RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Olfr1153A2AVC0 318 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Ssxa1B1AUS7 101 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Olfr310B2RVZ1 332 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Gm6811E9Q3Y8 510 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Cyp2d37-psF6YKB5 150 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Gm3542K7N6U2 270 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Mtx2O88441 263 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Gh1P06880 216 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Ntrk2P15209 821 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Myf5P24699 255 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Ythdf1P59326 559 aaKnown RBP8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Ppp1caP62137 330 aaKnown RBP8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Mapk1P63085 358 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Serpina3mQ03734 418 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Hoxc4Q08624 264 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Gsk3aQ2NL51 490 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Tmem248Q3TBN1 314 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Garem1Q3UFT3 876 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 E330014E10RikQ3UL33 481 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 D5Ertd577eQ499F0 481 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Tra2aQ6PFR5 281 aaKnown RBP8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Eif2s1Q6ZWX6 315 aaKnown RBP8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Plekha8Q80W71 519 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Amigo1Q80ZD8 492 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Thoc5Q8BKT7 683 aaKnown RBP8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Smyd4Q8BTK5 799 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Hat1Q8BY71 416 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Prdm8Q8BZ97 687 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Bhlhe22Q8C6A8 355 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Cdc42ep1Q91W92 409 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Klhdc8aQ91XA8 350 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Camk2gQ923T9 529 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Cstf3Q99LI7 717 aaKnown RBP8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 MtapQ9CQ65 283 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Khdc3Q9CWU5 440 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Marveld3Q9D956 376 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Ift46Q9DB07 301 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Spag4Q9JJF2 443 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Gm14295A2BG91 834 aa8.34□□□□□ -1.07
Trim39-201ENSMUST00000042717 SrsxB2RZI1 361 aa8.34□□□□□ -1.07
Trim39-201ENSMUST00000042717 Klhl3E0CZ16 587 aa8.34□□□□□ -1.07
Trim39-201ENSMUST00000042717 Zfp934K7N6H3 473 aa8.34□□□□□ -1.07
Trim39-201ENSMUST00000042717 Vmn1r31L7N2F1 303 aa8.34□□□□□ -1.07
Trim39-201ENSMUST00000042717 Galnt4O08832 578 aa8.34□□□□□ -1.07
Trim39-201ENSMUST00000042717 Pde9aO70628 534 aa8.34□□□□□ -1.07
Trim39-201ENSMUST00000042717 Dpy19l2P0CW70 773 aa8.34□□□□□ -1.07
Trim39-201ENSMUST00000042717 Tmem217Q14AF1 189 aa8.34□□□□□ -1.07
Trim39-201ENSMUST00000042717 Fahd2Q3TC72 313 aa8.34□□□□□ -1.07
Trim39-201ENSMUST00000042717 Plk5Q4FZD7 595 aa8.34□□□□□ -1.07
Trim39-201ENSMUST00000042717 Sema3gQ4LFA9 780 aa8.34□□□□□ -1.07
Trim39-201ENSMUST00000042717 Trav8d-2Q5R1B6 112 aa8.34□□□□□ -1.07
Trim39-201ENSMUST00000042717 Xlr3cQ61806 226 aa8.34□□□□□ -1.07
Trim39-201ENSMUST00000042717 Ptpn21Q62136 1176 aa8.34□□□□□ -1.07
Trim39-201ENSMUST00000042717 Rasgrp3Q6NZH9 691 aa8.34□□□□□ -1.07
Trim39-201ENSMUST00000042717 Rbbp8Q80YR6 893 aa8.34□□□□□ -1.07
Trim39-201ENSMUST00000042717 Sdhaf3Q8BQU3 125 aa8.34□□□□□ -1.07
Trim39-201ENSMUST00000042717 Tprg1Q8CB49 279 aa8.34□□□□□ -1.07
Trim39-201ENSMUST00000042717 B3gnt7Q8K0J2 397 aa8.34□□□□□ -1.07
Trim39-201ENSMUST00000042717 Olfr811Q8VFI1 319 aa8.34□□□□□ -1.07
Trim39-201ENSMUST00000042717 Syt17Q920M7 470 aa8.34□□□□□ -1.07
Trim39-201ENSMUST00000042717 DhddsQ99KU1 333 aa8.34□□□□□ -1.07
Trim39-201ENSMUST00000042717 Fis1Q9CQ92 152 aa8.34□□□□□ -1.07
Trim39-201ENSMUST00000042717 Gemin6Q9CX53 166 aa8.34□□□□□ -1.07
Trim39-201ENSMUST00000042717 Usp12Q9D9M2 370 aa8.34□□□□□ -1.07
Trim39-201ENSMUST00000042717 Rsph9Q9D9V4 276 aa8.34□□□□□ -1.07
Trim39-201ENSMUST00000042717 Cyb5r1Q9DB73 305 aa8.34□□□□□ -1.07
Trim39-201ENSMUST00000042717 Mageb4A2A9R3 556 aa8.34□□□□□ -1.07
Trim39-201ENSMUST00000042717 Pgm2A2CEK3 580 aa8.34□□□□□ -1.07
Trim39-201ENSMUST00000042717 Vsig10lD3YZF7 868 aa8.34□□□□□ -1.07
Trim39-201ENSMUST00000042717 Gm14139F6ZS36 494 aa8.34□□□□□ -1.07
Trim39-201ENSMUST00000042717 2610028H24RikG5E8K1 270 aa8.34□□□□□ -1.07
Trim39-201ENSMUST00000042717 Agpat1O35083 285 aa8.34□□□□□ -1.07
Trim39-201ENSMUST00000042717 CidebO70303 219 aa8.34□□□□□ -1.07
Trim39-201ENSMUST00000042717 Rtn2O70622 471 aa8.34□□□□□ -1.07
Trim39-201ENSMUST00000042717 Klk1P15947 261 aa8.34□□□□□ -1.07
Trim39-201ENSMUST00000042717 Csf2rbP26955 896 aa8.34□□□□□ -1.07
Trim39-201ENSMUST00000042717 Ruvbl1P60122 456 aaKnown RBP8.34□□□□□ -1.07
Trim39-201ENSMUST00000042717 Trpc1Q61056 793 aa8.34□□□□□ -1.07
Trim39-201ENSMUST00000042717 Olfr813Q7TRH5 310 aa8.34□□□□□ -1.07
Trim39-201ENSMUST00000042717 Fam83eQ80XS7 481 aa8.34□□□□□ -1.07
Trim39-201ENSMUST00000042717 Lrrc8dQ8BGR2 859 aa8.34□□□□□ -1.07
Trim39-201ENSMUST00000042717 Sec22cQ8BXT9 303 aa8.34□□□□□ -1.07
Trim39-201ENSMUST00000042717 Aqp12Q8CHJ2 290 aa8.34□□□□□ -1.07
Trim39-201ENSMUST00000042717 Laptm4bQ91XQ6 227 aa8.34□□□□□ -1.07
Trim39-201ENSMUST00000042717 Zswim1Q9CWV7 455 aaKnown RBP8.34□□□□□ -1.07
Trim39-201ENSMUST00000042717 Ndufs4Q9CXZ1 175 aa8.34□□□□□ -1.07
Trim39-201ENSMUST00000042717 Wars2Q9CYK1 360 aa8.34□□□□□ -1.07
Trim39-201ENSMUST00000042717 C1qtnf2Q9D8U4 294 aa8.34□□□□□ -1.07
Trim39-201ENSMUST00000042717 Fam96aQ9DCL2 160 aa8.34□□□□□ -1.07
Trim39-201ENSMUST00000042717 Sphk2Q9JIA7 617 aa8.34□□□□□ -1.07
Trim39-201ENSMUST00000042717 FastkQ9JIX9 511 aa8.34□□□□□ -1.07
Trim39-201ENSMUST00000042717 Tet2Q4JK59 1912 aaKnown RBP8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 TomtA1Y9I9 258 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Gm5938A2AEN9 163 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Gm15821A6X8J8 139 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Slc25a54B1AUS6 473 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Zfp40B1B1D3 796 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Lipo4D3Z608 396 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Crisp4E9PVG4 293 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Gm340F6RGI3 1242 aa8.33□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 40.4 ms