RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 CILP2Q8IUL8 1156 aa13.27□□□□□ -0.29
SIX4-201ENST00000216513 PIK3C3Q8NEB9 887 aa13.27□□□□□ -0.29
SIX4-201ENST00000216513 EFHD2Q96C19 240 aaPredicted RBP13.27□□□□□ -0.29
SIX4-201ENST00000216513 TTYH1Q9H313 450 aaPredicted RBP13.27□□□□□ -0.29
SIX4-201ENST00000216513 BRD7Q9NPI1 651 aa13.27□□□□□ -0.29
SIX4-201ENST00000216513 GALPQ9UBC7 116 aa13.27□□□□□ -0.29
SIX4-201ENST00000216513 XKP51811 444 aa13.26□□□□□ -0.29
SIX4-201ENST00000216513 ITGA1P56199 1179 aa13.26□□□□□ -0.29
SIX4-201ENST00000216513 CTBSQ01459 385 aa13.26□□□□□ -0.29
SIX4-201ENST00000216513 ADRM1Q16186 407 aa13.26□□□□□ -0.29
SIX4-201ENST00000216513 NRROSQ86YC3 692 aa13.26□□□□□ -0.29
SIX4-201ENST00000216513 OR4N5Q8IXE1 308 aa13.26□□□□□ -0.29
SIX4-201ENST00000216513 WDTC1Q8N5D0 677 aa13.26□□□□□ -0.29
SIX4-201ENST00000216513 LRRC57Q8N9N7 239 aa13.26□□□□□ -0.29
SIX4-201ENST00000216513 TIGARQ9NQ88 270 aa13.26□□□□□ -0.29
SIX4-201ENST00000216513 ACTR10Q9NZ32 417 aa13.26□□□□□ -0.29
SIX4-201ENST00000216513 OPN1SWP03999 348 aa13.26□□□□□ -0.29
SIX4-201ENST00000216513 ZNF33BQ06732 778 aa13.26□□□□□ -0.29
SIX4-201ENST00000216513 SLAMF1Q13291 335 aa13.26□□□□□ -0.29
SIX4-201ENST00000216513 CCDC116Q8IYX3 515 aa13.26□□□□□ -0.29
SIX4-201ENST00000216513 NKD1Q969G9 470 aa13.26□□□□□ -0.29
SIX4-201ENST00000216513 TMCO6Q96DC7 493 aa13.26□□□□□ -0.29
SIX4-201ENST00000216513 NSMCE3Q96MG7 304 aa13.26□□□□□ -0.29
SIX4-201ENST00000216513 PRODH2Q9UF12 536 aa13.26□□□□□ -0.29
SIX4-201ENST00000216513 BRINP1O60477 761 aa13.26□□□□□ -0.29
SIX4-201ENST00000216513 MED26O95402 600 aa13.26□□□□□ -0.29
SIX4-201ENST00000216513 PTGIRP43119 386 aa13.26□□□□□ -0.29
SIX4-201ENST00000216513 NOVP48745 357 aa13.26□□□□□ -0.29
SIX4-201ENST00000216513 SHC2P98077 582 aa13.26□□□□□ -0.29
SIX4-201ENST00000216513 KLF10Q13118 480 aa13.26□□□□□ -0.29
SIX4-201ENST00000216513 CAMK1Q14012 370 aa13.26□□□□□ -0.29
SIX4-201ENST00000216513 NFATC4Q14934 902 aa13.26□□□□□ -0.29
SIX4-201ENST00000216513 HSD11B1LQ7Z5J1 315 aa13.26□□□□□ -0.29
SIX4-201ENST00000216513 MRGPRX2Q96LB1 330 aa13.26□□□□□ -0.29
SIX4-201ENST00000216513 OR6C1Q96RD1 312 aa13.26□□□□□ -0.29
SIX4-201ENST00000216513 KCNA7Q96RP8 456 aa13.26□□□□□ -0.29
SIX4-201ENST00000216513 TAS2R9Q9NYW1 312 aa13.26□□□□□ -0.29
SIX4-201ENST00000216513 CPNE7Q9UBL6 633 aa13.26□□□□□ -0.29
SIX4-201ENST00000216513 GOLGA4Q13439 2230 aaKnown RBP13.26□□□□□ -0.29
SIX4-201ENST00000216513 TMEM221A6NGB7 291 aa13.26□□□□□ -0.29
SIX4-201ENST00000216513 M0R296 226 aa13.26□□□□□ -0.29
SIX4-201ENST00000216513 KHDRBS3O75525 346 aaKnown RBP13.26□□□□□ -0.29
SIX4-201ENST00000216513 AHSGP02765 367 aa13.26□□□□□ -0.29
SIX4-201ENST00000216513 ACADLP28330 430 aa13.26□□□□□ -0.29
SIX4-201ENST00000216513 DCST1Q5T197 706 aa13.26□□□□□ -0.29
SIX4-201ENST00000216513 TMEM225Q6GV28 225 aa13.26□□□□□ -0.29
SIX4-201ENST00000216513 GLYATQ6IB77 296 aa13.26□□□□□ -0.29
SIX4-201ENST00000216513 IFT27Q9BW83 186 aa13.26□□□□□ -0.29
SIX4-201ENST00000216513 AMBNQ9NP70 447 aa13.26□□□□□ -0.29
SIX4-201ENST00000216513 ZNF282Q9UDV7 671 aaPredicted RBP13.26□□□□□ -0.29
SIX4-201ENST00000216513 SAMD4AQ9UPU9 718 aaKnown RBP13.26□□□□□ -0.29
SIX4-201ENST00000216513 NPIPA2E9PIF3 369 aa13.26□□□□□ -0.29
SIX4-201ENST00000216513 NPIPA3F8WFD2 350 aa13.26□□□□□ -0.29
SIX4-201ENST00000216513 NARSO43776 548 aaKnown RBP13.26□□□□□ -0.29
SIX4-201ENST00000216513 IL4RP24394 825 aa13.26□□□□□ -0.29
SIX4-201ENST00000216513 HOXD9P28356 352 aaPredicted RBP13.26□□□□□ -0.29
SIX4-201ENST00000216513 INHBCP55103 352 aa13.26□□□□□ -0.29
SIX4-201ENST00000216513 KRT74Q7RTS7 529 aa13.26□□□□□ -0.29
SIX4-201ENST00000216513 ZNF689Q96CS4 500 aaPredicted RBP13.26□□□□□ -0.29
SIX4-201ENST00000216513 SCRN2Q96FV2 425 aa13.26□□□□□ -0.29
SIX4-201ENST00000216513 LRMDAQ9H2I8 198 aa13.26□□□□□ -0.29
SIX4-201ENST00000216513 PLD2O14939 933 aa13.25□□□□□ -0.29
SIX4-201ENST00000216513 RENP00797 406 aa13.25□□□□□ -0.29
SIX4-201ENST00000216513 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.25□□□□□ -0.29
SIX4-201ENST00000216513 GALNTL5Q7Z4T8 443 aa13.25□□□□□ -0.29
SIX4-201ENST00000216513 ZNF433Q8N7K0 673 aaPredicted RBP13.25□□□□□ -0.29
SIX4-201ENST00000216513 KCNJ9Q92806 393 aa13.25□□□□□ -0.29
SIX4-201ENST00000216513 SOX17Q9H6I2 414 aaPredicted RBP13.25□□□□□ -0.29
SIX4-201ENST00000216513 CHMP1AQ9HD42 196 aaPredicted RBP13.25□□□□□ -0.29
SIX4-201ENST00000216513 SLC35C2Q9NQQ7 365 aa13.25□□□□□ -0.29
SIX4-201ENST00000216513 HSFX1Q9UBD0 423 aa13.25□□□□□ -0.29
SIX4-201ENST00000216513 LRCH1Q9Y2L9 728 aa13.25□□□□□ -0.29
SIX4-201ENST00000216513 DNMT3AQ9Y6K1 912 aaPredicted RBP13.25□□□□□ -0.29
SIX4-201ENST00000216513 DIRAS1O95057 198 aa13.25□□□□□ -0.29
SIX4-201ENST00000216513 F11P03951 625 aa13.25□□□□□ -0.29
SIX4-201ENST00000216513 TIMP2P16035 220 aa13.25□□□□□ -0.29
SIX4-201ENST00000216513 AZGP1P25311 298 aaKnown RBP13.25□□□□□ -0.29
SIX4-201ENST00000216513 IDH3AP50213 366 aa13.25□□□□□ -0.29
SIX4-201ENST00000216513 HERVK_113P63132 956 aa13.25□□□□□ -0.29
SIX4-201ENST00000216513 TLR1Q15399 786 aa13.25□□□□□ -0.29
SIX4-201ENST00000216513 TMEM214Q6NUQ4 689 aaKnown RBP13.25□□□□□ -0.29
SIX4-201ENST00000216513 GALNT10Q86SR1 603 aa13.25□□□□□ -0.29
SIX4-201ENST00000216513 LPGAT1Q92604 370 aa13.25□□□□□ -0.29
SIX4-201ENST00000216513 ERVK-6Q9BXR3 956 aa13.25□□□□□ -0.29
SIX4-201ENST00000216513 TM7SF3Q9NS93 570 aa13.25□□□□□ -0.29
SIX4-201ENST00000216513 ATXN10Q9UBB4 475 aa13.25□□□□□ -0.29
SIX4-201ENST00000216513 TCHHQ07283 1943 aa13.25□□□□□ -0.29
SIX4-201ENST00000216513 EPOP01588 193 aa13.25□□□□□ -0.29
SIX4-201ENST00000216513 GABRA3P34903 492 aa13.25□□□□□ -0.29
SIX4-201ENST00000216513 ABATP80404 500 aa13.25□□□□□ -0.29
SIX4-201ENST00000216513 SNAPC1Q16533 368 aa13.25□□□□□ -0.29
SIX4-201ENST00000216513 PM20D1Q6GTS8 502 aa13.25□□□□□ -0.29
SIX4-201ENST00000216513 PSAPL1Q6NUJ1 521 aa13.25□□□□□ -0.29
SIX4-201ENST00000216513 ERICH5Q6P6B1 374 aa13.25□□□□□ -0.29
SIX4-201ENST00000216513 SLC44A3Q8N4M1 653 aa13.25□□□□□ -0.29
SIX4-201ENST00000216513 OR4F6Q8NGB9 312 aa13.25□□□□□ -0.29
SIX4-201ENST00000216513 Q96MT0 163 aa13.25□□□□□ -0.29
SIX4-201ENST00000216513 CENPMQ9NSP4 180 aa13.25□□□□□ -0.29
SIX4-201ENST00000216513 PAPPAQ13219 1627 aa13.25□□□□□ -0.29
SIX4-201ENST00000216513 MYH14Q7Z406 1995 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms