RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 NOTUMQ6P988 496 aa12.56□□□□□ -0.4
MSH2-201ENST00000233146 ZNF605Q86T29 641 aa12.56□□□□□ -0.4
MSH2-201ENST00000233146 SLC51AQ86UW1 340 aa12.56□□□□□ -0.4
MSH2-201ENST00000233146 TRMT2BQ96GJ1 504 aaKnown RBP12.56□□□□□ -0.4
MSH2-201ENST00000233146 MED18Q9BUE0 208 aa12.56□□□□□ -0.4
MSH2-201ENST00000233146 PTDSS2Q9BVG9 487 aa12.56□□□□□ -0.4
MSH2-201ENST00000233146 KCNH6Q9H252 994 aa12.56□□□□□ -0.4
MSH2-201ENST00000233146 PPIEQ9UNP9 301 aaKnown RBP12.56□□□□□ -0.4
MSH2-201ENST00000233146 ZNF451Q9Y4E5 1061 aa12.56□□□□□ -0.4
MSH2-201ENST00000233146 TRBV23-1A0A0A0MS06 115 aa12.55□□□□□ -0.4
MSH2-201ENST00000233146 HYKKA2RU49 373 aa12.55□□□□□ -0.4
MSH2-201ENST00000233146 IFRD1O00458 451 aaPredicted RBP12.55□□□□□ -0.4
MSH2-201ENST00000233146 E2F3O00716 465 aa12.55□□□□□ -0.4
MSH2-201ENST00000233146 ARFIP1P53367 373 aa12.55□□□□□ -0.4
MSH2-201ENST00000233146 SLC6A3Q01959 620 aa12.55□□□□□ -0.4
MSH2-201ENST00000233146 P2RY14Q15391 338 aa12.55□□□□□ -0.4
MSH2-201ENST00000233146 INO80DQ53TQ3 878 aaPredicted RBP12.55□□□□□ -0.4
MSH2-201ENST00000233146 PAN3Q58A45 887 aaKnown RBP12.55□□□□□ -0.4
MSH2-201ENST00000233146 MFSD14BQ5SR56 506 aa12.55□□□□□ -0.4
MSH2-201ENST00000233146 SPOUT1Q5T280 376 aaKnown RBP12.55□□□□□ -0.4
MSH2-201ENST00000233146 PYHIN1Q6K0P9 492 aa12.55□□□□□ -0.4
MSH2-201ENST00000233146 UNC5DQ6UXZ4 953 aa12.55□□□□□ -0.4
MSH2-201ENST00000233146 C3P1Q6ZMU1 363 aa12.55□□□□□ -0.4
MSH2-201ENST00000233146 KRT77Q7Z794 578 aa12.55□□□□□ -0.4
MSH2-201ENST00000233146 B3GNT7Q8NFL0 401 aa12.55□□□□□ -0.4
MSH2-201ENST00000233146 OR2T11Q8NH01 316 aa12.55□□□□□ -0.4
MSH2-201ENST00000233146 IL31RAQ8NI17 732 aa12.55□□□□□ -0.4
MSH2-201ENST00000233146 LRRC46Q96FV0 321 aa12.55□□□□□ -0.4
MSH2-201ENST00000233146 TOX2Q96NM4 488 aa12.55□□□□□ -0.4
MSH2-201ENST00000233146 ERMAPQ96PL5 475 aaPredicted RBP12.55□□□□□ -0.4
MSH2-201ENST00000233146 SARGQ9BW04 601 aa12.55□□□□□ -0.4
MSH2-201ENST00000233146 ARHGAP39Q9C0H5 1083 aa12.55□□□□□ -0.4
MSH2-201ENST00000233146 ANKRA2Q9H9E1 313 aa12.55□□□□□ -0.4
MSH2-201ENST00000233146 ZNF226Q9NYT6 803 aa12.55□□□□□ -0.4
MSH2-201ENST00000233146 RCOR3Q9P2K3 495 aaPredicted RBP12.55□□□□□ -0.4
MSH2-201ENST00000233146 CFAP20Q9Y6A4 193 aaKnown RBP12.55□□□□□ -0.4
MSH2-201ENST00000233146 ZNF638Q14966 1978 aaKnown RBP12.55□□□□□ -0.4
MSH2-201ENST00000233146 LZTS3O60299 673 aaPredicted RBP12.55□□□□□ -0.4
MSH2-201ENST00000233146 WISP3O95389 354 aaPredicted RBP12.55□□□□□ -0.4
MSH2-201ENST00000233146 EDN1P05305 212 aa12.55□□□□□ -0.4
MSH2-201ENST00000233146 PFKMP08237 780 aa12.55□□□□□ -0.4
MSH2-201ENST00000233146 PSMA1P25786 263 aaKnown RBP12.55□□□□□ -0.4
MSH2-201ENST00000233146 PLA1AQ53H76 456 aa12.55□□□□□ -0.4
MSH2-201ENST00000233146 VASNQ6EMK4 673 aa12.55□□□□□ -0.4
MSH2-201ENST00000233146 TMEM207Q6UWW9 146 aa12.55□□□□□ -0.4
MSH2-201ENST00000233146 KRT74Q7RTS7 529 aa12.55□□□□□ -0.4
MSH2-201ENST00000233146 SLC16A13Q7RTY0 426 aa12.55□□□□□ -0.4
MSH2-201ENST00000233146 STX12Q86Y82 276 aa12.55□□□□□ -0.4
MSH2-201ENST00000233146 NUDT8Q8WV74 236 aa12.55□□□□□ -0.4
MSH2-201ENST00000233146 ELP4Q96EB1 424 aa12.55□□□□□ -0.4
MSH2-201ENST00000233146 MRPS24Q96EL2 167 aaKnown RBP12.55□□□□□ -0.4
MSH2-201ENST00000233146 TREX2Q9BQ50 279 aaPredicted RBP12.55□□□□□ -0.4
MSH2-201ENST00000233146 PAPOLGQ9BWT3 736 aaKnown RBP12.55□□□□□ -0.4
MSH2-201ENST00000233146 DNTTIP1Q9H147 329 aa12.55□□□□□ -0.4
MSH2-201ENST00000233146 ACTL8Q9H568 366 aa12.55□□□□□ -0.4
MSH2-201ENST00000233146 POMT2Q9UKY4 750 aa12.55□□□□□ -0.4
MSH2-201ENST00000233146 SLC6A5Q9Y345 797 aa12.55□□□□□ -0.4
MSH2-201ENST00000233146 DGAT1O75907 488 aa12.55□□□□□ -0.4
MSH2-201ENST00000233146 STBD1O95210 358 aa12.55□□□□□ -0.4
MSH2-201ENST00000233146 RLN2P04090 185 aa12.55□□□□□ -0.4
MSH2-201ENST00000233146 HLA-DOAP06340 250 aa12.55□□□□□ -0.4
MSH2-201ENST00000233146 SYN1P17600 705 aa12.55□□□□□ -0.4
MSH2-201ENST00000233146 S100PP25815 95 aa12.55□□□□□ -0.4
MSH2-201ENST00000233146 PBX3P40426 434 aa12.55□□□□□ -0.4
MSH2-201ENST00000233146 MATKP42679 507 aa12.55□□□□□ -0.4
MSH2-201ENST00000233146 ALDH9A1P49189 494 aa12.55□□□□□ -0.4
MSH2-201ENST00000233146 STARP49675 285 aa12.55□□□□□ -0.4
MSH2-201ENST00000233146 JAK3P52333 1124 aa12.55□□□□□ -0.4
MSH2-201ENST00000233146 OPCMLQ14982 345 aa12.55□□□□□ -0.4
MSH2-201ENST00000233146 C6orf136Q5SQH8 315 aa12.55□□□□□ -0.4
MSH2-201ENST00000233146 SLC25A25Q6KCM7 469 aa12.55□□□□□ -0.4
MSH2-201ENST00000233146 SUSD1Q6UWL2 747 aa12.55□□□□□ -0.4
MSH2-201ENST00000233146 TMEM179Q6ZVK1 233 aa12.55□□□□□ -0.4
MSH2-201ENST00000233146 SHFQ7M4L6 423 aa12.55□□□□□ -0.4
MSH2-201ENST00000233146 ZER1Q7Z7L7 766 aa12.55□□□□□ -0.4
MSH2-201ENST00000233146 MIB1Q86YT6 1006 aa12.55□□□□□ -0.4
MSH2-201ENST00000233146 SFXN2Q96NB2 322 aa12.55□□□□□ -0.4
MSH2-201ENST00000233146 KCNC2Q96PR1 638 aa12.55□□□□□ -0.4
MSH2-201ENST00000233146 SLC38A3Q99624 504 aa12.55□□□□□ -0.4
MSH2-201ENST00000233146 CRISPLD1Q9H336 500 aa12.55□□□□□ -0.4
MSH2-201ENST00000233146 DLL4Q9NR61 685 aa12.55□□□□□ -0.4
MSH2-201ENST00000233146 PPP1R14DQ9NXH3 145 aa12.55□□□□□ -0.4
MSH2-201ENST00000233146 UBIAD1Q9Y5Z9 338 aa12.55□□□□□ -0.4
MSH2-201ENST00000233146 MEIKINA0A087WXM9 373 aa12.54□□□□□ -0.4
MSH2-201ENST00000233146 LCHNA4D1U4 455 aa12.54□□□□□ -0.4
MSH2-201ENST00000233146 RPS6KA4O75676 772 aa12.54□□□□□ -0.4
MSH2-201ENST00000233146 DHFRP00374 187 aa12.54□□□□□ -0.4
MSH2-201ENST00000233146 RHCEP18577 417 aa12.54□□□□□ -0.4
MSH2-201ENST00000233146 EMC2Q15006 297 aa12.54□□□□□ -0.4
MSH2-201ENST00000233146 TEAD4Q15561 434 aa12.54□□□□□ -0.4
MSH2-201ENST00000233146 ZNF789Q5FWF6 425 aa12.54□□□□□ -0.4
MSH2-201ENST00000233146 METAP1DQ6UB28 335 aaPredicted RBP12.54□□□□□ -0.4
MSH2-201ENST00000233146 MSRB3Q8IXL7 192 aa12.54□□□□□ -0.4
MSH2-201ENST00000233146 DENND6BQ8NEG7 585 aa12.54□□□□□ -0.4
MSH2-201ENST00000233146 TSPAN17Q96FV3 270 aa12.54□□□□□ -0.4
MSH2-201ENST00000233146 ZNF599Q96NL3 588 aa12.54□□□□□ -0.4
MSH2-201ENST00000233146 CCM2Q9BSQ5 444 aa12.54□□□□□ -0.4
MSH2-201ENST00000233146 SEMA4CQ9C0C4 833 aa12.54□□□□□ -0.4
MSH2-201ENST00000233146 SIK2Q9H0K1 926 aa12.54□□□□□ -0.4
MSH2-201ENST00000233146 ABCG4Q9H172 646 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms