RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 FOLR3P41439 243 aa12.98□□□□□ -0.33
VEGFA-201ENST00000230480 SLCO1A2P46721 670 aa12.98□□□□□ -0.33
VEGFA-201ENST00000230480 ALDH18A1P54886 795 aaKnown RBP12.98□□□□□ -0.33
VEGFA-201ENST00000230480 HNRNPH2P55795 449 aaKnown RBP12.98□□□□□ -0.33
VEGFA-201ENST00000230480 SOX8P57073 446 aa12.98□□□□□ -0.33
VEGFA-201ENST00000230480 RAB8AP61006 207 aa12.98□□□□□ -0.33
VEGFA-201ENST00000230480 OLR1P78380 273 aa12.98□□□□□ -0.33
VEGFA-201ENST00000230480 KCNAB2Q13303 367 aa12.98□□□□□ -0.33
VEGFA-201ENST00000230480 RASA2Q15283 850 aa12.98□□□□□ -0.33
VEGFA-201ENST00000230480 RBBP5Q15291 538 aaKnown RBP12.98□□□□□ -0.33
VEGFA-201ENST00000230480 PDK4Q16654 411 aa12.98□□□□□ -0.33
VEGFA-201ENST00000230480 TMEM205Q6UW68 189 aa12.98□□□□□ -0.33
VEGFA-201ENST00000230480 TMIGD1Q6UXZ0 262 aa12.98□□□□□ -0.33
VEGFA-201ENST00000230480 LAS2Q8IYD9 372 aa12.98□□□□□ -0.33
VEGFA-201ENST00000230480 TEX9Q8N6V9 391 aa12.98□□□□□ -0.33
VEGFA-201ENST00000230480 PTGR2Q8N8N7 351 aaPredicted RBP12.98□□□□□ -0.33
VEGFA-201ENST00000230480 OR11G2Q8NGC1 345 aa12.98□□□□□ -0.33
VEGFA-201ENST00000230480 OR51Q1Q8NH59 317 aa12.98□□□□□ -0.33
VEGFA-201ENST00000230480 ZNF473Q8WTR7 871 aaKnown RBP12.98□□□□□ -0.33
VEGFA-201ENST00000230480 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.98□□□□□ -0.335e-12■■■■■ 41.4
VEGFA-201ENST00000230480 C8orf44Q96CB5 159 aa12.98□□□□□ -0.33
VEGFA-201ENST00000230480 MS4A6EQ96DS6 147 aa12.98□□□□□ -0.33
VEGFA-201ENST00000230480 ING2Q9H160 280 aa12.98□□□□□ -0.33
VEGFA-201ENST00000230480 PRDM7Q9NQW5 492 aa12.98□□□□□ -0.33
VEGFA-201ENST00000230480 HCN3Q9P1Z3 774 aa12.98□□□□□ -0.33
VEGFA-201ENST00000230480 CPSF2Q9P2I0 782 aaKnown RBP12.98□□□□□ -0.33
VEGFA-201ENST00000230480 TRPC4Q9UBN4 977 aa12.98□□□□□ -0.33
VEGFA-201ENST00000230480 ZNF282Q9UDV7 671 aaPredicted RBP12.98□□□□□ -0.33
VEGFA-201ENST00000230480 TBK1Q9UHD2 729 aa12.98□□□□□ -0.33
VEGFA-201ENST00000230480 MAN2B2Q9Y2E5 1009 aa12.98□□□□□ -0.33
VEGFA-201ENST00000230480 SHANK1Q9Y566 2161 aa12.97□□□□□ -0.33
VEGFA-201ENST00000230480 LOC102723996A0A087X1L8 192 aa12.97□□□□□ -0.33
VEGFA-201ENST00000230480 ERICH4A6NGS2 130 aa12.97□□□□□ -0.33
VEGFA-201ENST00000230480 A8MT66 165 aa12.97□□□□□ -0.33
VEGFA-201ENST00000230480 IDSB3KWA1 339 aa12.97□□□□□ -0.33
VEGFA-201ENST00000230480 CHST10O43529 356 aa12.97□□□□□ -0.33
VEGFA-201ENST00000230480 DLX3O60479 287 aa12.97□□□□□ -0.33
VEGFA-201ENST00000230480 RPS17P08708 135 aaKnown RBP12.97□□□□□ -0.33
VEGFA-201ENST00000230480 NUDT17P0C025 328 aa12.97□□□□□ -0.33
VEGFA-201ENST00000230480 PYGBP11216 843 aa12.97□□□□□ -0.33
VEGFA-201ENST00000230480 ALOX12P18054 663 aa12.97□□□□□ -0.33
VEGFA-201ENST00000230480 HNF4AP41235 474 aa12.97□□□□□ -0.33
VEGFA-201ENST00000230480 DEFB134Q4QY38 66 aa12.97□□□□□ -0.33
VEGFA-201ENST00000230480 UNC50Q53HI1 259 aa12.97□□□□□ -0.33
VEGFA-201ENST00000230480 XKR6Q5GH73 641 aa12.97□□□□□ -0.33
VEGFA-201ENST00000230480 DCAF10Q5QP82 559 aa12.97□□□□□ -0.33
VEGFA-201ENST00000230480 MED25Q71SY5 747 aa12.97□□□□□ -0.33
VEGFA-201ENST00000230480 GOLGA7Q7Z5G4 137 aa12.97□□□□□ -0.33
VEGFA-201ENST00000230480 SNX31Q8N9S9 440 aa12.97□□□□□ -0.33
VEGFA-201ENST00000230480 FDCSPQ8NFU4 85 aa12.97□□□□□ -0.33
VEGFA-201ENST00000230480 OR52B6Q8NGF0 335 aa12.97□□□□□ -0.33
VEGFA-201ENST00000230480 PSMF1Q92530 271 aa12.97□□□□□ -0.33
VEGFA-201ENST00000230480 CAVIN3Q969G5 261 aa12.97□□□□□ -0.33
VEGFA-201ENST00000230480 PTCD3Q96EY7 689 aaKnown RBP12.97□□□□□ -0.33
VEGFA-201ENST00000230480 WDR77Q9BQA1 342 aaPredicted RBP12.97□□□□□ -0.33
VEGFA-201ENST00000230480 C17orf62Q9BQA9 187 aa12.97□□□□□ -0.33
VEGFA-201ENST00000230480 MRPL57Q9BQC6 102 aaKnown RBP12.97□□□□□ -0.33
VEGFA-201ENST00000230480 NUDT9Q9BW91 350 aa12.97□□□□□ -0.33
VEGFA-201ENST00000230480 C1QTNF3Q9BXJ4 246 aa12.97□□□□□ -0.33
VEGFA-201ENST00000230480 ZNF717Q9BY31 904 aaPredicted RBP12.97□□□□□ -0.33
VEGFA-201ENST00000230480 VN1R1Q9GZP7 353 aa12.97□□□□□ -0.33
VEGFA-201ENST00000230480 ADNPQ9H2P0 1102 aa12.97□□□□□ -0.33
VEGFA-201ENST00000230480 CNOT10Q9H9A5 744 aaKnown RBP12.97□□□□□ -0.33
VEGFA-201ENST00000230480 ZBTB20Q9HC78 741 aaPredicted RBP12.97□□□□□ -0.33
VEGFA-201ENST00000230480 ZNF71Q9NQZ8 489 aaPredicted RBP12.97□□□□□ -0.33
VEGFA-201ENST00000230480 GPN3Q9UHW5 284 aaPredicted RBP12.97□□□□□ -0.33
VEGFA-201ENST00000230480 TUBD1Q9UJT1 453 aa12.97□□□□□ -0.33
VEGFA-201ENST00000230480 PCTPQ9UKL6 214 aa12.97□□□□□ -0.33
VEGFA-201ENST00000230480 CDC14AQ9UNH5 594 aa12.97□□□□□ -0.33
VEGFA-201ENST00000230480 TP53TG5Q9Y2B4 290 aa12.97□□□□□ -0.33
VEGFA-201ENST00000230480 RNF11Q9Y3C5 154 aa12.97□□□□□ -0.33
VEGFA-201ENST00000230480 A0A0G2JN53 185 aa12.96□□□□□ -0.33
VEGFA-201ENST00000230480 FAM227AF5H4B4 570 aa12.96□□□□□ -0.33
VEGFA-201ENST00000230480 G3V2L1 256 aa12.96□□□□□ -0.33
VEGFA-201ENST00000230480 TGFBR3LH3BV60 316 aa12.96□□□□□ -0.33
VEGFA-201ENST00000230480 AGPSO00116 658 aa12.96□□□□□ -0.33
VEGFA-201ENST00000230480 CLEC3AO75596 197 aa12.96□□□□□ -0.33
VEGFA-201ENST00000230480 ETHE1O95571 254 aa12.96□□□□□ -0.33
VEGFA-201ENST00000230480 CELA2AP08217 269 aa12.96□□□□□ -0.33
VEGFA-201ENST00000230480 RBP1P09455 135 aa12.96□□□□□ -0.33
VEGFA-201ENST00000230480 PIM1P11309 404 aaPredicted RBP12.96□□□□□ -0.33
VEGFA-201ENST00000230480 EEF1DP29692 281 aaKnown RBP12.96□□□□□ -0.33
VEGFA-201ENST00000230480 GRK3P35626 688 aa12.96□□□□□ -0.33
VEGFA-201ENST00000230480 CCL11P51671 97 aa12.96□□□□□ -0.33
VEGFA-201ENST00000230480 HNRNPFP52597 415 aaKnown RBP12.96□□□□□ -0.33
VEGFA-201ENST00000230480 RHAGQ02094 409 aa12.96□□□□□ -0.33
VEGFA-201ENST00000230480 SLC18A2Q05940 514 aa12.96□□□□□ -0.33
VEGFA-201ENST00000230480 TRAF3Q13114 568 aa12.96□□□□□ -0.33
VEGFA-201ENST00000230480 TOR1AIP1Q5JTV8 583 aa12.96□□□□□ -0.33
VEGFA-201ENST00000230480 COLEC12Q5KU26 742 aa12.96□□□□□ -0.33
VEGFA-201ENST00000230480 ZNF793Q6ZN11 406 aa12.96□□□□□ -0.33
VEGFA-201ENST00000230480 LANCL3Q6ZV70 420 aa12.96□□□□□ -0.33
VEGFA-201ENST00000230480 L3MBTL4Q8NA19 623 aa12.96□□□□□ -0.33
VEGFA-201ENST00000230480 TMEM52Q8NDY8 209 aa12.96□□□□□ -0.33
VEGFA-201ENST00000230480 TRPV3Q8NET8 790 aa12.96□□□□□ -0.33
VEGFA-201ENST00000230480 OR7G3Q8NG95 312 aa12.96□□□□□ -0.33
VEGFA-201ENST00000230480 WDR20Q8TBZ3 569 aa12.96□□□□□ -0.33
VEGFA-201ENST00000230480 ZNF483Q8TF39 744 aaPredicted RBP12.96□□□□□ -0.33
VEGFA-201ENST00000230480 UBLCP1Q8WVY7 318 aaPredicted RBP12.96□□□□□ -0.33
VEGFA-201ENST00000230480 MIEF2Q96C03 454 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms