RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Oas3Q8VI93 1138 aaKnown RBP14.3□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Wdr45bQ9CR39 344 aa14.3□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 FancgQ9EQR6 623 aa14.3□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Slc25a14Q9Z2B2 325 aa14.3□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Olfr1253A2AUA2 318 aa14.3□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Skint2A7XUX6 400 aa14.3□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Gm8369E9PZI3 166 aa14.3□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Olfr288E9Q1P2 318 aa14.3□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Vmn2r21K7N6Y7 853 aa14.3□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Gm2888K7N746 267 aa14.3□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Vmn2r20L7N2B1 853 aa14.3□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Sod3O09164 251 aa14.3□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 P01636 108 aa14.3□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Cd86P42082 309 aa14.3□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 CratP47934 626 aa14.3□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Aqp8P56404 261 aa14.3□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Eef1a2P62631 463 aaKnown RBP14.3□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Fcho2Q3UQN2 809 aa14.3□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Mxd4Q60948 209 aa14.3□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 PtprcapQ64697 197 aa14.3□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Olfr1251Q7TQZ3 318 aa14.3□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Lamp3Q7TST5 411 aa14.3□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Enkd1Q7TSV9 346 aa14.3□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Cyth4Q80YW0 393 aa14.3□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Zadh2Q8BGC4 377 aa14.3□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Nup107Q8BH74 926 aa14.3□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Vmn1r22Q8R2D1 302 aa14.3□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Slc2a10Q8VHD6 536 aa14.3□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Slc25a37Q920G8 338 aa14.3□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Gkn2Q9CQS6 184 aa14.3□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Ska2Q9CR46 120 aa14.3□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 2310003L06RikQ9CV82 495 aa14.3□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Socs6Q9JLY0 533 aa14.3□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 TesminQ9WTJ6 475 aa14.3□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Smarcb1Q9Z0H3 385 aa14.3□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Dgat1Q9Z2A7 498 aa14.3□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Adh6aE9Q5Z6 375 aa14.29□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Rnpepl1G5E872 720 aa14.29□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Psmc3ipO35047 217 aa14.29□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Chrnb1P09690 501 aa14.29□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Mapk1P63085 358 aa14.29□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 AbrQ5SSL4 859 aa14.29□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 MarcoQ60754 518 aa14.29□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Map4k2Q61161 821 aa14.29□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Pabpc2Q62029 628 aa14.29□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Ubash3bQ8BGG7 638 aa14.29□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 SgtaQ8BJU0 315 aa14.29□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Smoc1Q8BLY1 463 aaKnown RBP14.29□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Tmem220Q8BP07 167 aa14.29□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Map2k7Q8CE90 535 aa14.29□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Klk6Q91Y82 253 aa14.29□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Tmem179bQ9CY24 219 aa14.29□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 TescQ9JKL5 214 aa14.29□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Slc2a5Q9WV38 501 aa14.29□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Mfsd13bA0A1L1SUA2 455 aa14.29□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 TomtA1Y9I9 258 aa14.29□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Fbxo47A2A6H3 451 aa14.29□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Skint9A7TZG3 319 aa14.29□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Gm5483B2RV77 97 aa14.29□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Pate1E9Q658 125 aa14.29□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Prss56F2YMG0 604 aa14.29□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Tmigd3G3X8R9 209 aa14.29□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Calhm3J3QMI4 347 aa14.29□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Gm10338K7N692 204 aa14.29□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Il1aP01582 270 aa14.29□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 FurinP23188 793 aa14.29□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Ccnb2P30276 398 aa14.29□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Rab23P35288 237 aa14.29□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Ppm1bP36993 390 aa14.29□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 GlrbP48168 496 aa14.29□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Cep44Q5HZK1 386 aa14.29□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 GstcdQ5RL51 634 aa14.29□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 DgkbQ6NS52 802 aa14.29□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Dusp11Q6NXK5 321 aaKnown RBP14.29□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Prrg3Q6PAQ9 231 aa14.29□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Syt16Q7TN83 639 aa14.29□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 F12Q80YC5 597 aa14.29□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 NanogQ80Z64 305 aa14.29□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Pramel7Q810Y8 479 aa14.29□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Ppm1nQ8BGL1 404 aa14.29□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Slc15a3Q8BPX9 578 aa14.29□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Fndc3aQ8BX90 1198 aa14.29□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 4931406P16RikQ8C5X1 1059 aa14.29□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 EloaQ8CB77 773 aaKnown RBP14.29□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 MINDY3Q9CV28 444 aa14.29□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Twist2Q9D030 160 aa14.29□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Plekhj1Q9D240 164 aa14.29□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Sp2Q9D2H6 612 aa14.29□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Tmem269Q9D4Y8 254 aa14.29□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Chrm3Q9ERZ3 589 aa14.29□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 EefsecQ9JHW4 583 aa14.29□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Plag1Q9QYE0 499 aa14.29□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Htatip2Q9Z2G9 242 aa14.29□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Tcte1A6H639 498 aa14.28□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 SelenovD3YXG1 328 aa14.28□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Gm17026K7N6Z0 213 aa14.28□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 MntO08789 591 aa14.28□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Rgs5O08850 181 aa14.28□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 HpnO35453 436 aa14.28□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Zw10O54692 779 aa14.28□□□□□ -0.12
Retrieved 100 of 22,080 RNA–protein pairs in 40.6 ms