RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 PFKLP17858 780 aa12.82□□□□□ -0.36
COL1A1-201ENST00000225964 GRIK2Q13002 908 aa12.82□□□□□ -0.36
COL1A1-201ENST00000225964 LRIF1Q5T3J3 769 aa12.82□□□□□ -0.36
COL1A1-201ENST00000225964 NLGN4XQ8N0W4 816 aa12.82□□□□□ -0.36
COL1A1-201ENST00000225964 GNPDA2Q8TDQ7 276 aa12.82□□□□□ -0.36
COL1A1-201ENST00000225964 SAMD11Q96NU1 681 aa12.82□□□□□ -0.36
COL1A1-201ENST00000225964 C17orf62Q9BQA9 187 aa12.82□□□□□ -0.36
COL1A1-201ENST00000225964 SFXN1Q9H9B4 322 aa12.82□□□□□ -0.36
COL1A1-201ENST00000225964 XPNPEP1Q9NQW7 623 aa12.82□□□□□ -0.36
COL1A1-201ENST00000225964 PADI2Q9Y2J8 665 aa12.82□□□□□ -0.36
COL1A1-201ENST00000225964 ALG5Q9Y673 324 aa12.82□□□□□ -0.36
COL1A1-201ENST00000225964 MTMR11A4FU01 709 aa12.82□□□□□ -0.36
COL1A1-201ENST00000225964 DNM1LO00429 736 aa12.82□□□□□ -0.36
COL1A1-201ENST00000225964 DUX1O43812 170 aa12.82□□□□□ -0.36
COL1A1-201ENST00000225964 RNGTTO60942 597 aaKnown RBP12.82□□□□□ -0.36
COL1A1-201ENST00000225964 SHMT2P34897 504 aa12.82□□□□□ -0.36
COL1A1-201ENST00000225964 ST3GAL4Q11206 333 aa12.82□□□□□ -0.36
COL1A1-201ENST00000225964 PON3Q15166 354 aa12.82□□□□□ -0.36
COL1A1-201ENST00000225964 NIPA2Q8N8Q9 360 aa12.82□□□□□ -0.36
COL1A1-201ENST00000225964 HSPBAP1Q96EW2 488 aa12.82□□□□□ -0.36
COL1A1-201ENST00000225964 XKR8Q9H6D3 395 aa12.82□□□□□ -0.36
COL1A1-201ENST00000225964 SSU72Q9NP77 194 aaKnown RBP12.82□□□□□ -0.36
COL1A1-201ENST00000225964 ZNF358Q9NW07 568 aa12.82□□□□□ -0.36
COL1A1-201ENST00000225964 PPP4R1LQ9P1A2 415 aa12.82□□□□□ -0.36
COL1A1-201ENST00000225964 B4GALT7Q9UBV7 327 aa12.82□□□□□ -0.36
COL1A1-201ENST00000225964 A8MT66 165 aa12.81□□□□□ -0.36
COL1A1-201ENST00000225964 H3BNX3 289 aa12.81□□□□□ -0.36
COL1A1-201ENST00000225964 SLC6A6P31641 620 aa12.81□□□□□ -0.36
COL1A1-201ENST00000225964 OGDHQ02218 1023 aa12.81□□□□□ -0.36
COL1A1-201ENST00000225964 TMEM115Q12893 351 aaPredicted RBP12.81□□□□□ -0.36
COL1A1-201ENST00000225964 SNX29P2Q8IUI4 249 aa12.81□□□□□ -0.36
COL1A1-201ENST00000225964 ZNF100Q8IYN0 542 aa12.81□□□□□ -0.36
COL1A1-201ENST00000225964 BANPQ8N9N5 519 aa12.81□□□□□ -0.36
COL1A1-201ENST00000225964 TUBGCP5Q96RT8 1024 aa12.81□□□□□ -0.36
COL1A1-201ENST00000225964 OR51I1Q9H343 314 aa12.81□□□□□ -0.36
COL1A1-201ENST00000225964 ZNF226Q9NYT6 803 aa12.81□□□□□ -0.36
COL1A1-201ENST00000225964 TMED5Q9Y3A6 229 aa12.81□□□□□ -0.36
COL1A1-201ENST00000225964 SQORQ9Y6N5 450 aa12.81□□□□□ -0.36
COL1A1-201ENST00000225964 TP53I11O14683 189 aa12.81□□□□□ -0.36
COL1A1-201ENST00000225964 SOX14O95416 240 aa12.81□□□□□ -0.36
COL1A1-201ENST00000225964 UNGP13051 313 aaPredicted RBP12.81□□□□□ -0.36
COL1A1-201ENST00000225964 TSTQ16762 297 aaKnown RBP12.81□□□□□ -0.36
COL1A1-201ENST00000225964 GPRC6AQ5T6X5 926 aa12.81□□□□□ -0.36
COL1A1-201ENST00000225964 KCTD9Q7L273 389 aa12.81□□□□□ -0.36
COL1A1-201ENST00000225964 RNF130Q86XS8 419 aa12.81□□□□□ -0.36
COL1A1-201ENST00000225964 TOMM5Q8N4H5 51 aa12.81□□□□□ -0.36
COL1A1-201ENST00000225964 TMEM41AQ96HV5 264 aa12.81□□□□□ -0.36
COL1A1-201ENST00000225964 ACOX3O15254 700 aa12.81□□□□□ -0.36
COL1A1-201ENST00000225964 PEX14O75381 377 aa12.81□□□□□ -0.36
COL1A1-201ENST00000225964 LHCGRP22888 699 aa12.81□□□□□ -0.36
COL1A1-201ENST00000225964 EIF5AP63241 154 aaKnown RBP12.81□□□□□ -0.36
COL1A1-201ENST00000225964 NKAPLQ5M9Q1 402 aa12.81□□□□□ -0.36
COL1A1-201ENST00000225964 TMED4Q7Z7H5 227 aa12.81□□□□□ -0.36
COL1A1-201ENST00000225964 OSTM1Q86WC4 334 aa12.81□□□□□ -0.36
COL1A1-201ENST00000225964 AKAP1Q92667 903 aaKnown RBP eCLIP12.81□□□□□ -0.36
COL1A1-201ENST00000225964 BADQ92934 168 aa12.81□□□□□ -0.36
COL1A1-201ENST00000225964 POLDIP3Q9BY77 421 aaKnown RBP12.81□□□□□ -0.36
COL1A1-201ENST00000225964 AMBNQ9NP70 447 aa12.81□□□□□ -0.36
COL1A1-201ENST00000225964 OXSMQ9NWU1 459 aa12.81□□□□□ -0.36
COL1A1-201ENST00000225964 WRAP73Q9P2S5 460 aaPredicted RBP12.81□□□□□ -0.36
COL1A1-201ENST00000225964 RHOP08100 348 aa12.81□□□□□ -0.36
COL1A1-201ENST00000225964 C1orf61Q13536 156 aa12.81□□□□□ -0.36
COL1A1-201ENST00000225964 LASP1Q14847 261 aaKnown RBP12.81□□□□□ -0.36
COL1A1-201ENST00000225964 SYT16Q17RD7 645 aa12.81□□□□□ -0.36
COL1A1-201ENST00000225964 RNF220Q5VTB9 566 aa12.81□□□□□ -0.36
COL1A1-201ENST00000225964 RAET1LQ5VY80 246 aa12.81□□□□□ -0.36
COL1A1-201ENST00000225964 TTLL10Q6ZVT0 673 aa12.81□□□□□ -0.36
COL1A1-201ENST00000225964 NKX2-4Q9H2Z4 354 aa12.81□□□□□ -0.36
COL1A1-201ENST00000225964 TIGARQ9NQ88 270 aa12.81□□□□□ -0.36
COL1A1-201ENST00000225964 CLDN25C9JDP6 229 aa12.81□□□□□ -0.36
COL1A1-201ENST00000225964 SLC6A4P31645 630 aa12.81□□□□□ -0.36
COL1A1-201ENST00000225964 UFM1P61960 85 aa12.81□□□□□ -0.36
COL1A1-201ENST00000225964 AGTRAPQ6RW13 159 aa12.81□□□□□ -0.36
COL1A1-201ENST00000225964 RBP7Q96R05 134 aa12.81□□□□□ -0.36
COL1A1-201ENST00000225964 SLC29A3Q9BZD2 475 aa12.81□□□□□ -0.36
COL1A1-201ENST00000225964 PCDHB16Q9NRJ7 776 aa12.81□□□□□ -0.36
COL1A1-201ENST00000225964 TAS2R9Q9NYW1 312 aa12.81□□□□□ -0.36
COL1A1-201ENST00000225964 RHCGQ9UBD6 479 aa12.81□□□□□ -0.36
COL1A1-201ENST00000225964 LEFTY1O75610 366 aa12.81□□□□□ -0.36
COL1A1-201ENST00000225964 IFI30P13284 250 aa12.81□□□□□ -0.36
COL1A1-201ENST00000225964 OTX2P32243 289 aa12.81□□□□□ -0.36
COL1A1-201ENST00000225964 GABRA3P34903 492 aa12.81□□□□□ -0.36
COL1A1-201ENST00000225964 GRIA1P42261 906 aa12.81□□□□□ -0.36
COL1A1-201ENST00000225964 FAM69BQ5VUD6 431 aa12.81□□□□□ -0.36
COL1A1-201ENST00000225964 LAS2Q8IYD9 372 aa12.81□□□□□ -0.36
COL1A1-201ENST00000225964 OR8S1Q8NH09 359 aa12.81□□□□□ -0.36
COL1A1-201ENST00000225964 KCNJ9Q92806 393 aa12.81□□□□□ -0.36
COL1A1-201ENST00000225964 RADILQ96JH8 1075 aa12.81□□□□□ -0.36
COL1A1-201ENST00000225964 OR2M4Q96R27 311 aa12.81□□□□□ -0.36
COL1A1-201ENST00000225964 EBF4Q9BQW3 602 aa12.81□□□□□ -0.36
COL1A1-201ENST00000225964 GABRQQ9UN88 632 aa12.81□□□□□ -0.36
COL1A1-201ENST00000225964 BACE2Q9Y5Z0 518 aa12.81□□□□□ -0.36
COL1A1-201ENST00000225964 UBR1Q8IWV7 1749 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 MROH1Q8NDA8 1641 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 EI24O14681 340 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 MRPL3P09001 348 aaKnown RBP12.8□□□□□ -0.36
COL1A1-201ENST00000225964 VAMP1P23763 118 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 UQCRC1P31930 480 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 PBX1P40424 430 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 ADAM17P78536 824 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms