RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 DNAJC14Q6Y2X3 702 aaPredicted RBP18.82■□□□□ 0.6
TNFRSF1A-201ENST00000162749 MAMSTRQ6ZN01 415 aa18.82■□□□□ 0.6
TNFRSF1A-201ENST00000162749 ARPINQ7Z6K5 226 aa18.82■□□□□ 0.6
TNFRSF1A-201ENST00000162749 ANKRD46Q86W74 232 aa18.82■□□□□ 0.6
TNFRSF1A-201ENST00000162749 FAM46DQ8NEK8 389 aa18.82■□□□□ 0.6
TNFRSF1A-201ENST00000162749 OR8J2Q8NGG1 315 aa18.82■□□□□ 0.6
TNFRSF1A-201ENST00000162749 F2RL3Q96RI0 385 aa18.82■□□□□ 0.6
TNFRSF1A-201ENST00000162749 SORBS1Q9BX66 1292 aaKnown RBP18.82■□□□□ 0.6
TNFRSF1A-201ENST00000162749 ALG2Q9H553 416 aa18.82■□□□□ 0.6
TNFRSF1A-201ENST00000162749 MAN2B2Q9Y2E5 1009 aa18.82■□□□□ 0.6
TNFRSF1A-201ENST00000162749 BTBD3Q9Y2F9 522 aa18.82■□□□□ 0.6
TNFRSF1A-201ENST00000162749 KLHL20Q9Y2M5 609 aa18.82■□□□□ 0.6
TNFRSF1A-201ENST00000162749 HAT1O14929 419 aa18.81■□□□□ 0.6
TNFRSF1A-201ENST00000162749 DFNA5O60443 496 aa18.81■□□□□ 0.6
TNFRSF1A-201ENST00000162749 KLHL18O94889 574 aa18.81■□□□□ 0.6
TNFRSF1A-201ENST00000162749 KLK1P06870 262 aa18.81■□□□□ 0.6
TNFRSF1A-201ENST00000162749 BCL6P41182 706 aa18.81■□□□□ 0.6
TNFRSF1A-201ENST00000162749 FOLH1Q04609 750 aa18.81■□□□□ 0.6
TNFRSF1A-201ENST00000162749 RNF220Q5VTB9 566 aa18.81■□□□□ 0.6
TNFRSF1A-201ENST00000162749 ZNF425Q6IV72 752 aa18.81■□□□□ 0.6
TNFRSF1A-201ENST00000162749 CREB3L4Q8TEY5 395 aa18.81■□□□□ 0.6
TNFRSF1A-201ENST00000162749 SLC22A18Q96BI1 424 aa18.81■□□□□ 0.6
TNFRSF1A-201ENST00000162749 SARGQ9BW04 601 aa18.81■□□□□ 0.6
TNFRSF1A-201ENST00000162749 SLC6A13Q9NSD5 602 aa18.81■□□□□ 0.6
TNFRSF1A-201ENST00000162749 SLC25A37Q9NYZ2 338 aa18.81■□□□□ 0.6
TNFRSF1A-201ENST00000162749 EXO1Q9UQ84 846 aaKnown RBP18.81■□□□□ 0.6
TNFRSF1A-201ENST00000162749 ARID1BQ8NFD5 2236 aaPredicted RBP18.81■□□□□ 0.6
TNFRSF1A-201ENST00000162749 SCN3AQ9NY46 2000 aa18.81■□□□□ 0.6
TNFRSF1A-201ENST00000162749 PIM1P11309 404 aaPredicted RBP18.81■□□□□ 0.6
TNFRSF1A-201ENST00000162749 MTPNP58546 118 aa18.81■□□□□ 0.6
TNFRSF1A-201ENST00000162749 RHDQ02161 417 aa18.81■□□□□ 0.6
TNFRSF1A-201ENST00000162749 KIR2DS3Q14952 304 aa18.81■□□□□ 0.6
TNFRSF1A-201ENST00000162749 SPATS1Q496A3 300 aa18.81■□□□□ 0.6
TNFRSF1A-201ENST00000162749 ANKRD26P1Q6NSI1 321 aa18.81■□□□□ 0.6
TNFRSF1A-201ENST00000162749 TSSK4Q6SA08 328 aa18.81■□□□□ 0.6
TNFRSF1A-201ENST00000162749 MSRB3Q8IXL7 192 aa18.81■□□□□ 0.6
TNFRSF1A-201ENST00000162749 ADCY4Q8NFM4 1077 aa18.81■□□□□ 0.6
TNFRSF1A-201ENST00000162749 TTLQ8NG68 377 aa18.81■□□□□ 0.6
TNFRSF1A-201ENST00000162749 ZDHHC1Q8WTX9 485 aa18.81■□□□□ 0.6
TNFRSF1A-201ENST00000162749 DNASE2BQ8WZ79 361 aa18.81■□□□□ 0.6
TNFRSF1A-201ENST00000162749 STARD8Q92502 1023 aa18.81■□□□□ 0.6
TNFRSF1A-201ENST00000162749 SLCO4A1Q96BD0 722 aa18.81■□□□□ 0.6
TNFRSF1A-201ENST00000162749 KCNH6Q9H252 994 aa18.81■□□□□ 0.6
TNFRSF1A-201ENST00000162749 RMND5AQ9H871 391 aa18.81■□□□□ 0.6
TNFRSF1A-201ENST00000162749 TRBV5-3A0A0A0MS03 114 aa18.8■□□□□ 0.6
TNFRSF1A-201ENST00000162749 GABRR3A8MPY1 467 aa18.8■□□□□ 0.6
TNFRSF1A-201ENST00000162749 SCN2BO60939 215 aa18.8■□□□□ 0.6
TNFRSF1A-201ENST00000162749 CLEC3AO75596 197 aa18.8■□□□□ 0.6
TNFRSF1A-201ENST00000162749 HRH2P25021 359 aa18.8■□□□□ 0.6
TNFRSF1A-201ENST00000162749 GSK3BP49841 420 aa18.8■□□□□ 0.6
TNFRSF1A-201ENST00000162749 WNT3P56703 355 aa18.8■□□□□ 0.6
TNFRSF1A-201ENST00000162749 SELPLGQ14242 412 aa18.8■□□□□ 0.6
TNFRSF1A-201ENST00000162749 LRIF1Q5T3J3 769 aa18.8■□□□□ 0.6
TNFRSF1A-201ENST00000162749 FOXB2Q5VYV0 432 aa18.8■□□□□ 0.6
TNFRSF1A-201ENST00000162749 MSANTD1Q6ZTZ1 278 aa18.8■□□□□ 0.6
TNFRSF1A-201ENST00000162749 PAIP1Q9H074 479 aaKnown RBP18.8■□□□□ 0.6
TNFRSF1A-201ENST00000162749 AHSPQ9NZD4 102 aa18.8■□□□□ 0.6
TNFRSF1A-201ENST00000162749 TCRBV3S1A0A5B6 114 aa18.8■□□□□ 0.6
TNFRSF1A-201ENST00000162749 RTCAO00442 366 aaKnown RBP18.8■□□□□ 0.6
TNFRSF1A-201ENST00000162749 LAMP1P11279 417 aa18.8■□□□□ 0.6
TNFRSF1A-201ENST00000162749 TPP2P29144 1249 aaPredicted RBP18.8■□□□□ 0.6
TNFRSF1A-201ENST00000162749 PTPN6P29350 595 aa18.8■□□□□ 0.6
TNFRSF1A-201ENST00000162749 GRIA3P42263 894 aa18.8■□□□□ 0.6
TNFRSF1A-201ENST00000162749 LIPEQ05469 1076 aa18.8■□□□□ 0.6
TNFRSF1A-201ENST00000162749 GTDC1Q4AE62 458 aa18.8■□□□□ 0.6
TNFRSF1A-201ENST00000162749 APLFQ8IW19 511 aaPredicted RBP18.8■□□□□ 0.6
TNFRSF1A-201ENST00000162749 OR8J3Q8NGG0 315 aa18.8■□□□□ 0.6
TNFRSF1A-201ENST00000162749 OR10G6Q8NH81 332 aa18.8■□□□□ 0.6
TNFRSF1A-201ENST00000162749 ITCHQ96J02 903 aa18.8■□□□□ 0.6
TNFRSF1A-201ENST00000162749 OR2A14Q96R47 310 aa18.8■□□□□ 0.6
TNFRSF1A-201ENST00000162749 INPP5KQ9BT40 448 aa18.8■□□□□ 0.6
TNFRSF1A-201ENST00000162749 DUSP15Q9H1R2 295 aaPredicted RBP18.8■□□□□ 0.6
TNFRSF1A-201ENST00000162749 SYNPO2LQ9H987 977 aa18.8■□□□□ 0.6
TNFRSF1A-201ENST00000162749 LHX9Q9NQ69 397 aa18.8■□□□□ 0.6
TNFRSF1A-201ENST00000162749 PDP2Q9P2J9 529 aa18.8■□□□□ 0.6
TNFRSF1A-201ENST00000162749 PCDHB14Q9Y5E9 798 aa18.8■□□□□ 0.6
TNFRSF1A-201ENST00000162749 OR6C74A6NCV1 312 aa18.79■□□□□ 0.6
TNFRSF1A-201ENST00000162749 B4DGG1 531 aa18.79■□□□□ 0.6
TNFRSF1A-201ENST00000162749 ERN1O75460 977 aaKnown RBP18.79■□□□□ 0.6
TNFRSF1A-201ENST00000162749 POLR2CP19387 275 aaPredicted RBP18.79■□□□□ 0.6
TNFRSF1A-201ENST00000162749 BSGP35613 385 aa18.79■□□□□ 0.6
TNFRSF1A-201ENST00000162749 HPCAL1P37235 193 aa18.79■□□□□ 0.6
TNFRSF1A-201ENST00000162749 EEFSECP57772 596 aaKnown RBP18.79■□□□□ 0.6
TNFRSF1A-201ENST00000162749 NXPH1P58417 271 aa18.79■□□□□ 0.6
TNFRSF1A-201ENST00000162749 HHEXQ03014 270 aa18.79■□□□□ 0.6
TNFRSF1A-201ENST00000162749 ELOCQ15369 112 aa18.79■□□□□ 0.6
TNFRSF1A-201ENST00000162749 CYP2R1Q6VVX0 501 aa18.79■□□□□ 0.6
TNFRSF1A-201ENST00000162749 CAMKMTQ7Z624 323 aa18.79■□□□□ 0.6
TNFRSF1A-201ENST00000162749 IFNEQ86WN2 208 aa18.79■□□□□ 0.6
TNFRSF1A-201ENST00000162749 DNAJB8Q8NHS0 232 aa18.79■□□□□ 0.6
TNFRSF1A-201ENST00000162749 C16orf78Q8WTQ4 265 aa18.79■□□□□ 0.6
TNFRSF1A-201ENST00000162749 IKZF5Q9H5V7 419 aa18.79■□□□□ 0.6
TNFRSF1A-201ENST00000162749 MYNNQ9NPC7 610 aa18.79■□□□□ 0.6
TNFRSF1A-201ENST00000162749 SNX7Q9UNH6 387 aa18.79■□□□□ 0.6
TNFRSF1A-201ENST00000162749 MAPRE3Q9UPY8 281 aa18.79■□□□□ 0.6
TNFRSF1A-201ENST00000162749 AP4S1Q9Y587 144 aa18.79■□□□□ 0.6
TNFRSF1A-201ENST00000162749 PCDHGA4Q9Y5G9 962 aa18.79■□□□□ 0.6
TNFRSF1A-201ENST00000162749 YY2O15391 372 aa18.78■□□□□ 0.6
TNFRSF1A-201ENST00000162749 NDUFS4O43181 175 aa18.78■□□□□ 0.6
TNFRSF1A-201ENST00000162749 DENRO43583 198 aaKnown RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms