RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Crlf2Q8CII9 359 aa9.46□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Fam129bQ8R1F1 749 aa9.46□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Sirt4Q8R216 333 aa9.46□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Mterf3Q8R3J4 412 aa9.46□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Gbgt1Q8VI38 347 aa9.46□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Acsl6Q91WC3 697 aa9.46□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Ms4a10Q99N03 267 aa9.46□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Marc1Q9CW42 340 aa9.46□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Bbs2Q9CWF6 721 aa9.46□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Gm14781A2A9Q9 366 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Olfr74A2BHP6 318 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 RerglB2RVE2 204 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 AF366264G3X9P9 502 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Sap18O55128 153 aaKnown RBP9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Stk16O88697 305 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Klk1b16P04071 261 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 ItgamP05555 1153 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Hoxd4P10628 250 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Cyr61P18406 379 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Cst3P21460 140 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Pcsk2P21661 637 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Znf800Q0VEE6 662 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Mageb5Q14AN0 366 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Nutm2Q3V0C3 733 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 ClpbQ60649 677 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Sim1Q61045 765 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Runx1t1Q61909 577 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Atg16l2Q6KAU8 623 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Slc7a6Q8BGK6 515 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Zc2hc1cQ8CCG1 527 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Bclaf1Q8K019 919 aaKnown RBP9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Olfr561Q8VGZ6 314 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 ApofQ91V80 315 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Myg1Q9JK81 380 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Oaz3Q9R109 243 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Pld1Q9Z280 1074 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Dennd4aE9Q8V6 1869 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Gm42688A0A0R3P9D1 673 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 A0A286YD17 136 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 PpigA2AR02 752 aaKnown RBP9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Mgat4eA6H684 439 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Gm28048F7BCN0 99 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Gm21800J3QMJ9 180 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Gm5152L7N200 190 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 P01644 108 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 P01645 108 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 P01646 108 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 P01647 108 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Bcl6P41183 707 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Aff3P51827 1254 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 HccsP53702 272 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 CtskP55097 329 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 GuloP58710 440 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Hp1bp3Q3TEA8 554 aaKnown RBP9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Cpxcr1Q3V0P1 322 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Rassf5Q5EBH1 413 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Klf4Q60793 483 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Laptm4aQ60961 233 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Stard3Q61542 446 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Dmc1Q61880 340 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Vwa2Q70UZ7 791 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Olfr1152Q7TR34 310 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Olfr320Q7TRZ4 306 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Cstf2Q8BIQ5 580 aaKnown RBP9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 PdhxQ8BKZ9 501 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 AcppQ8CE08 381 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Slc35b4Q8CIA5 331 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 ZwilchQ8R060 589 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 HopxQ8R1H0 73 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Blzf1Q8R2X8 403 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Med17Q8VCD5 649 aaKnown RBP9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Ndufs2Q91WD5 463 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Rbm47Q91WT8 590 aaKnown RBP9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 AjubaQ91XC0 547 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Tex19.2Q9D5S1 317 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Vmn1r29Q9EQ41 303 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Foxe3Q9QY14 288 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Vps29Q9QZ88 182 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Rad9aQ9Z0F6 389 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Gm28576A0A087WRP6 222 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 A0A286YCD0 109 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Gm14147A2AQX6 640 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Rdh8D3Z6W3 317 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Il20rbE9Q9A6 308 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Gm5861F6VCN9 180 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 4933402N22RikF7D1B3 190 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Tulp3O88413 460 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Lsp1P19973 330 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Cma1P21844 247 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 AcadvlP50544 656 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Nanos3P60324 178 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Rgs14P97492 547 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Tmem184cQ3TPR7 525 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Pyroxd2Q3U4I7 581 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Q3UK37 420 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Chsy3Q5DTK1 884 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Gm2aQ60648 193 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Olfr1051Q7TR76 308 aa9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Sf3b4Q8QZY9 424 aaKnown RBP9.45□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Mettl22Q8R1C6 393 aa9.45□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 15.7 ms