RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 SP140Q13342 867 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 AGAP7PQ5VUJ5 663 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 DNASE1L2Q92874 299 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 PLD4Q96BZ4 506 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 ZNF436Q9C0F3 470 aaPredicted RBP10.13□□□□□ -0.79
VCL-201ENST00000211998 ZFR2Q9UPR6 939 aaKnown RBP10.13□□□□□ -0.79
VCL-201ENST00000211998 RUVBL1Q9Y265 456 aaKnown RBP10.13□□□□□ -0.79
VCL-201ENST00000211998 TEX13CA0A0J9YWL9 993 aa10.12□□□□□ -0.79
VCL-201ENST00000211998 RAB19A4D1S5 217 aa10.12□□□□□ -0.79
VCL-201ENST00000211998 MSI1O43347 362 aaKnown RBP10.12□□□□□ -0.79
VCL-201ENST00000211998 CREBL2O60519 120 aaPredicted RBP10.12□□□□□ -0.79
VCL-201ENST00000211998 ACVR2AP27037 513 aa10.12□□□□□ -0.79
VCL-201ENST00000211998 AP1S1P61966 158 aa10.12□□□□□ -0.79
VCL-201ENST00000211998 GK2Q14410 553 aaPredicted RBP10.12□□□□□ -0.79
VCL-201ENST00000211998 ATAT1Q5SQI0 421 aa10.12□□□□□ -0.79
VCL-201ENST00000211998 CFAP77Q6ZQR2 320 aa10.12□□□□□ -0.79
VCL-201ENST00000211998 PLD6Q8N2A8 252 aaKnown RBP10.12□□□□□ -0.79
VCL-201ENST00000211998 GPR152Q8TDT2 470 aa10.12□□□□□ -0.79
VCL-201ENST00000211998 UPF1Q92900 1129 aaKnown RBP eCLIP10.12□□□□□ -0.794e-21■■■■□ 24.8
VCL-201ENST00000211998 ELMOD3Q96FG2 381 aa10.12□□□□□ -0.79
VCL-201ENST00000211998 ZBTB20Q9HC78 741 aaPredicted RBP10.12□□□□□ -0.79
VCL-201ENST00000211998 IMP3Q9NV31 184 aaKnown RBP10.12□□□□□ -0.79
VCL-201ENST00000211998 COLEC10Q9Y6Z7 277 aa10.12□□□□□ -0.79
VCL-201ENST00000211998 IRS2Q9Y4H2 1338 aa10.12□□□□□ -0.79
VCL-201ENST00000211998 A0A1B0GVM2 712 aa10.12□□□□□ -0.79
VCL-201ENST00000211998 ELOA3DA6NLF2 546 aaPredicted RBP10.12□□□□□ -0.79
VCL-201ENST00000211998 MS4A2Q01362 244 aa10.12□□□□□ -0.79
VCL-201ENST00000211998 ABHD18Q0P651 414 aa10.12□□□□□ -0.79
VCL-201ENST00000211998 ELOA3BQ3SY89 546 aa10.12□□□□□ -0.79
VCL-201ENST00000211998 ABCA11PQ4W5N1 156 aa10.12□□□□□ -0.79
VCL-201ENST00000211998 CLVS2Q5SYC1 327 aa10.12□□□□□ -0.79
VCL-201ENST00000211998 CHST9Q7L1S5 443 aa10.12□□□□□ -0.79
VCL-201ENST00000211998 NPAS4Q8IUM7 802 aa10.12□□□□□ -0.79
VCL-201ENST00000211998 MTMR14Q8NCE2 650 aa10.12□□□□□ -0.79
VCL-201ENST00000211998 ELOA3Q8NG57 546 aa10.12□□□□□ -0.79
VCL-201ENST00000211998 OR6K6Q8NGW6 343 aa10.12□□□□□ -0.79
VCL-201ENST00000211998 ASF1BQ9NVP2 202 aa10.12□□□□□ -0.79
VCL-201ENST00000211998 STUB1Q9UNE7 303 aa10.12□□□□□ -0.79
VCL-201ENST00000211998 PCDHGB7Q9Y5F8 929 aa10.12□□□□□ -0.79
VCL-201ENST00000211998 PCDHGB1Q9Y5G3 927 aa10.12□□□□□ -0.79
VCL-201ENST00000211998 PCDHGA7Q9Y5G6 932 aa10.12□□□□□ -0.79
VCL-201ENST00000211998 GLTPD2A6NH11 291 aa10.12□□□□□ -0.79
VCL-201ENST00000211998 SPDEFO95238 335 aa10.12□□□□□ -0.79
VCL-201ENST00000211998 CH25HO95992 272 aa10.12□□□□□ -0.79
VCL-201ENST00000211998 GSTM3P21266 225 aa10.12□□□□□ -0.79
VCL-201ENST00000211998 PTPN6P29350 595 aa10.12□□□□□ -0.79
VCL-201ENST00000211998 L1CAMP32004 1257 aa10.12□□□□□ -0.79
VCL-201ENST00000211998 SLC10A7Q0GE19 358 aa10.12□□□□□ -0.79
VCL-201ENST00000211998 SLC30A8Q8IWU4 369 aa10.12□□□□□ -0.79
VCL-201ENST00000211998 CFAP52Q8N1V2 620 aa10.12□□□□□ -0.79
VCL-201ENST00000211998 ESX1Q8N693 406 aa10.12□□□□□ -0.79
VCL-201ENST00000211998 ZNF676Q8N7Q3 588 aa10.12□□□□□ -0.79
