RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 FOLR3P41439 243 aa10.72□□□□□ -0.69
SF3B6-201ENST00000233468 AGTR2P50052 363 aa10.72□□□□□ -0.69
SF3B6-201ENST00000233468 MEF2AQ02078 507 aaPredicted RBP10.72□□□□□ -0.69
SF3B6-201ENST00000233468 DOC2AQ14183 400 aa10.72□□□□□ -0.69
SF3B6-201ENST00000233468 KRT71Q3SY84 523 aa10.72□□□□□ -0.69
SF3B6-201ENST00000233468 FBXO48Q5FWF7 155 aa10.72□□□□□ -0.69
SF3B6-201ENST00000233468 C10orf62Q5T681 223 aaPredicted RBP10.72□□□□□ -0.69
SF3B6-201ENST00000233468 TMEM214Q6NUQ4 689 aaKnown RBP10.72□□□□□ -0.69
SF3B6-201ENST00000233468 MED27Q6P2C8 311 aa10.72□□□□□ -0.69
SF3B6-201ENST00000233468 C16orf46Q6P387 395 aa10.72□□□□□ -0.69
SF3B6-201ENST00000233468 OVCH1Q7RTY7 1134 aa10.72□□□□□ -0.69
SF3B6-201ENST00000233468 VN1R4Q7Z5H5 301 aa10.72□□□□□ -0.69
SF3B6-201ENST00000233468 RAB43Q86YS6 212 aa10.72□□□□□ -0.69
SF3B6-201ENST00000233468 MYLK4Q86YV6 388 aaPredicted RBP10.72□□□□□ -0.69
SF3B6-201ENST00000233468 HOMEZQ8IX15 550 aa10.72□□□□□ -0.69
SF3B6-201ENST00000233468 CCDC63Q8NA47 563 aa10.72□□□□□ -0.69
SF3B6-201ENST00000233468 SRFBP1Q8NEF9 429 aaKnown RBP10.72□□□□□ -0.69
SF3B6-201ENST00000233468 OR2W6PQ8NHA6 318 aa10.72□□□□□ -0.69
SF3B6-201ENST00000233468 RDH11Q8TC12 318 aa10.72□□□□□ -0.69
SF3B6-201ENST00000233468 SREK1Q8WXA9 508 aaKnown RBP10.72□□□□□ -0.69
SF3B6-201ENST00000233468 THAP4Q8WY91 577 aa10.72□□□□□ -0.69
SF3B6-201ENST00000233468 RNF31Q96EP0 1072 aa10.72□□□□□ -0.69
SF3B6-201ENST00000233468 MMABQ96EY8 250 aaPredicted RBP10.72□□□□□ -0.69
SF3B6-201ENST00000233468 FAR2Q96K12 515 aa10.72□□□□□ -0.69
SF3B6-201ENST00000233468 C10orf90Q96M02 699 aa10.72□□□□□ -0.69
SF3B6-201ENST00000233468 SMC6Q96SB8 1091 aa10.72□□□□□ -0.69
SF3B6-201ENST00000233468 ARHGAP9Q9BRR9 750 aa10.72□□□□□ -0.69
SF3B6-201ENST00000233468 CENPKQ9BS16 269 aa10.72□□□□□ -0.69
SF3B6-201ENST00000233468 YIPF2Q9BWQ6 316 aa10.72□□□□□ -0.69
SF3B6-201ENST00000233468 STMN4Q9H169 189 aaPredicted RBP10.72□□□□□ -0.69
SF3B6-201ENST00000233468 SLC26A1Q9H2B4 701 aa10.72□□□□□ -0.69
SF3B6-201ENST00000233468 IPPKQ9H8X2 491 aa10.72□□□□□ -0.69
SF3B6-201ENST00000233468 ACTR8Q9H981 624 aa10.72□□□□□ -0.69
SF3B6-201ENST00000233468 MKKSQ9NPJ1 570 aaPredicted RBP10.72□□□□□ -0.69
SF3B6-201ENST00000233468 C14orf105Q9NVL8 296 aa10.72□□□□□ -0.69
SF3B6-201ENST00000233468 ARGLU1Q9NWB6 273 aaPredicted RBP10.72□□□□□ -0.69
SF3B6-201ENST00000233468 ZNF282Q9UDV7 671 aaPredicted RBP10.72□□□□□ -0.69
SF3B6-201ENST00000233468 TCFL5Q9UL49 500 aa10.72□□□□□ -0.69
SF3B6-201ENST00000233468 PCDHGA11Q9Y5H2 935 aa10.72□□□□□ -0.69
SF3B6-201ENST00000233468 NBASA2RRP1 2371 aa10.72□□□□□ -0.69
SF3B6-201ENST00000233468 A0A1W2PPM1 405 aa10.71□□□□□ -0.69
SF3B6-201ENST00000233468 GOLGA6L10A6NI86 522 aa10.71□□□□□ -0.69
SF3B6-201ENST00000233468 PCDH17O14917 1159 aa10.71□□□□□ -0.69
SF3B6-201ENST00000233468 RGS16O15492 202 aaPredicted RBP10.71□□□□□ -0.69
SF3B6-201ENST00000233468 SUV39H1O43463 412 aa10.71□□□□□ -0.69
SF3B6-201ENST00000233468 WFS1O76024 890 aa10.71□□□□□ -0.69
SF3B6-201ENST00000233468 CLDN9O95484 217 aa10.71□□□□□ -0.69
SF3B6-201ENST00000233468 OTCP00480 354 aa10.71□□□□□ -0.69
SF3B6-201ENST00000233468 MYL2P10916 166 aa10.71□□□□□ -0.69
SF3B6-201ENST00000233468 ALOX12P18054 663 aa10.71□□□□□ -0.69
SF3B6-201ENST00000233468 IL10P22301 178 aa10.71□□□□□ -0.69
SF3B6-201ENST00000233468 OR1D4P47884 311 aa10.71□□□□□ -0.69
SF3B6-201ENST00000233468 CCNG1P51959 295 aa10.71□□□□□ -0.69
SF3B6-201ENST00000233468 HERVK_113P63132 956 aa10.71□□□□□ -0.69
SF3B6-201ENST00000233468 SLC18A2Q05940 514 aa10.71□□□□□ -0.69
SF3B6-201ENST00000233468 ASPHQ12797 758 aa10.71□□□□□ -0.69
SF3B6-201ENST00000233468 CDC20Q12834 499 aa10.71□□□□□ -0.69
SF3B6-201ENST00000233468 SSPNQ14714 243 aa10.71□□□□□ -0.69
SF3B6-201ENST00000233468 UGT8Q16880 541 aa10.71□□□□□ -0.69
SF3B6-201ENST00000233468 FAM198BQ6UWH4 519 aa10.71□□□□□ -0.69
SF3B6-201ENST00000233468 LRIG3Q6UXM1 1119 aa10.71□□□□□ -0.69
SF3B6-201ENST00000233468 CHSY3Q70JA7 882 aa10.71□□□□□ -0.69
SF3B6-201ENST00000233468 GOLGA7Q7Z5G4 137 aa10.71□□□□□ -0.69
SF3B6-201ENST00000233468 RETREG3Q86VR2 466 aa10.71□□□□□ -0.69
SF3B6-201ENST00000233468 OR2Y1Q8NGV0 311 aa10.71□□□□□ -0.69
SF3B6-201ENST00000233468 CCT6BQ92526 530 aa10.71□□□□□ -0.69
SF3B6-201ENST00000233468 MIEF2Q96C03 454 aa10.71□□□□□ -0.69
SF3B6-201ENST00000233468 PKNOX2Q96KN3 472 aa10.71□□□□□ -0.69
SF3B6-201ENST00000233468 RUFY1Q96T51 708 aa10.71□□□□□ -0.69
SF3B6-201ENST00000233468 C1QTNF3Q9BXJ4 246 aa10.71□□□□□ -0.69
SF3B6-201ENST00000233468 ERVK-6Q9BXR3 956 aa10.71□□□□□ -0.69
SF3B6-201ENST00000233468 ROGDIQ9GZN7 287 aa10.71□□□□□ -0.69
SF3B6-201ENST00000233468 RHBGQ9H310 441 aa10.71□□□□□ -0.69
SF3B6-201ENST00000233468 AKIRIN1Q9H9L7 192 aaPredicted RBP10.71□□□□□ -0.69
SF3B6-201ENST00000233468 TMEM216Q9P0N5 145 aa10.71□□□□□ -0.69
SF3B6-201ENST00000233468 POLHQ9Y253 713 aa10.71□□□□□ -0.69
SF3B6-201ENST00000233468 PTRH2Q9Y3E5 179 aaKnown RBP10.71□□□□□ -0.69
SF3B6-201ENST00000233468 MAP4K5Q9Y4K4 846 aa10.71□□□□□ -0.69
SF3B6-201ENST00000233468 HEMK1Q9Y5R4 338 aaPredicted RBP10.71□□□□□ -0.69
SF3B6-201ENST00000233468 MAU2Q9Y6X3 613 aa10.71□□□□□ -0.69
SF3B6-201ENST00000233468 A0A0A6YYC8 382 aaPredicted RBP10.7□□□□□ -0.7
SF3B6-201ENST00000233468 CDC14CA4D256 554 aa10.7□□□□□ -0.7
SF3B6-201ENST00000233468 A8MT66 165 aa10.7□□□□□ -0.7
SF3B6-201ENST00000233468 H3BQF6 201 aa10.7□□□□□ -0.7
SF3B6-201ENST00000233468 I3L1I5 382 aaPredicted RBP10.7□□□□□ -0.7
SF3B6-201ENST00000233468 PEX12O00623 359 aa10.7□□□□□ -0.7
SF3B6-201ENST00000233468 E2F3O00716 465 aa10.7□□□□□ -0.7
SF3B6-201ENST00000233468 NKX2-8O15522 239 aa10.7□□□□□ -0.7
SF3B6-201ENST00000233468 P2RX6O15547 441 aa10.7□□□□□ -0.7
SF3B6-201ENST00000233468 SIX3O95343 332 aaPredicted RBP10.7□□□□□ -0.7
SF3B6-201ENST00000233468 MLYCDO95822 493 aa10.7□□□□□ -0.7
SF3B6-201ENST00000233468 CAPN1P07384 714 aa10.7□□□□□ -0.7
SF3B6-201ENST00000233468 CYC1P08574 325 aa10.7□□□□□ -0.7
SF3B6-201ENST00000233468 PRKAR1AP10644 381 aa10.7□□□□□ -0.7
SF3B6-201ENST00000233468 IMPDH1P20839 514 aa10.7□□□□□ -0.7
SF3B6-201ENST00000233468 F8A1P23610 371 aa10.7□□□□□ -0.7
SF3B6-201ENST00000233468 MMP16P51512 607 aa10.7□□□□□ -0.7
SF3B6-201ENST00000233468 PRKAA2P54646 552 aa10.7□□□□□ -0.7
SF3B6-201ENST00000233468 E2F2Q14209 437 aa10.7□□□□□ -0.7
SF3B6-201ENST00000233468 RCN2Q14257 317 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms