RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 HSD17B2P37059 387 aa15.51■□□□□ 0.07
UBE3D-201ENST00000237186 IL12RB1P42701 662 aa15.51■□□□□ 0.07
UBE3D-201ENST00000237186 CLK3P49761 638 aaKnown RBP15.51■□□□□ 0.07
UBE3D-201ENST00000237186 SELENOWP63302 87 aa15.51■□□□□ 0.07
UBE3D-201ENST00000237186 FADDQ13158 208 aa15.51■□□□□ 0.07
UBE3D-201ENST00000237186 MPEG1Q2M385 716 aa15.51■□□□□ 0.07
UBE3D-201ENST00000237186 PRAMEF14Q5SWL7 426 aa15.51■□□□□ 0.07
UBE3D-201ENST00000237186 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.51■□□□□ 0.07
UBE3D-201ENST00000237186 PRAMEF13Q5VWM6 474 aa15.51■□□□□ 0.07
UBE3D-201ENST00000237186 CCDC80Q76M96 950 aa15.51■□□□□ 0.07
UBE3D-201ENST00000237186 VN1R5Q7Z5H4 357 aa15.51■□□□□ 0.07
UBE3D-201ENST00000237186 GALNT10Q86SR1 603 aa15.51■□□□□ 0.07
UBE3D-201ENST00000237186 AMZ2Q86W34 360 aa15.51■□□□□ 0.07
UBE3D-201ENST00000237186 MMAAQ8IVH4 418 aaKnown RBP15.51■□□□□ 0.07
UBE3D-201ENST00000237186 DCUN1D3Q8IWE4 304 aa15.51■□□□□ 0.07
UBE3D-201ENST00000237186 SFTPA1Q8IWL2 248 aa15.51■□□□□ 0.07
UBE3D-201ENST00000237186 RAB2BQ8WUD1 216 aa15.51■□□□□ 0.07
UBE3D-201ENST00000237186 SGCDQ92629 289 aa15.51■□□□□ 0.07
UBE3D-201ENST00000237186 MUL1Q969V5 352 aa15.51■□□□□ 0.07
UBE3D-201ENST00000237186 NAA50Q9GZZ1 169 aaKnown RBP15.51■□□□□ 0.07
UBE3D-201ENST00000237186 LHPPQ9H008 270 aa15.51■□□□□ 0.07
UBE3D-201ENST00000237186 RHBGQ9H310 441 aa15.51■□□□□ 0.07
UBE3D-201ENST00000237186 GPN2Q9H9Y4 310 aaPredicted RBP15.51■□□□□ 0.07
UBE3D-201ENST00000237186 PRSS16Q9NQE7 514 aa15.51■□□□□ 0.07
UBE3D-201ENST00000237186 C1GALT1Q9NS00 363 aa15.51■□□□□ 0.07
UBE3D-201ENST00000237186 GDE1Q9NZC3 331 aa15.51■□□□□ 0.07
UBE3D-201ENST00000237186 ASF1AQ9Y294 204 aa15.51■□□□□ 0.07
UBE3D-201ENST00000237186 WBP11Q9Y2W2 641 aaKnown RBP15.51■□□□□ 0.07
UBE3D-201ENST00000237186 PCYT1BQ9Y5K3 369 aaPredicted RBP15.51■□□□□ 0.07
UBE3D-201ENST00000237186 MYO1GB0I1T2 1018 aa15.5■□□□□ 0.07
UBE3D-201ENST00000237186 C9P02748 559 aa15.5■□□□□ 0.07
UBE3D-201ENST00000237186 PCMT1P22061 227 aa15.5■□□□□ 0.07
UBE3D-201ENST00000237186 FCHO2Q0JRZ9 810 aa15.5■□□□□ 0.07
UBE3D-201ENST00000237186 C2orf80Q0P641 193 aa15.5■□□□□ 0.07
UBE3D-201ENST00000237186 PIP5KL1Q5T9C9 394 aa15.5■□□□□ 0.07
UBE3D-201ENST00000237186 FAM46CQ5VWP2 391 aa15.5■□□□□ 0.07
UBE3D-201ENST00000237186 PNCKQ6P2M8 343 aa15.5■□□□□ 0.07
UBE3D-201ENST00000237186 CRTC3Q6UUV7 619 aa15.5■□□□□ 0.07
UBE3D-201ENST00000237186 TMIGD1Q6UXZ0 262 aa15.5■□□□□ 0.07
UBE3D-201ENST00000237186 ADGRD2Q7Z7M1 963 aa15.5■□□□□ 0.07
UBE3D-201ENST00000237186 TSPYL5Q86VY4 417 aaPredicted RBP15.5■□□□□ 0.07
UBE3D-201ENST00000237186 OXR1Q8N573 874 aa15.5■□□□□ 0.07
UBE3D-201ENST00000237186 PLA2G15Q8NCC3 412 aa15.5■□□□□ 0.07
UBE3D-201ENST00000237186 OR4K1Q8NGD4 311 aa15.5■□□□□ 0.07
UBE3D-201ENST00000237186 PPCDCQ96CD2 204 aa15.5■□□□□ 0.07
UBE3D-201ENST00000237186 NODALQ96S42 347 aa15.5■□□□□ 0.07
UBE3D-201ENST00000237186 DUSP21Q9H596 190 aa15.5■□□□□ 0.07
UBE3D-201ENST00000237186 THUMPD1Q9NXG2 353 aaKnown RBP15.5■□□□□ 0.07
UBE3D-201ENST00000237186 ICKQ9UPZ9 632 aa15.5■□□□□ 0.07
UBE3D-201ENST00000237186 PCDHGB3Q9Y5G1 929 aa15.5■□□□□ 0.07
UBE3D-201ENST00000237186 MUC22E2RYF6 1773 aaPredicted RBP15.5■□□□□ 0.07
UBE3D-201ENST00000237186 NUP210Q8TEM1 1887 aaPredicted RBP15.5■□□□□ 0.07
UBE3D-201ENST00000237186 TBC1D3BA6NDS4 549 aa15.5■□□□□ 0.07
UBE3D-201ENST00000237186 DIRAS1O95057 198 aa15.5■□□□□ 0.07
UBE3D-201ENST00000237186 C6orf47O95873 294 aa15.5■□□□□ 0.07
UBE3D-201ENST00000237186 NTRK1P04629 796 aa15.5■□□□□ 0.07
UBE3D-201ENST00000237186 CCNA2P20248 432 aa15.5■□□□□ 0.07
UBE3D-201ENST00000237186 OPRD1P41143 372 aa15.5■□□□□ 0.07
UBE3D-201ENST00000237186 TAS2R50P59544 299 aa15.5■□□□□ 0.07
UBE3D-201ENST00000237186 CNTN1Q12860 1018 aa15.5■□□□□ 0.07
UBE3D-201ENST00000237186 GPM6BQ13491 265 aa15.5■□□□□ 0.07
UBE3D-201ENST00000237186 TSTA3Q13630 321 aaPredicted RBP15.5■□□□□ 0.07
UBE3D-201ENST00000237186 AGERQ15109 404 aa15.5■□□□□ 0.07
UBE3D-201ENST00000237186 METRNLQ641Q3 311 aa15.5■□□□□ 0.07
UBE3D-201ENST00000237186 FAM109BQ6ICB4 259 aaPredicted RBP15.5■□□□□ 0.07
UBE3D-201ENST00000237186 EP400NLQ6ZTU2 488 aa15.5■□□□□ 0.07
UBE3D-201ENST00000237186 TSEN54Q7Z6J9 526 aaKnown RBP15.5■□□□□ 0.07
UBE3D-201ENST00000237186 CROCCP3Q8IVE0 287 aa15.5■□□□□ 0.07
UBE3D-201ENST00000237186 ZC3H7AQ8IWR0 971 aaKnown RBP15.5■□□□□ 0.07
UBE3D-201ENST00000237186 KRT78Q8N1N4 520 aa15.5■□□□□ 0.07
UBE3D-201ENST00000237186 LMNTD1Q8N9Z9 388 aa15.5■□□□□ 0.07
UBE3D-201ENST00000237186 TFGQ92734 400 aaPredicted RBP15.5■□□□□ 0.07
UBE3D-201ENST00000237186 MAL2Q969L2 176 aa15.5■□□□□ 0.07
UBE3D-201ENST00000237186 PITX2Q99697 317 aa15.5■□□□□ 0.07
UBE3D-201ENST00000237186 TAS2R9Q9NYW1 312 aa15.5■□□□□ 0.07
UBE3D-201ENST00000237186 HCN2Q9UL51 889 aa15.5■□□□□ 0.07
UBE3D-201ENST00000237186 TMEM98Q9Y2Y6 226 aa15.5■□□□□ 0.07
UBE3D-201ENST00000237186 HEMK1Q9Y5R4 338 aaPredicted RBP15.5■□□□□ 0.07
UBE3D-201ENST00000237186 SNX5Q9Y5X3 404 aa15.5■□□□□ 0.07
UBE3D-201ENST00000237186 A0A1W2PPW3 197 aa15.49■□□□□ 0.07
UBE3D-201ENST00000237186 ANKRD33BA6NCL7 494 aa15.49■□□□□ 0.07
UBE3D-201ENST00000237186 MRPS14O60783 128 aaKnown RBP15.49■□□□□ 0.07
UBE3D-201ENST00000237186 TBX19O60806 448 aa15.49■□□□□ 0.07
UBE3D-201ENST00000237186 NOL3O60936 208 aaKnown RBP15.49■□□□□ 0.07
UBE3D-201ENST00000237186 SEMA3DO95025 777 aa15.49■□□□□ 0.07
UBE3D-201ENST00000237186 ANGPTL1O95841 491 aa15.49■□□□□ 0.07
UBE3D-201ENST00000237186 CA3P07451 260 aa15.49■□□□□ 0.07
UBE3D-201ENST00000237186 FSHRP23945 695 aa15.49■□□□□ 0.07
UBE3D-201ENST00000237186 PLA2G16P53816 162 aa15.49■□□□□ 0.07
UBE3D-201ENST00000237186 IL5RAQ01344 420 aa15.49■□□□□ 0.07
UBE3D-201ENST00000237186 MC1RQ01726 317 aa15.49■□□□□ 0.07
UBE3D-201ENST00000237186 EEF1A2Q05639 463 aaKnown RBP15.49■□□□□ 0.07
UBE3D-201ENST00000237186 CAMK2GQ13555 558 aaPredicted RBP15.49■□□□□ 0.07
UBE3D-201ENST00000237186 LAPTM4AQ15012 233 aa15.49■□□□□ 0.07
UBE3D-201ENST00000237186 CYP2A13Q16696 494 aa15.49■□□□□ 0.07
UBE3D-201ENST00000237186 FGD3Q5JSP0 725 aa15.49■□□□□ 0.07
UBE3D-201ENST00000237186 C9orf50Q5SZB4 431 aa15.49■□□□□ 0.07
UBE3D-201ENST00000237186 KIAA1614Q5VZ46 1190 aa15.49■□□□□ 0.07
UBE3D-201ENST00000237186 TRIM40Q6P9F5 258 aa15.49■□□□□ 0.07
UBE3D-201ENST00000237186 GALNT5Q7Z7M9 940 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms