RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 LIPAP38571 399 aa19.79■□□□□ 0.76
SNX3-201ENST00000230085 CLK1P49759 484 aaKnown RBP19.79■□□□□ 0.76
SNX3-201ENST00000230085 LSM3P62310 102 aaKnown RBP19.79■□□□□ 0.76
SNX3-201ENST00000230085 OLR1P78380 273 aa19.79■□□□□ 0.76
SNX3-201ENST00000230085 LMAN2Q12907 356 aa19.79■□□□□ 0.76
SNX3-201ENST00000230085 EIF4HQ15056 248 aaKnown RBP19.79■□□□□ 0.76
SNX3-201ENST00000230085 C18orf21Q32NC0 220 aaPredicted RBP19.79■□□□□ 0.76
SNX3-201ENST00000230085 TMEM196Q5HYL7 178 aa19.79■□□□□ 0.76
SNX3-201ENST00000230085 THOC7Q6I9Y2 204 aaKnown RBP19.79■□□□□ 0.76
SNX3-201ENST00000230085 C19orf48Q6RUI8 117 aa19.79■□□□□ 0.76
SNX3-201ENST00000230085 GALNT5Q7Z7M9 940 aa19.79■□□□□ 0.76
SNX3-201ENST00000230085 ZZZ3Q8IYH5 903 aa19.79■□□□□ 0.76
SNX3-201ENST00000230085 ENTHD1Q8IYW4 607 aa19.79■□□□□ 0.76
SNX3-201ENST00000230085 PAF1Q8N7H5 531 aa19.79■□□□□ 0.76
SNX3-201ENST00000230085 LPCAT1Q8NF37 534 aa19.79■□□□□ 0.76
SNX3-201ENST00000230085 PYCR2Q96C36 320 aa19.79■□□□□ 0.76
SNX3-201ENST00000230085 CMTM7Q96FZ5 175 aa19.79■□□□□ 0.76
SNX3-201ENST00000230085 LMLNQ96KR4 655 aa19.79■□□□□ 0.76
SNX3-201ENST00000230085 MAGEB10Q96LZ2 347 aaPredicted RBP19.79■□□□□ 0.76
SNX3-201ENST00000230085 SNX18Q96RF0 628 aa19.79■□□□□ 0.76
SNX3-201ENST00000230085 CCDC32Q9BV29 185 aa19.79■□□□□ 0.76
SNX3-201ENST00000230085 CDADC1Q9BWV3 514 aa19.79■□□□□ 0.76
SNX3-201ENST00000230085 TRAPPC4Q9Y296 219 aa19.79■□□□□ 0.76
SNX3-201ENST00000230085 TMEM98Q9Y2Y6 226 aa19.79■□□□□ 0.76
SNX3-201ENST00000230085 TBC1D3BA6NDS4 549 aa19.78■□□□□ 0.76
SNX3-201ENST00000230085 EVPLLA8MZ36 301 aa19.78■□□□□ 0.76
SNX3-201ENST00000230085 STK25O00506 426 aa19.78■□□□□ 0.76
SNX3-201ENST00000230085 KAT7O95251 611 aa19.78■□□□□ 0.76
SNX3-201ENST00000230085 PDGFBP01127 241 aaPredicted RBP19.78■□□□□ 0.76
SNX3-201ENST00000230085 RPLP0P05388 317 aaKnown RBP19.78■□□□□ 0.76
SNX3-201ENST00000230085 LCKP06239 509 aa19.78■□□□□ 0.76
SNX3-201ENST00000230085 PTX3P26022 381 aaPredicted RBP19.78■□□□□ 0.76
SNX3-201ENST00000230085 KDELR2P33947 212 aa19.78■□□□□ 0.76
SNX3-201ENST00000230085 RPP38P78345 283 aaKnown RBP19.78■□□□□ 0.76
SNX3-201ENST00000230085 PPP1R8Q12972 351 aaKnown RBP19.78■□□□□ 0.76
SNX3-201ENST00000230085 DGCR6Q14129 220 aa19.78■□□□□ 0.76
SNX3-201ENST00000230085 TPRG1LQ5T0D9 272 aa19.78■□□□□ 0.76
SNX3-201ENST00000230085 CCDC81Q6ZN84 652 aa19.78■□□□□ 0.76
SNX3-201ENST00000230085 ZNF551Q7Z340 670 aaPredicted RBP19.78■□□□□ 0.76
SNX3-201ENST00000230085 RBFAQ8N0V3 343 aa19.78■□□□□ 0.76
SNX3-201ENST00000230085 C17orf50Q8WW18 174 aa19.78■□□□□ 0.76
SNX3-201ENST00000230085 FOXQ1Q9C009 403 aa19.78■□□□□ 0.76
SNX3-201ENST00000230085 OR2B2Q9GZK3 357 aa19.78■□□□□ 0.76
SNX3-201ENST00000230085 PDP1Q9P0J1 537 aaPredicted RBP19.78■□□□□ 0.76
SNX3-201ENST00000230085 SLC27A6Q9Y2P4 619 aa19.78■□□□□ 0.76
SNX3-201ENST00000230085 ANGPTL3Q9Y5C1 460 aa19.78■□□□□ 0.76
SNX3-201ENST00000230085 FAM172BPA6NC97 362 aa19.78■□□□□ 0.76
SNX3-201ENST00000230085 CENPBD1B2RD01 187 aa19.78■□□□□ 0.76
SNX3-201ENST00000230085 PRRT4C9JH25 899 aa19.78■□□□□ 0.76
SNX3-201ENST00000230085 LOC110117498-PIK3R3F6TDL0 507 aa19.78■□□□□ 0.76
SNX3-201ENST00000230085 TNFRSF10AO00220 468 aa19.78■□□□□ 0.76
SNX3-201ENST00000230085 MAN1A2O60476 641 aa19.78■□□□□ 0.76
SNX3-201ENST00000230085 CLDN9O95484 217 aa19.78■□□□□ 0.76
SNX3-201ENST00000230085 EGFP01133 1207 aa19.78■□□□□ 0.76
SNX3-201ENST00000230085 CDK1P06493 297 aa19.78■□□□□ 0.76
SNX3-201ENST00000230085 CBSLP0DN79 551 aa19.78■□□□□ 0.76
SNX3-201ENST00000230085 MZF1P28698 734 aaPredicted RBP19.78■□□□□ 0.76
SNX3-201ENST00000230085 CBSP35520 551 aa19.78■□□□□ 0.76
SNX3-201ENST00000230085 ARL1P40616 181 aaPredicted RBP19.78■□□□□ 0.76
SNX3-201ENST00000230085 DEFA1P59665 94 aa19.78■□□□□ 0.76
SNX3-201ENST00000230085 DEFA3P59666 94 aa19.78■□□□□ 0.76
SNX3-201ENST00000230085 PLIN5Q00G26 463 aa19.78■□□□□ 0.76
SNX3-201ENST00000230085 HMGCS1Q01581 520 aa19.78■□□□□ 0.76
SNX3-201ENST00000230085 CAMK2GQ13555 558 aaPredicted RBP19.78■□□□□ 0.76
SNX3-201ENST00000230085 IRF3Q14653 427 aa19.78■□□□□ 0.76
SNX3-201ENST00000230085 TMEM215Q68D42 235 aa19.78■□□□□ 0.76
SNX3-201ENST00000230085 DNAJC14Q6Y2X3 702 aaPredicted RBP19.78■□□□□ 0.76
SNX3-201ENST00000230085 MACC1Q6ZN28 852 aa19.78■□□□□ 0.76
SNX3-201ENST00000230085 HORMAD1Q86X24 394 aa19.78■□□□□ 0.76
SNX3-201ENST00000230085 DNAJC22Q8N4W6 341 aa19.78■□□□□ 0.76
SNX3-201ENST00000230085 POC5Q8NA72 575 aa19.78■□□□□ 0.76
SNX3-201ENST00000230085 SETD6Q8TBK2 473 aa19.78■□□□□ 0.76
SNX3-201ENST00000230085 PIK3R3Q92569 461 aa19.78■□□□□ 0.76
SNX3-201ENST00000230085 NELL1Q92832 810 aa19.78■□□□□ 0.76
SNX3-201ENST00000230085 CRELD1Q96HD1 420 aa19.78■□□□□ 0.76
SNX3-201ENST00000230085 ACPTQ9BZG2 426 aa19.78■□□□□ 0.76
SNX3-201ENST00000230085 CLPBQ9H078 707 aa19.78■□□□□ 0.76
SNX3-201ENST00000230085 REEP1Q9H902 201 aa19.78■□□□□ 0.76
SNX3-201ENST00000230085 TBC1D17Q9HA65 648 aa19.78■□□□□ 0.76
SNX3-201ENST00000230085 ABCB10Q9NRK6 738 aa19.78■□□□□ 0.76
SNX3-201ENST00000230085 PCDHGA6Q9Y5G7 932 aa19.78■□□□□ 0.76
SNX3-201ENST00000230085 DSCR3O14972 297 aa19.77■□□□□ 0.76
SNX3-201ENST00000230085 KCNK5O95279 499 aa19.77■□□□□ 0.76
SNX3-201ENST00000230085 MED26O95402 600 aa19.77■□□□□ 0.76
SNX3-201ENST00000230085 APODP05090 189 aa19.77■□□□□ 0.76
SNX3-201ENST00000230085 ABCB1P08183 1280 aaPredicted RBP19.77■□□□□ 0.76
SNX3-201ENST00000230085 GGT2P36268 569 aa19.77■□□□□ 0.76
SNX3-201ENST00000230085 CSKP41240 450 aa19.77■□□□□ 0.76
SNX3-201ENST00000230085 SLC13A2Q13183 592 aa19.77■□□□□ 0.76
SNX3-201ENST00000230085 UBXN2BQ14CS0 331 aa19.77■□□□□ 0.76
SNX3-201ENST00000230085 INO80DQ53TQ3 878 aaPredicted RBP19.77■□□□□ 0.76
SNX3-201ENST00000230085 GPRC6AQ5T6X5 926 aa19.77■□□□□ 0.76
SNX3-201ENST00000230085 AGAP6Q5VW22 663 aa19.77■□□□□ 0.76
SNX3-201ENST00000230085 NEK5Q6P3R8 708 aa19.77■□□□□ 0.76
SNX3-201ENST00000230085 NCEH1Q6PIU2 408 aa19.77■□□□□ 0.76
SNX3-201ENST00000230085 ZNF783Q6ZMS7 281 aa19.77■□□□□ 0.76
SNX3-201ENST00000230085 APCDD1Q8J025 514 aa19.77■□□□□ 0.76
SNX3-201ENST00000230085 OR7D4Q8NG98 312 aa19.77■□□□□ 0.76
SNX3-201ENST00000230085 AGAP4Q96P64 663 aa19.77■□□□□ 0.76
SNX3-201ENST00000230085 COPS4Q9BT78 406 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms