 aaKnown RBP13.21□□□□□ -0.3
NCLN-201ENST00000246117 SAGP10523 405 aaPredicted RBP13.21□□□□□ -0.3
NCLN-201ENST00000246117 ACPPP15309 386 aa13.21□□□□□ -0.3
NCLN-201ENST00000246117 CTGFP29279 349 aa13.21□□□□□ -0.3
NCLN-201ENST00000246117 TALDO1P37837 337 aa13.21□□□□□ -0.3
NCLN-201ENST00000246117 AP1S2P56377 157 aa13.21□□□□□ -0.3
NCLN-201ENST00000246117 DSTNP60981 165 aa13.21□□□□□ -0.3
NCLN-201ENST00000246117 VLDLRP98155 873 aa13.21□□□□□ -0.3
NCLN-201ENST00000246117 IQCCQ4KMZ1 466 aa13.21□□□□□ -0.3
NCLN-201ENST00000246117 SLC35F1Q5T1Q4 408 aa13.21□□□□□ -0.3
NCLN-201ENST00000246117 NANOGNBQ7Z5D8 188 aa13.21□□□□□ -0.3
NCLN-201ENST00000246117 CELF5Q8N6W0 485 aaKnown RBP13.21□□□□□ -0.3
NCLN-201ENST00000246117 ADAMTS15Q8TE58 950 aa13.21□□□□□ -0.3
NCLN-201ENST00000246117 PEX13Q92968 403 aa13.21□□□□□ -0.3
NCLN-201ENST00000246117 PPP1R16AQ96I34 528 aa13.21□□□□□ -0.3
NCLN-201ENST00000246117 THG1LQ9NWX6 298 aaKnown RBP13.21□□□□□ -0.3
NCLN-201ENST00000246117 NDOR1Q9UHB4 597 aa13.21□□□□□ -0.3
NCLN-201ENST00000246117 SNTNA6NMZ2 147 aa13.2□□□□□ -0.3
NCLN-201ENST00000246117 WASH4PA8MWX3 477 aa13.2□□□□□ -0.3
NCLN-201ENST00000246117 J3KTA2 159 aa13.2□□□□□ -0.3
NCLN-201ENST00000246117 AP3D1O14617 1153 aa13.2□□□□□ -0.3
NCLN-201ENST00000246117 NUDT14O95848 222 aa13.2□□□□□ -0.3
NCLN-201ENST00000246117 CLCN7P51798 805 aa13.2□□□□□ -0.3
NCLN-201ENST00000246117 NCBP2P52298 156 aaKnown RBP eCLIP13.2□□□□□ -0.3
NCLN-201ENST00000246117 GRM2Q14416 872 aa13.2□□□□□ -0.3
NCLN-201ENST00000246117 PYCR3Q53H96 274 aa13.2□□□□□ -0.3
NCLN-201ENST00000246117 CEP78Q5JTW2 689 aa13.2□□□□□ -0.3
NCLN-201ENST00000246117 ARMC6Q6NXE6 501 aa13.2□□□□□ -0.3
NCLN-201ENST00000246117 TMPRSS11AQ6ZMR5 421 aa13.2□□□□□ -0.3
NCLN-201ENST00000246117 CEP68Q76N32 757 aa13.2□□□□□ -0.3
NCLN-201ENST00000246117 DSG4Q86SJ6 1040 aa13.2□□□□□ -0.3
NCLN-201ENST00000246117 IGFN1Q86VF2 1251 aa13.2□□□□□ -0.3
NCLN-201ENST00000246117 CHDHQ8NE62 594 aaPredicted RBP13.2□□□□□ -0.3
NCLN-201ENST00000246117 IRF7Q92985 503 aa13.2□□□□□ -0.3
NCLN-201ENST00000246117 SCRN2Q96FV2 425 aa13.2□□□□□ -0.3
NCLN-201ENST00000246117 LHX3Q9UBR4 397 aa13.2□□□□□ -0.3
NCLN-201ENST00000246117 ZNF282Q9UDV7 671 aaPredicted RBP13.2□□□□□ -0.3
NCLN-201ENST00000246117 SPATA2Q9UM82 520 aa13.2□□□□□ -0.3
NCLN-201ENST00000246117 CORO2BQ9UQ03 480 aa13.2□□□□□ -0.3
NCLN-201ENST00000246117 WBP11Q9Y2W2 641 aaKnown RBP13.2□□□□□ -0.3
NCLN-201ENST00000246117 PRR23D1E9PI22 279 aaPredicted RBP13.2□□□□□ -0.3
NCLN-201ENST00000246117 PRR23D2P0DMB1 279 aaPredicted RBP13.2□□□□□ -0.3
NCLN-201ENST00000246117 PTPN2P17706 415 aa13.2□□□□□ -0.3
NCLN-201ENST00000246117 BCAP31P51572 246 aa13.2□□□□□ -0.3
NCLN-201ENST00000246117 SOWAHCQ53LP3 525 aaPredicted RBP13.2□□□□□ -0.3
NCLN-201ENST00000246117 BEND5Q7L4P6 421 aa13.2□□□□□ -0.3
NCLN-201ENST00000246117 WDR53Q7Z5U6 358 aaPredicted RBP13.2□□□□□ -0.3
NCLN-201ENST00000246117 KCNN1Q92952 543 aa13.2□□□□□ -0.3
NCLN-201ENST00000246117 CXorf40BQ96DE9 158 aa13.2□□□□□ -0.3
NCLN-201ENST00000246117 ZBTB20Q9HC78 741 aaPredicted RBP13.2□□□□□ -0.3
NCLN-201ENST00000246117 IL36AQ9UHA7 158 aa13.2□□□□□ -0.3
NCLN-201ENST00000246117 TMEM202A6NGA9 273 aa13.2□□□□□ -0.3
NCLN-201ENST00000246117 C1QTNF3-AMACRE9PGA6 284 aa13.2□□□□□ -0.3
NCLN-201ENST00000246117 ACADMP11310 421 aa13.2□□□□□ -0.3
NCLN-201ENST00000246117 HNMTP50135 292 aa13.2□□□□□ -0.3
NCLN-201ENST00000246117 EMX1Q04741 257 aaPredicted RBP13.2□□□□□ -0.3
NCLN-201ENST00000246117 LEXMQ3ZCV2 418 aa13.2□□□□□ -0.3
NCLN-201ENST00000246117 METTL3Q86U44 580 aaKnown RBP13.2□□□□□ -0.3
NCLN-201ENST00000246117 CCDC116Q8IYX3 515 aa13.2□□□□□ -0.3
NCLN-201ENST00000246117 OR7G3Q8NG95 312 aa13.2□□□□□ -0.3
NCLN-201ENST00000246117 TSPEARQ8WU66 669 aa13.2□□□□□ -0.3
NCLN-201ENST00000246117 BCL7CQ8WUZ0 217 aaPredicted RBP13.2□□□□□ -0.3
NCLN-201ENST00000246117 LINC01599Q8WXQ3 324 aa13.2□□□□□ -0.3
NCLN-201ENST00000246117 NEIL2Q969S2 332 aa13.2□□□□□ -0.3
NCLN-201ENST00000246117 CCM2Q9BSQ5 444 aa13.2□□□□□ -0.3
NCLN-201ENST00000246117 SLC29A3Q9BZD2 475 aa13.2□□□□□ -0.3
NCLN-201ENST00000246117 SLC7A5P2Q9GIP4 190 aa13.2□□□□□ -0.3
NCLN-201ENST00000246117 TM9SF3Q9HD45 589 aa13.2□□□□□ -0.3
NCLN-201ENST00000246117 ZNF225Q9UK10 706 aa13.2□□□□□ -0.3
NCLN-201ENST00000246117 CNOT11Q9UKZ1 510 aaKnown RBP13.2□□□□□ -0.3
NCLN-201ENST00000246117 TAF1LQ8IZX4 1826 aa13.19□□□□□ -0.3
NCLN-201ENST00000246117 ARHGEF33A8MVX0 844 aa13.19□□□□□ -0.3
NCLN-201ENST00000246117 H0YAE9 185 aa13.19□□□□□ -0.3
NCLN-201ENST00000246117 SLC9A3R1O14745 358 aaPredicted RBP13.19□□□□□ -0.3
NCLN-201ENST00000246117 PDPK1O15530 556 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms