RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 SLC6A16Q9GZN6 736 aa12.01□□□□□ -0.49
LSM5-201ENST00000223084 ING2Q9H160 280 aa12.01□□□□□ -0.49
LSM5-201ENST00000223084 MRPL46Q9H2W6 279 aaKnown RBP12.01□□□□□ -0.49
LSM5-201ENST00000223084 NT5DC2Q9H857 520 aa12.01□□□□□ -0.49
LSM5-201ENST00000223084 MKKSQ9NPJ1 570 aaPredicted RBP12.01□□□□□ -0.49
LSM5-201ENST00000223084 ACSS2Q9NR19 701 aa12.01□□□□□ -0.49
LSM5-201ENST00000223084 C3orf18Q9UK00 162 aa12.01□□□□□ -0.49
LSM5-201ENST00000223084 ANGPTL3Q9Y5C1 460 aa12.01□□□□□ -0.49
LSM5-201ENST00000223084 HS3ST3B1Q9Y662 390 aa12.01□□□□□ -0.49
LSM5-201ENST00000223084 SLC22A7Q9Y694 548 aa12.01□□□□□ -0.49
LSM5-201ENST00000223084 TLN1Q9Y490 2541 aaKnown RBP12.01□□□□□ -0.49
LSM5-201ENST00000223084 SPTA1P02549 2419 aa12□□□□□ -0.49
LSM5-201ENST00000223084 A0A0G2JN53 185 aa12□□□□□ -0.49
LSM5-201ENST00000223084 TLDC2A0PJX2 215 aa12□□□□□ -0.49
LSM5-201ENST00000223084 OR2W5A6NFC9 320 aa12□□□□□ -0.49
LSM5-201ENST00000223084 A6NL46 340 aa12□□□□□ -0.49
LSM5-201ENST00000223084 K7EM74 188 aa12□□□□□ -0.49
LSM5-201ENST00000223084 PEX12O00623 359 aa12□□□□□ -0.49
LSM5-201ENST00000223084 E2F3O00716 465 aa12□□□□□ -0.49
LSM5-201ENST00000223084 GALR3O60755 368 aaPredicted RBP12□□□□□ -0.49
LSM5-201ENST00000223084 SMIM24O75264 130 aa12□□□□□ -0.49
LSM5-201ENST00000223084 WFS1O76024 890 aa12□□□□□ -0.49
LSM5-201ENST00000223084 BMP10O95393 424 aa12□□□□□ -0.49
LSM5-201ENST00000223084 TBX6O95947 436 aaPredicted RBP12□□□□□ -0.49
LSM5-201ENST00000223084 SERPINA6P08185 405 aa12□□□□□ -0.49
LSM5-201ENST00000223084 HNRNPH1P31943 449 aaKnown RBP12□□□□□ -0.49
LSM5-201ENST00000223084 CASP2P42575 452 aa12□□□□□ -0.49
LSM5-201ENST00000223084 EFNA3P52797 238 aa12□□□□□ -0.49
LSM5-201ENST00000223084 EMP2P54851 167 aa12□□□□□ -0.49
LSM5-201ENST00000223084 GTF2H2Q13888 395 aa12□□□□□ -0.49
LSM5-201ENST00000223084 HERC3Q15034 1050 aa12□□□□□ -0.49
LSM5-201ENST00000223084 TBCCQ15814 346 aa12□□□□□ -0.49
LSM5-201ENST00000223084 RBBP7Q16576 425 aa12□□□□□ -0.49
LSM5-201ENST00000223084 GTF2H2CQ6P1K8 395 aa12□□□□□ -0.49
LSM5-201ENST00000223084 KIRREL2Q6UWL6 708 aa12□□□□□ -0.49
LSM5-201ENST00000223084 RPS27LQ71UM5 84 aaKnown RBP12□□□□□ -0.49
LSM5-201ENST00000223084 ABHD13Q7L211 337 aa12□□□□□ -0.49
LSM5-201ENST00000223084 APLFQ8IW19 511 aaPredicted RBP12□□□□□ -0.49
LSM5-201ENST00000223084 OR51Q1Q8NH59 317 aa12□□□□□ -0.49
LSM5-201ENST00000223084 C8orf44Q96CB5 159 aa12□□□□□ -0.49
LSM5-201ENST00000223084 ABHD17AQ96GS6 310 aa12□□□□□ -0.49
LSM5-201ENST00000223084 NSUN5Q96P11 429 aaKnown RBP12□□□□□ -0.49
LSM5-201ENST00000223084 EFCAB11Q9BUY7 163 aa12□□□□□ -0.49
LSM5-201ENST00000223084 RBCK1Q9BYM8 510 aa12□□□□□ -0.49
LSM5-201ENST00000223084 ADNPQ9H2P0 1102 aa12□□□□□ -0.49
LSM5-201ENST00000223084 PRM3Q9NNZ6 103 aa12□□□□□ -0.49
LSM5-201ENST00000223084 ZNF71Q9NQZ8 489 aaPredicted RBP12□□□□□ -0.49
LSM5-201ENST00000223084 SEMA3GQ9NS98 782 aa12□□□□□ -0.49
LSM5-201ENST00000223084 C14orf105Q9NVL8 296 aa12□□□□□ -0.49
LSM5-201ENST00000223084 COPG2Q9UBF2 871 aa12□□□□□ -0.49
LSM5-201ENST00000223084 FBXL4Q9UKA2 621 aa12□□□□□ -0.49