VCL-201ENST00000211998 CHDHQ8NE62 594 aaPredicted RBP10.12□□□□□ -0.79
VCL-201ENST00000211998 CNTNAP3BQ96NU0 1288 aa10.12□□□□□ -0.79
VCL-201ENST00000211998 SLC25A51Q9H1U9 297 aa10.12□□□□□ -0.79
VCL-201ENST00000211998 C14orf105Q9NVL8 296 aa10.12□□□□□ -0.79
VCL-201ENST00000211998 EXOSC1Q9Y3B2 195 aaKnown RBP10.12□□□□□ -0.79
VCL-201ENST00000211998 SDHDO14521 159 aa10.12□□□□□ -0.79
VCL-201ENST00000211998 C22orf31O95567 290 aa10.12□□□□□ -0.79
VCL-201ENST00000211998 PRPS1L1P21108 318 aa10.12□□□□□ -0.79
VCL-201ENST00000211998 IL4RP24394 825 aa10.12□□□□□ -0.79
VCL-201ENST00000211998 DSG2Q14126 1118 aa10.12□□□□□ -0.79
VCL-201ENST00000211998 GPR68Q15743 365 aa10.12□□□□□ -0.79
VCL-201ENST00000211998 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.12□□□□□ -0.79
VCL-201ENST00000211998 AKR1C8PQ5T2L2 129 aa10.12□□□□□ -0.79
VCL-201ENST00000211998 CGB2Q6NT52 195 aa10.12□□□□□ -0.79
VCL-201ENST00000211998 CEP68Q76N32 757 aa10.12□□□□□ -0.79
VCL-201ENST00000211998 RANBP3LQ86VV4 465 aaPredicted RBP10.12□□□□□ -0.79
VCL-201ENST00000211998 METTL4Q8N3J2 472 aa10.12□□□□□ -0.79
VCL-201ENST00000211998 ACBD4Q8NC06 268 aa10.12□□□□□ -0.79
VCL-201ENST00000211998 OR8K5Q8NH50 307 aa10.12□□□□□ -0.79
VCL-201ENST00000211998 KCNA7Q96RP8 456 aa10.12□□□□□ -0.79
VCL-201ENST00000211998 RANGRFQ9HD47 186 aaPredicted RBP10.12□□□□□ -0.79
VCL-201ENST00000211998 DMAC2Q9NW81 257 aa10.12□□□□□ -0.79
VCL-201ENST00000211998 MAGED1Q9Y5V3 778 aaPredicted RBP10.12□□□□□ -0.79
VCL-201ENST00000211998 CNTN5O94779 1100 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 AHSGP02765 367 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 FUCA1P04066 466 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 CELP19835 753 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 CD6P30203 668 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 AGTR1P30556 359 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 FGL1Q08830 312 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 PXDC1Q5TGL8 231 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 ZNF529Q6P280 563 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 MED27Q6P2C8 311 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 FAM217AQ8IXS0 508 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 BEST3Q8N1M1 668 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 OR6Q1Q8NGQ2 317 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 SCGB3A2Q96PL1 93 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 ZNF416Q9BWM5 594 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 OR10A4Q9H209 315 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 SLC28A3Q9HAS3 691 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 LYARQ9NX58 379 aaKnown RBP10.11□□□□□ -0.79
VCL-201ENST00000211998 GALPQ9UBC7 116 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 SCP2D1Q9UJQ7 156 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 HCN4Q9Y3Q4 1203 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 ANKRD33BA6NCL7 494 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 MATN3O15232 486 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 PEX14O75381 377 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 HTR1EP28566 365 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms