RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 CLVS1Q8IUQ0 354 aaPredicted RBP7.93□□□□□ -1.14
VAMP3-201ENST00000054666 SETD9Q8NE22 299 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 WDR48Q8TAF3 677 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 HDAC2Q92769 488 aaKnown RBP7.93□□□□□ -1.14
VAMP3-201ENST00000054666 TMIGD2Q96BF3 282 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 ELSPBP1Q96BH3 223 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 CHFRQ96EP1 664 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 MBOAT4Q96T53 435 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 C1QTNF7Q9BXJ2 289 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 SPNS1Q9H2V7 528 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 POLR1BQ9H9Y6 1135 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 RAPGEFL1Q9UHV5 662 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 ACSL5Q9ULC5 683 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 ABCG2Q9UNQ0 655 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 SAMHD1Q9Y3Z3 626 aaKnown RBP7.93□□□□□ -1.14
VAMP3-201ENST00000054666 PCYT1BQ9Y5K3 369 aaPredicted RBP7.93□□□□□ -1.14
VAMP3-201ENST00000054666 CFAP20Q9Y6A4 193 aaKnown RBP7.93□□□□□ -1.14
VAMP3-201ENST00000054666 CKAP5Q14008 2032 aa7.92□□□□□ -1.14
VAMP3-201ENST00000054666 LOC100130705A0A1B0GUX0 176 aa7.92□□□□□ -1.14
VAMP3-201ENST00000054666 ZNF701M0R085 212 aaPredicted RBP7.92□□□□□ -1.14
VAMP3-201ENST00000054666 GPR37L1O60883 481 aa7.92□□□□□ -1.14
VAMP3-201ENST00000054666 TRMUO75648 421 aaKnown RBP7.92□□□□□ -1.14
VAMP3-201ENST00000054666 KRT75O95678 551 aa7.92□□□□□ -1.14
VAMP3-201ENST00000054666 IL3P08700 152 aa7.92□□□□□ -1.14
VAMP3-201ENST00000054666 ITGAMP11215 1152 aa7.92□□□□□ -1.14
VAMP3-201ENST00000054666 ACP5P13686 325 aa7.92□□□□□ -1.14
VAMP3-201ENST00000054666 PIGAP37287 484 aa7.92□□□□□ -1.14
VAMP3-201ENST00000054666 PBX2P40425 430 aa7.92□□□□□ -1.14
VAMP3-201ENST00000054666 YAP1P46937 504 aaKnown RBP7.92□□□□□ -1.14
VAMP3-201ENST00000054666 CLCNKAP51800 687 aa7.92□□□□□ -1.14
VAMP3-201ENST00000054666 RPS6KA3P51812 740 aa7.92□□□□□ -1.14
VAMP3-201ENST00000054666 TAS2R38P59533 333 aa7.92□□□□□ -1.14
VAMP3-201ENST00000054666 GABARAPL2P60520 117 aa7.92□□□□□ -1.14
VAMP3-201ENST00000054666 RPS21P63220 83 aaKnown RBP7.92□□□□□ -1.14
VAMP3-201ENST00000054666 HBA1P69905 142 aa7.92□□□□□ -1.14
VAMP3-201ENST00000054666 CYP4F2P78329 520 aa7.92□□□□□ -1.14
VAMP3-201ENST00000054666 IL1RL1Q01638 556 aa7.92□□□□□ -1.14
VAMP3-201ENST00000054666 RBBP4Q09028 425 aa7.92□□□□□ -1.14
VAMP3-201ENST00000054666 SGCGQ13326 291 aa7.92□□□□□ -1.14
VAMP3-201ENST00000054666 AGERQ15109 404 aa7.92□□□□□ -1.14
VAMP3-201ENST00000054666 ZC3H12BQ5HYM0 836 aaKnown RBP7.92□□□□□ -1.14
VAMP3-201ENST00000054666 ATAT1Q5SQI0 421 aa7.92□□□□□ -1.14
VAMP3-201ENST00000054666 FAM71E1Q6IPT2 247 aa7.92□□□□□ -1.14
VAMP3-201ENST00000054666 KCTD8Q6ZWB6 473 aa7.92□□□□□ -1.14
VAMP3-201ENST00000054666 VTCN1Q7Z7D3 282 aa7.92□□□□□ -1.14
VAMP3-201ENST00000054666 GALNT10Q86SR1 603 aa7.92□□□□□ -1.14
VAMP3-201ENST00000054666 SLC9B2Q86UD5 537 aa7.92□□□□□ -1.14
VAMP3-201ENST00000054666 FAM129CQ86XR2 697 aa7.92□□□□□ -1.14
VAMP3-201ENST00000054666 ZNF740Q8NDX6 193 aa7.92□□□□□ -1.14
VAMP3-201ENST00000054666 OR52N2Q8NGI0 321 aa7.92□□□□□ -1.14
VAMP3-201ENST00000054666 GOT1L1Q8NHS2 421 aaPredicted RBP7.92□□□□□ -1.14
VAMP3-201ENST00000054666 LZICQ8WZA0 190 aa7.92□□□□□ -1.14
VAMP3-201ENST00000054666 MAGED4Q96JG8 741 aa7.92□□□□□ -1.14
VAMP3-201ENST00000054666 QRFPRQ96P65 431 aa7.92□□□□□ -1.14
VAMP3-201ENST00000054666 SH3GL3Q99963 347 aa7.92□□□□□ -1.14
VAMP3-201ENST00000054666 TRMT61BQ9BVS5 477 aaKnown RBP7.92□□□□□ -1.14
VAMP3-201ENST00000054666 LGR4Q9BXB1 951 aa7.92□□□□□ -1.14
VAMP3-201ENST00000054666 NPLQ9BXD5 320 aaPredicted RBP7.92□□□□□ -1.14
VAMP3-201ENST00000054666 RAB11FIP5Q9BXF6 653 aa7.92□□□□□ -1.14
VAMP3-201ENST00000054666 TEX101Q9BY14 249 aa7.92□□□□□ -1.14
VAMP3-201ENST00000054666 PBX4Q9BYU1 374 aa7.92□□□□□ -1.14
VAMP3-201ENST00000054666 PITHD1Q9GZP4 211 aaPredicted RBP7.92□□□□□ -1.14
VAMP3-201ENST00000054666 CHST8Q9H2A9 424 aa7.92□□□□□ -1.14
VAMP3-201ENST00000054666 NKX2-4Q9H2Z4 354 aa7.92□□□□□ -1.14
VAMP3-201ENST00000054666 RUBCNLQ9H714 662 aa7.92□□□□□ -1.14
VAMP3-201ENST00000054666 SLC23A2Q9UGH3 650 aa7.92□□□□□ -1.14
VAMP3-201ENST00000054666 OR1A2Q9Y585 309 aa7.92□□□□□ -1.14
VAMP3-201ENST00000054666 DOCK8Q8NF50 2099 aa7.92□□□□□ -1.14
VAMP3-201ENST00000054666 A0A1W2PRB8 838 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 PRR23AA6NEV1 266 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 UGT2B11O75310 529 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 C1QCP02747 245 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 SEMG1P04279 462 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 IL7RP16871 459 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 PRKACGP22612 351 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 AQP1P29972 269 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 PRIM2P49643 509 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 MAPK12P53778 367 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 SEC13P55735 322 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 VLDLRP98155 873 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 REEP5Q00765 189 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 DMPKQ09013 629 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 KRT33BQ14525 404 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 SHHQ15465 462 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 NEDD8Q15843 81 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 KHDRBS2Q5VWX1 349 aaKnown RBP7.91□□□□□ -1.14
VAMP3-201ENST00000054666 KIAA1161Q6NSJ0 714 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 ANKRD54Q6NXT1 300 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 CHST15Q7LFX5 561 aaPredicted RBP7.91□□□□□ -1.14
VAMP3-201ENST00000054666 ADCK2Q7Z695 626 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 TMEM179BQ7Z7N9 219 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 DCP2Q8IU60 420 aaKnown RBP7.91□□□□□ -1.14
VAMP3-201ENST00000054666 ERI1Q8IV48 349 aaKnown RBP7.91□□□□□ -1.14
VAMP3-201ENST00000054666 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.91□□□□□ -1.14
VAMP3-201ENST00000054666 NATD1Q8N6N6 113 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 PIK3C3Q8NEB9 887 aa7.91□□□□□ -1.14
VAMP3-201ENST00000054666 ZNF420Q8TAQ5 688 aaPredicted RBP7.91□□□□□ -1.14
VAMP3-201ENST00000054666 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.91□□□□□ -1.14
VAMP3-201ENST00000054666 CIDECQ96AQ7 238 aaPredicted RBP7.91□□□□□ -1.14
VAMP3-201ENST00000054666 ISOC1Q96CN7 298 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms