RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 TOR1AIP1Q5JTV8 583 aa13.15□□□□□ -0.3
GABPB1-201ENST00000220429 PRSS36Q5K4E3 855 aa13.15□□□□□ -0.3
GABPB1-201ENST00000220429 RNF135Q8IUD6 432 aa13.15□□□□□ -0.3
GABPB1-201ENST00000220429 OR5T2Q8NGG2 359 aa13.15□□□□□ -0.3
GABPB1-201ENST00000220429 HEXDCQ8WVB3 486 aa13.15□□□□□ -0.3
GABPB1-201ENST00000220429 USP7Q93009 1102 aa13.15□□□□□ -0.3
GABPB1-201ENST00000220429 NSMCE2Q96MF7 247 aa13.15□□□□□ -0.3
GABPB1-201ENST00000220429 MNTQ99583 582 aa13.15□□□□□ -0.3
GABPB1-201ENST00000220429 DPCDQ9BVM2 203 aaPredicted RBP13.15□□□□□ -0.3
GABPB1-201ENST00000220429 CINPQ9BW66 212 aaPredicted RBP13.15□□□□□ -0.3
GABPB1-201ENST00000220429 C1QTNF6Q9BXI9 259 aa13.15□□□□□ -0.3
GABPB1-201ENST00000220429 SRRQ9GZT4 340 aa13.15□□□□□ -0.3
GABPB1-201ENST00000220429 GSN-AS1Q9NRJ2 163 aa13.15□□□□□ -0.3
GABPB1-201ENST00000220429 ABCB8Q9NUT2 735 aa13.15□□□□□ -0.3
GABPB1-201ENST00000220429 ACTR10Q9NZ32 417 aa13.15□□□□□ -0.3
GABPB1-201ENST00000220429 FBXO10Q9UK96 956 aa13.15□□□□□ -0.3
GABPB1-201ENST00000220429 INVSQ9Y283 1065 aa13.15□□□□□ -0.3
GABPB1-201ENST00000220429 SESN1Q9Y6P5 492 aa13.15□□□□□ -0.3
GABPB1-201ENST00000220429 CCL22O00626 93 aa13.14□□□□□ -0.31
GABPB1-201ENST00000220429 NPHS1O60500 1241 aa13.14□□□□□ -0.31
GABPB1-201ENST00000220429 TLR5O60602 858 aa13.14□□□□□ -0.31
GABPB1-201ENST00000220429 ATXN1LP0C7T5 689 aaKnown RBP13.14□□□□□ -0.31
GABPB1-201ENST00000220429 ATP4BP51164 291 aa13.14□□□□□ -0.31
GABPB1-201ENST00000220429 KPNA2P52292 529 aaKnown RBP13.14□□□□□ -0.31
GABPB1-201ENST00000220429 FOXM1Q08050 763 aa13.14□□□□□ -0.31
GABPB1-201ENST00000220429 IL10RBQ08334 325 aa13.14□□□□□ -0.31
GABPB1-201ENST00000220429 UGT3A2Q3SY77 523 aa13.14□□□□□ -0.31
GABPB1-201ENST00000220429 SIRPB2Q5JXA9 342 aa13.14□□□□□ -0.31
GABPB1-201ENST00000220429 C5orf46Q6UWT4 87 aa13.14□□□□□ -0.31
GABPB1-201ENST00000220429 TAS1R1Q7RTX1 841 aa13.14□□□□□ -0.31
GABPB1-201ENST00000220429 PROSER1Q86XN7 944 aa13.14□□□□□ -0.31
GABPB1-201ENST00000220429 CYP4Z2PQ8N1L4 340 aa13.14□□□□□ -0.31
GABPB1-201ENST00000220429 UBE2J2Q8N2K1 259 aa13.14□□□□□ -0.31
GABPB1-201ENST00000220429 CLHC1Q8NHS4 586 aa13.14□□□□□ -0.31
GABPB1-201ENST00000220429 DNAJB14Q8TBM8 379 aa13.14□□□□□ -0.31
GABPB1-201ENST00000220429 PXYLP1Q8TE99 480 aa13.14□□□□□ -0.31
GABPB1-201ENST00000220429 FCGR1BQ92637 280 aa13.14□□□□□ -0.31
GABPB1-201ENST00000220429 ARL5BQ96KC2 179 aa13.14□□□□□ -0.31
GABPB1-201ENST00000220429 GPR63Q9BZJ6 419 aa13.14□□□□□ -0.31
GABPB1-201ENST00000220429 C3orf14Q9HBI5 128 aa13.14□□□□□ -0.31
GABPB1-201ENST00000220429 MGAT4AQ9UM21 535 aa13.14□□□□□ -0.31
GABPB1-201ENST00000220429 KRBOX1C9JBD0 128 aa13.14□□□□□ -0.31
GABPB1-201ENST00000220429 FABP7O15540 132 aa13.14□□□□□ -0.31
GABPB1-201ENST00000220429 HNRNPLP14866 589 aaKnown RBP eCLIP13.14□□□□□ -0.312e-7■■■■□ 24.6
GABPB1-201ENST00000220429 JUPP14923 745 aa13.14□□□□□ -0.31
GABPB1-201ENST00000220429 CAPN3P20807 821 aa13.14□□□□□ -0.31
GABPB1-201ENST00000220429 HRH2P25021 359 aa13.14□□□□□ -0.31
GABPB1-201ENST00000220429 OR1E1P30953 314 aa13.14□□□□□ -0.31
GABPB1-201ENST00000220429 RAB13P51153 203 aa13.14□□□□□ -0.31
GABPB1-201ENST00000220429 ARSDP51689 593 aa13.14□□□□□ -0.31
GABPB1-201ENST00000220429 KCNQ1P51787 676 aa13.14□□□□□ -0.31
GABPB1-201ENST00000220429 RING1Q06587 406 aa13.14□□□□□ -0.31
GABPB1-201ENST00000220429 RPA4Q13156 261 aa13.14□□□□□ -0.31
GABPB1-201ENST00000220429 TIGD6Q17RP2 521 aa13.14□□□□□ -0.31
GABPB1-201ENST00000220429 C17orf107Q6ZR85 190 aa13.14□□□□□ -0.31
GABPB1-201ENST00000220429 BEND4Q6ZU67 534 aa13.14□□□□□ -0.31
GABPB1-201ENST00000220429 SLC46A3Q7Z3Q1 461 aa13.14□□□□□ -0.31
GABPB1-201ENST00000220429 GANCQ8TET4 914 aa13.14□□□□□ -0.31
GABPB1-201ENST00000220429 WBP1Q96G27 269 aa13.14□□□□□ -0.31
GABPB1-201ENST00000220429 TRIM54Q9BYV2 358 aa13.14□□□□□ -0.31
GABPB1-201ENST00000220429 OR51E2Q9H255 320 aa13.14□□□□□ -0.31
GABPB1-201ENST00000220429 CLEC4MQ9H2X3 399 aaPredicted RBP13.14□□□□□ -0.31
GABPB1-201ENST00000220429 C8orf33Q9H7E9 229 aaPredicted RBP13.14□□□□□ -0.31
GABPB1-201ENST00000220429 TRPM5Q9NZQ8 1165 aa13.14□□□□□ -0.31
GABPB1-201ENST00000220429 CTSFQ9UBX1 484 aa13.14□□□□□ -0.31
GABPB1-201ENST00000220429 ING4Q9UNL4 249 aa13.14□□□□□ -0.31
GABPB1-201ENST00000220429 A0A075B6Q4 140 aa13.13□□□□□ -0.31
GABPB1-201ENST00000220429 A0A087X1B8 175 aa13.13□□□□□ -0.31
GABPB1-201ENST00000220429 WDR47O94967 919 aa13.13□□□□□ -0.31
GABPB1-201ENST00000220429 APOL3O95236 402 aa13.13□□□□□ -0.31
GABPB1-201ENST00000220429 GALTP07902 379 aa13.13□□□□□ -0.31
GABPB1-201ENST00000220429 LARS2Q15031 903 aaKnown RBP13.13□□□□□ -0.31
GABPB1-201ENST00000220429 FAM98BQ52LJ0 330 aaKnown RBP13.13□□□□□ -0.31
GABPB1-201ENST00000220429 KLHL17Q6TDP4 642 aa13.13□□□□□ -0.31
GABPB1-201ENST00000220429 SPESP1Q6UW49 350 aa13.13□□□□□ -0.31
GABPB1-201ENST00000220429 PRSS55Q6UWB4 352 aaPredicted RBP13.13□□□□□ -0.31
GABPB1-201ENST00000220429 TMPRSS11AQ6ZMR5 421 aa13.13□□□□□ -0.31
GABPB1-201ENST00000220429 OVCH2Q7RTZ1 564 aa13.13□□□□□ -0.31
GABPB1-201ENST00000220429 SVOPLQ8N434 492 aa13.13□□□□□ -0.31
GABPB1-201ENST00000220429 MRPL57Q9BQC6 102 aaKnown RBP13.13□□□□□ -0.31
GABPB1-201ENST00000220429 SORBS1Q9BX66 1292 aaKnown RBP13.13□□□□□ -0.31
GABPB1-201ENST00000220429 SMURF1Q9HCE7 757 aa13.13□□□□□ -0.31
GABPB1-201ENST00000220429 SDHAF2Q9NX18 166 aa13.13□□□□□ -0.31
GABPB1-201ENST00000220429 ABCG2Q9UNQ0 655 aa13.13□□□□□ -0.31
GABPB1-201ENST00000220429 KCTD3Q9Y597 815 aa13.13□□□□□ -0.31
GABPB1-201ENST00000220429 MICAL3Q7RTP6 2002 aa13.13□□□□□ -0.31
GABPB1-201ENST00000220429 LOC285095A0A1B0GVY8 99 aa13.13□□□□□ -0.31
GABPB1-201ENST00000220429 A0A1W2PPL8 197 aa13.13□□□□□ -0.31
GABPB1-201ENST00000220429 SFTPCP11686 197 aa13.13□□□□□ -0.31
GABPB1-201ENST00000220429 TACR2P21452 398 aa13.13□□□□□ -0.31
GABPB1-201ENST00000220429 CHRNB3Q05901 458 aa13.13□□□□□ -0.31
GABPB1-201ENST00000220429 CSHL1Q14406 222 aa13.13□□□□□ -0.31
GABPB1-201ENST00000220429 SMN1Q16637 294 aaKnown RBP13.13□□□□□ -0.31
GABPB1-201ENST00000220429 MICAQ29983 383 aa13.13□□□□□ -0.31
GABPB1-201ENST00000220429 FUT11Q495W5 492 aa13.13□□□□□ -0.31
GABPB1-201ENST00000220429 STX12Q86Y82 276 aa13.13□□□□□ -0.31
GABPB1-201ENST00000220429 CILP2Q8IUL8 1156 aa13.13□□□□□ -0.31
GABPB1-201ENST00000220429 SRFBP1Q8NEF9 429 aaKnown RBP13.13□□□□□ -0.31
GABPB1-201ENST00000220429 GPR151Q8TDV0 419 aa13.13□□□□□ -0.31
GABPB1-201ENST00000220429 SEMA3CQ99985 751 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms