RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Igkv12-46A0A140T8P6 115 aa12.97□□□□□ -0.33
Nup88-201ENSMUST00000035283 Gm4450E9Q007 373 aa12.97□□□□□ -0.33
Nup88-201ENSMUST00000035283 Gm2888K7N746 267 aa12.97□□□□□ -0.33
Nup88-201ENSMUST00000035283 Stk16O88697 305 aa12.97□□□□□ -0.33
Nup88-201ENSMUST00000035283 Surf2P09926 257 aaKnown RBP12.97□□□□□ -0.33
Nup88-201ENSMUST00000035283 Rack1P68040 317 aaKnown RBP12.97□□□□□ -0.33
Nup88-201ENSMUST00000035283 Dab1P97318 588 aa12.97□□□□□ -0.33
Nup88-201ENSMUST00000035283 InhaQ04997 366 aa12.97□□□□□ -0.33
Nup88-201ENSMUST00000035283 Pyroxd2Q3U4I7 581 aa12.97□□□□□ -0.33
Nup88-201ENSMUST00000035283 Nxf3Q4ZGD9 553 aa12.97□□□□□ -0.33
Nup88-201ENSMUST00000035283 GcgrQ61606 485 aa12.97□□□□□ -0.33
Nup88-201ENSMUST00000035283 Hsd3b4Q61767 373 aa12.97□□□□□ -0.33
Nup88-201ENSMUST00000035283 Zp1Q62005 623 aa12.97□□□□□ -0.33
Nup88-201ENSMUST00000035283 OmpQ64288 163 aa12.97□□□□□ -0.33
Nup88-201ENSMUST00000035283 Ube2r2Q6ZWZ2 238 aa12.97□□□□□ -0.33
Nup88-201ENSMUST00000035283 Tmem184bQ8BG09 407 aa12.97□□□□□ -0.33
Nup88-201ENSMUST00000035283 Csgalnact1Q8BJQ9 530 aa12.97□□□□□ -0.33
Nup88-201ENSMUST00000035283 Mblac1Q8BWY4 260 aa12.97□□□□□ -0.33
Nup88-201ENSMUST00000035283 4931406P16RikQ8C5X1 1059 aa12.97□□□□□ -0.33
Nup88-201ENSMUST00000035283 Sirt4Q8R216 333 aa12.97□□□□□ -0.33
Nup88-201ENSMUST00000035283 Cadm1Q8R5M8 456 aaKnown RBP12.97□□□□□ -0.33
Nup88-201ENSMUST00000035283 Acsl6Q91WC3 697 aa12.97□□□□□ -0.33
Nup88-201ENSMUST00000035283 Lrrc49Q91YK0 686 aa12.97□□□□□ -0.33
Nup88-201ENSMUST00000035283 MtapQ9CQ65 283 aa12.97□□□□□ -0.33
Nup88-201ENSMUST00000035283 Smurf1Q9CUN6 731 aa12.97□□□□□ -0.33
Nup88-201ENSMUST00000035283 2310003L06RikQ9CV82 495 aa12.97□□□□□ -0.33
Nup88-201ENSMUST00000035283 Bcl7aQ9CXE2 210 aa12.97□□□□□ -0.33
Nup88-201ENSMUST00000035283 Twist2Q9D030 160 aa12.97□□□□□ -0.33
Nup88-201ENSMUST00000035283 Tpk1Q9R0M5 243 aa12.97□□□□□ -0.33
Nup88-201ENSMUST00000035283 Gm16432A0A0A6YXX9 775 aa12.97□□□□□ -0.33
Nup88-201ENSMUST00000035283 Ect2lA0A140LIP2 953 aa12.97□□□□□ -0.33
Nup88-201ENSMUST00000035283 Olfr74A2BHP6 318 aa12.97□□□□□ -0.33
Nup88-201ENSMUST00000035283 Ttll2A4Q9E4 540 aa12.97□□□□□ -0.33
Nup88-201ENSMUST00000035283 Crisp4E9PVG4 293 aa12.97□□□□□ -0.33
Nup88-201ENSMUST00000035283 Gm16494E9Q2Z4 87 aa12.97□□□□□ -0.33
Nup88-201ENSMUST00000035283 HpnO35453 436 aa12.97□□□□□ -0.33
Nup88-201ENSMUST00000035283 Suv39h1O54864 412 aa12.97□□□□□ -0.33
Nup88-201ENSMUST00000035283 Nanos3P60324 178 aa12.97□□□□□ -0.33
Nup88-201ENSMUST00000035283 Nr1h4Q60641 488 aa12.97□□□□□ -0.33
Nup88-201ENSMUST00000035283 Rftn1Q6A0D4 554 aa12.97□□□□□ -0.33
Nup88-201ENSMUST00000035283 LsampQ8BLK3 341 aa12.97□□□□□ -0.33
Nup88-201ENSMUST00000035283 Map2k7Q8CE90 535 aa12.97□□□□□ -0.33
Nup88-201ENSMUST00000035283 Pdlim5Q8CI51 591 aaKnown RBP12.97□□□□□ -0.33
Nup88-201ENSMUST00000035283 Adgrg1Q8K209 687 aa12.97□□□□□ -0.33
Nup88-201ENSMUST00000035283 Ces2aQ8QZR3 558 aa12.97□□□□□ -0.33
Nup88-201ENSMUST00000035283 Igsf8Q8R366 611 aa12.97□□□□□ -0.33
Nup88-201ENSMUST00000035283 SarafQ8R3Q0 334 aa12.97□□□□□ -0.33
Nup88-201ENSMUST00000035283 Olfr697Q8VFM4 317 aa12.97□□□□□ -0.33
Nup88-201ENSMUST00000035283 Recql5Q8VID5 982 aa12.97□□□□□ -0.33
Nup88-201ENSMUST00000035283 NrarpQ91ZA8 114 aa12.97□□□□□ -0.33
Nup88-201ENSMUST00000035283 Slc25a37Q920G8 338 aa12.97□□□□□ -0.33
Nup88-201ENSMUST00000035283 Rpl17Q9CPR4 184 aaKnown RBP12.97□□□□□ -0.33
Nup88-201ENSMUST00000035283 Ddx28Q9CWT6 540 aaKnown RBP12.97□□□□□ -0.33
Nup88-201ENSMUST00000035283 Serpinb1aQ9D154 379 aa12.97□□□□□ -0.33
Nup88-201ENSMUST00000035283 Ropn1lQ9EQ00 218 aa12.97□□□□□ -0.33
Nup88-201ENSMUST00000035283 GabrqQ9JLF1 638 aa12.97□□□□□ -0.33
Nup88-201ENSMUST00000035283 Gm42715A0A087WP63 3095 aaKnown RBP12.97□□□□□ -0.33
Nup88-201ENSMUST00000035283 Olfr1123A2AT85 323 aa12.96□□□□□ -0.33
Nup88-201ENSMUST00000035283 Gm4969D3YZT1 566 aa12.96□□□□□ -0.33
Nup88-201ENSMUST00000035283 Gm5478D3Z6R0 159 aa12.96□□□□□ -0.33
Nup88-201ENSMUST00000035283 4930579F01RikE9Q3L6 325 aa12.96□□□□□ -0.33
Nup88-201ENSMUST00000035283 Gm8879F6R3J9 157 aa12.96□□□□□ -0.33
Nup88-201ENSMUST00000035283 Gm8922F6XVS9 199 aa12.96□□□□□ -0.33
Nup88-201ENSMUST00000035283 Scamp3O35609 349 aa12.96□□□□□ -0.33
Nup88-201ENSMUST00000035283 Tulp3O88413 460 aa12.96□□□□□ -0.33
Nup88-201ENSMUST00000035283 Gnrh1P13562 90 aa12.96□□□□□ -0.33
Nup88-201ENSMUST00000035283 Ntsr2P70310 416 aa12.96□□□□□ -0.33
Nup88-201ENSMUST00000035283 ErgP81270 486 aa12.96□□□□□ -0.33
Nup88-201ENSMUST00000035283 Prelid2Q0VBB0 177 aa12.96□□□□□ -0.33
Nup88-201ENSMUST00000035283 Med22Q62276 200 aa12.96□□□□□ -0.33
Nup88-201ENSMUST00000035283 Sqstm1Q64337 442 aaKnown RBP12.96□□□□□ -0.33
Nup88-201ENSMUST00000035283 CilpQ66K08 1184 aa12.96□□□□□ -0.33
Nup88-201ENSMUST00000035283 Shkbp1Q6P7W2 704 aa12.96□□□□□ -0.33
Nup88-201ENSMUST00000035283 Defb14Q7TNV9 67 aa12.96□□□□□ -0.33
Nup88-201ENSMUST00000035283 Znf516Q7TSH3 1157 aa12.96□□□□□ -0.33
Nup88-201ENSMUST00000035283 F12Q80YC5 597 aa12.96□□□□□ -0.33
Nup88-201ENSMUST00000035283 Slco4c1Q8BGD4 722 aa12.96□□□□□ -0.33
Nup88-201ENSMUST00000035283 SynbQ8BI41 618 aa12.96□□□□□ -0.33
Nup88-201ENSMUST00000035283 Cfap20Q8BTU1 193 aa12.96□□□□□ -0.33
Nup88-201ENSMUST00000035283 Zhx3Q8C0Q2 951 aa12.96□□□□□ -0.33
Nup88-201ENSMUST00000035283 Fam110bQ8C739 366 aa12.96□□□□□ -0.33
Nup88-201ENSMUST00000035283 Pcyox1lQ8C7K6 495 aa12.96□□□□□ -0.33
Nup88-201ENSMUST00000035283 Dleu7Q8CHZ8 209 aa12.96□□□□□ -0.33
Nup88-201ENSMUST00000035283 Ift80Q8K057 777 aa12.96□□□□□ -0.33
Nup88-201ENSMUST00000035283 ZwilchQ8R060 589 aa12.96□□□□□ -0.33
Nup88-201ENSMUST00000035283 FggQ8VCM7 436 aa12.96□□□□□ -0.33
Nup88-201ENSMUST00000035283 Olfr659Q8VGV6 322 aa12.96□□□□□ -0.33
Nup88-201ENSMUST00000035283 Asb17Q8VHP9 295 aa12.96□□□□□ -0.33
Nup88-201ENSMUST00000035283 Spred1Q924S8 444 aa12.96□□□□□ -0.33
Nup88-201ENSMUST00000035283 Klhl28Q9CR40 571 aa12.96□□□□□ -0.33
Nup88-201ENSMUST00000035283 Gadd45gip1Q9CR59 222 aa12.96□□□□□ -0.33
Nup88-201ENSMUST00000035283 Snx7Q9CY18 387 aa12.96□□□□□ -0.33
Nup88-201ENSMUST00000035283 Atp6ap2Q9CYN9 350 aa12.96□□□□□ -0.33
Nup88-201ENSMUST00000035283 Ift43Q9DA69 206 aa12.96□□□□□ -0.33
Nup88-201ENSMUST00000035283 Itga10E9Q6R1 1167 aa12.96□□□□□ -0.34
Nup88-201ENSMUST00000035283 Gm21915J3QPM7 133 aa12.96□□□□□ -0.34
Nup88-201ENSMUST00000035283 Foxd2O35392 492 aa12.96□□□□□ -0.34
Nup88-201ENSMUST00000035283 Cxcr3O88410 367 aa12.96□□□□□ -0.34
Nup88-201ENSMUST00000035283 Fabp3P11404 133 aa12.96□□□□□ -0.34
Nup88-201ENSMUST00000035283 Man2a1P27046 1150 aa12.96□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 30.2 ms