LSM5-201ENST00000223084 DOCK10Q96BY6 2186 aa12□□□□□ -0.49
LSM5-201ENST00000223084 ANKDD1BA6NHY2 528 aa11.99□□□□□ -0.49
LSM5-201ENST00000223084 IDSB3KWA1 339 aa11.99□□□□□ -0.49
LSM5-201ENST00000223084 SH3BGRLO75368 114 aa11.99□□□□□ -0.49
LSM5-201ENST00000223084 HEXBP07686 556 aa11.99□□□□□ -0.49
LSM5-201ENST00000223084 SMIM10L1P0DMW3 83 aa11.99□□□□□ -0.49
LSM5-201ENST00000223084 PCNAP12004 261 aa11.99□□□□□ -0.49
LSM5-201ENST00000223084 KRT15P19012 456 aa11.99□□□□□ -0.49
LSM5-201ENST00000223084 XCR1P46094 333 aa11.99□□□□□ -0.49
LSM5-201ENST00000223084 BTN3A2P78410 334 aa11.99□□□□□ -0.49
LSM5-201ENST00000223084 NFATC3Q12968 1075 aa11.99□□□□□ -0.49
LSM5-201ENST00000223084 LAPTM5Q13571 262 aa11.99□□□□□ -0.49
LSM5-201ENST00000223084 RAPSNQ13702 412 aa11.99□□□□□ -0.49
LSM5-201ENST00000223084 E2F2Q14209 437 aa11.99□□□□□ -0.49
LSM5-201ENST00000223084 HIST2H2ACQ16777 129 aaPredicted RBP11.99□□□□□ -0.49
LSM5-201ENST00000223084 PAGE2BQ5JRK9 111 aa11.99□□□□□ -0.49
LSM5-201ENST00000223084 DCAF10Q5QP82 559 aa11.99□□□□□ -0.49
LSM5-201ENST00000223084 MFSD4BQ5TF39 518 aa11.99□□□□□ -0.49
LSM5-201ENST00000223084 HIST2H2AA3Q6FI13 130 aa11.99□□□□□ -0.49
LSM5-201ENST00000223084 EMBQ6PCB8 327 aa11.99□□□□□ -0.49
LSM5-201ENST00000223084 MED25Q71SY5 747 aa11.99□□□□□ -0.49
LSM5-201ENST00000223084 TDRPQ86YL5 185 aa11.99□□□□□ -0.49
LSM5-201ENST00000223084 MYLK4Q86YV6 388 aaPredicted RBP11.99□□□□□ -0.49
LSM5-201ENST00000223084 ZNF843Q8N446 348 aa11.99□□□□□ -0.49
LSM5-201ENST00000223084 RNF175Q8N4F7 328 aa11.99□□□□□ -0.49
LSM5-201ENST00000223084 AMER2Q8N7J2 671 aa11.99□□□□□ -0.49
LSM5-201ENST00000223084 TMEM102Q8N9M5 508 aaPredicted RBP11.99□□□□□ -0.49
LSM5-201ENST00000223084 TTLQ8NG68 377 aa11.99□□□□□ -0.49
LSM5-201ENST00000223084 ACMSDQ8TDX5 336 aa11.99□□□□□ -0.49
LSM5-201ENST00000223084 CAVIN3Q969G5 261 aa11.99□□□□□ -0.49
LSM5-201ENST00000223084 PEX11GQ96HA9 241 aa11.99□□□□□ -0.49
LSM5-201ENST00000223084 SMIM10Q96HG1 83 aa11.99□□□□□ -0.49
LSM5-201ENST00000223084 TGIF2Q9GZN2 237 aa11.99□□□□□ -0.49
LSM5-201ENST00000223084 PITHD1Q9GZP4 211 aaPredicted RBP11.99□□□□□ -0.49
LSM5-201ENST00000223084 SLC25A18Q9H1K4 315 aa11.99□□□□□ -0.49
LSM5-201ENST00000223084 IPPKQ9H8X2 491 aa11.99□□□□□ -0.49
LSM5-201ENST00000223084 PCTPQ9UKL6 214 aa11.99□□□□□ -0.49
LSM5-201ENST00000223084 MKL2Q9ULH7 1088 aa11.99□□□□□ -0.49
LSM5-201ENST00000223084 TNPO3Q9Y5L0 923 aaKnown RBP11.99□□□□□ -0.49
LSM5-201ENST00000223084 NUP210LQ5VU65 1888 aa11.98□□□□□ -0.49
LSM5-201ENST00000223084 LRIT2A6NDA9 550 aa11.98□□□□□ -0.49
LSM5-201ENST00000223084 URADA6NGE7 173 aa11.98□□□□□ -0.49
LSM5-201ENST00000223084 A8MT66 165 aa11.98□□□□□ -0.49
LSM5-201ENST00000223084 MKRN2OSH3BPM6 223 aa11.98□□□□□ -0.49
LSM5-201ENST00000223084 STX16-NPEPL1H3BU86 382 aa11.98□□□□□ -0.49
LSM5-201ENST00000223084 AGPSO00116 658 aa11.98□□□□□ -0.49
LSM5-201ENST00000223084 OR7A17O14581 309 aa11.98□□□□□ -0.49
LSM5-201ENST00000223084 STX16O14662 325 aa11.98□□□□□ -0.49
LSM5-201ENST00000223084 ERI3O43414 337 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms