RNA–Protein interactions for RNA: ENSMUST00000139443.7

Hmgb1-208, Transcript of High mobility group protein B1, mousemouse

TSL 2 BASIC

Gene Hmgb1, Length 923 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-208ENSMUST00000139443 Ext2P70428 718 aa14.65□□□□□ -0.06
Hmgb1-208ENSMUST00000139443 Kir3dl1P83555 432 aa14.65□□□□□ -0.06
Hmgb1-208ENSMUST00000139443 Fezf1Q0VDQ9 475 aa14.65□□□□□ -0.06
Hmgb1-208ENSMUST00000139443 Mmp25Q3U435 615 aa14.65□□□□□ -0.06
Hmgb1-208ENSMUST00000139443 Eml4Q3UMY5 988 aa14.65□□□□□ -0.06
Hmgb1-208ENSMUST00000139443 Slc5a12Q49B93 619 aa14.65□□□□□ -0.06
Hmgb1-208ENSMUST00000139443 Tbc1d31Q6NXY1 996 aa14.65□□□□□ -0.06
Hmgb1-208ENSMUST00000139443 Scn4bQ7M729 228 aa14.65□□□□□ -0.06
Hmgb1-208ENSMUST00000139443 Tmcc2Q80W04 706 aa14.65□□□□□ -0.06
Hmgb1-208ENSMUST00000139443 Wasf2Q8BH43 497 aa14.65□□□□□ -0.06
Hmgb1-208ENSMUST00000139443 Tbl3Q8C4J7 801 aaKnown RBP14.65□□□□□ -0.06
Hmgb1-208ENSMUST00000139443 Wdr47Q8CGF6 920 aa14.65□□□□□ -0.06
Hmgb1-208ENSMUST00000139443 Gramd1cQ8CI52 457 aa14.65□□□□□ -0.06
Hmgb1-208ENSMUST00000139443 Sh3glb2Q8R3V5 400 aa14.65□□□□□ -0.06
Hmgb1-208ENSMUST00000139443 Noxo1Q8VCM2 349 aa14.65□□□□□ -0.06
Hmgb1-208ENSMUST00000139443 Trmt5Q9D0C4 501 aa14.65□□□□□ -0.06
Hmgb1-208ENSMUST00000139443 Ern1Q9EQY0 977 aa14.65□□□□□ -0.06
Hmgb1-208ENSMUST00000139443 AnkhQ9JHZ2 492 aa14.65□□□□□ -0.06
Hmgb1-208ENSMUST00000139443 H2afyQ9QZQ8 372 aaKnown RBP14.65□□□□□ -0.06
Hmgb1-208ENSMUST00000139443 Ptpn13Q64512 2453 aa14.65□□□□□ -0.06
Hmgb1-208ENSMUST00000139443 Apc2Q9Z1K7 2274 aa14.64□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Lrrk2Q5S006 2527 aa14.64□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Col5a1O88207 1838 aa14.64□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Gm29554A0A087WNW4 188 aa14.64□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Dcaf10A2AKB9 566 aa14.64□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Ssxa1B1AUS7 101 aa14.64□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Kifc5bE9PUA5 672 aa14.64□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Slc9a3G3X939 829 aa14.64□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Rpl21O09167 160 aaKnown RBP14.64□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 GnazO70443 355 aa14.64□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Mettl17Q3U2U7 461 aa14.64□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 LbrQ3U9G9 626 aaKnown RBP14.64□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 UnklQ5FWH2 727 aaKnown RBP14.64□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Caprin1Q60865 707 aaKnown RBP14.64□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Olfr140Q60878 302 aa14.64□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Trim24Q64127 1051 aaKnown RBP14.64□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Q80WR5 230 aa14.64□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Enoph1Q8BGB7 257 aa14.64□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Gabra5Q8BHJ7 463 aa14.64□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 GanabQ8BHN3 944 aaKnown RBP14.64□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Gpr157Q8C206 330 aa14.64□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Trnt1Q8K1J6 434 aa14.64□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 CenpiQ8K1K4 746 aa14.64□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Kiaa2013Q91X21 634 aa14.64□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Ndufs4Q9CXZ1 175 aa14.64□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Ebna1bp2Q9D903 306 aaKnown RBP14.64□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Lrrc51Q9DAK8 192 aa14.64□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 MrgbpQ9DAT2 204 aa14.64□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 NpvfQ9ESQ8 188 aa14.64□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Myg1Q9JK81 380 aa14.64□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Tgm1Q9JLF6 815 aa14.64□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Dbf4Q9QZ41 663 aa14.64□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 FarsbQ9WUA2 589 aaKnown RBP14.64□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Katna1Q9WV86 491 aa14.64□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Ap1m2Q9WVP1 423 aa14.64□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Vmn1r90A0A087WR36 309 aa14.63□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Cped1B2RX70 1026 aa14.63□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 4933403O08RikF6UK53 379 aa14.63□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Zfp619G3X9T2 1161 aa14.63□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 CblP22682 913 aa14.63□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Man2a1P27046 1150 aa14.63□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Rpl36P47964 105 aaKnown RBP14.63□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 SctQ08535 133 aa14.63□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Q3U4G0 281 aa14.63□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 A630001G21RikQ3UTB2 229 aa14.63□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Pacs2Q3V3Q7 862 aa14.63□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Scn2bQ56A07 215 aa14.63□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Tnfaip3Q60769 775 aa14.63□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Htr1aQ64264 421 aa14.63□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Cep78Q6IRU7 790 aa14.63□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Slc51bQ80WK2 128 aa14.63□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Atl1Q8BH66 558 aa14.63□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Pgs1Q8BHF7 553 aa14.63□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Ankmy1Q8C0W1 906 aa14.63□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Ttc22Q8C159 568 aa14.63□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Tm6sf2Q8R1J1 378 aa14.63□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Epm2aip1Q8VEH5 606 aa14.63□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Ubl7Q91W67 380 aa14.63□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Fam76aQ922G2 307 aa14.63□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Tsnaxip1Q99P25 704 aa14.63□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Prl8a9Q9CQ58 241 aa14.63□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Nsa2Q9CR47 260 aaKnown RBP14.63□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Dhrs7Q9CXR1 338 aa14.63□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Tbc1d20Q9D9I4 402 aa14.63□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Maged2Q9ER67 616 aa14.63□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Cyp2d22Q9JKY7 500 aa14.63□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Itgb6Q9Z0T9 787 aa14.63□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Aldh18a1Q9Z110 795 aa14.63□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Bmpr2O35607 1038 aa14.62□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Sbk2P0C5K1 362 aa14.62□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 VaspP70460 375 aaKnown RBP14.62□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Dppa5bP85965 119 aa14.62□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Nkx3-2P97503 333 aa14.62□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Zfp935Q14DI0 353 aa14.62□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Sec31bQ3TZ89 1158 aa14.62□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Taar6Q5QD13 345 aa14.62□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Dnajc11Q5U458 559 aa14.62□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 ClpbQ60649 677 aa14.62□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Irgm1Q60766 409 aa14.62□□□□□ -0.07
Hmgb1-208ENSMUST00000139443 Fkbp10Q61576 581 aa14.62□□□□□ -0.07
Retrieved 100 of 22,080 RNA–protein pairs in 27.3 ms