RNA–Protein interactions for RNA: YHR004C

NEM1, Transcript of Probable catalytic subunit of Nem1p-Spo7p phosphatase holoenzyme, yeastyeast

Gene NEM1, Length 1,341 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NEM1YHR004C IOC3P43596 787 aa6.97□□□□□ -1.29
NEM1YHR004C PMA1P05030 918 aaKnown RBP6.96□□□□□ -1.3
NEM1YHR004C MCM7P38132 845 aa6.96□□□□□ -1.3
NEM1YHR004C GCV2P49095 1034 aa6.96□□□□□ -1.3
NEM1YHR004C PHO23P50947 330 aa6.96□□□□□ -1.3
NEM1YHR004C SLI1P53304 468 aa6.96□□□□□ -1.3
NEM1YHR004C PEP7P32609 515 aa6.95□□□□□ -1.3
NEM1YHR004C RPL11AP0C0W9 174 aaKnown RBP6.94□□□□□ -1.3
NEM1YHR004C MXR1P40029 184 aa6.94□□□□□ -1.3
NEM1YHR004C RTT10Q08924 1013 aa6.94□□□□□ -1.3
NEM1YHR004C RPL11BQ3E757 174 aaPredicted RBP6.94□□□□□ -1.3
NEM1YHR004C BI4P03879 638 aa6.93□□□□□ -1.3
NEM1YHR004C PLB1P39105 664 aa6.93□□□□□ -1.3
NEM1YHR004C MND2P40577 368 aa6.93□□□□□ -1.3
NEM1YHR004C SEN54Q02825 467 aaPredicted RBP6.93□□□□□ -1.3
NEM1YHR004C TIF35Q04067 274 aaKnown RBP6.93□□□□□ -1.3
NEM1YHR004C TMA46Q12000 345 aaKnown RBP6.93□□□□□ -1.3
NEM1YHR004C RER2P35196 286 aa6.92□□□□□ -1.3
NEM1YHR004C DEF1P35732 738 aaKnown RBP6.92□□□□□ -1.3
NEM1YHR004C POA1P38218 177 aa6.92□□□□□ -1.3
NEM1YHR004C MET12P46151 657 aa6.91□□□□□ -1.3
NEM1YHR004C POL32P47110 350 aa6.91□□□□□ -1.3
NEM1YHR004C ESF1Q06344 628 aaKnown RBP6.91□□□□□ -1.3
NEM1YHR004C SPP382Q06411 708 aaPredicted RBP6.91□□□□□ -1.3
NEM1YHR004C TPO1Q07824 586 aa6.91□□□□□ -1.3
NEM1YHR004C ZRG8P40021 1076 aa6.9□□□□□ -1.3
NEM1YHR004C HIS5P07172 385 aa6.88□□□□□ -1.31
NEM1YHR004C ENA1P13587 1091 aa6.88□□□□□ -1.31
NEM1YHR004C MCM2P29469 868 aa6.88□□□□□ -1.31
NEM1YHR004C SLA2P33338 968 aa6.88□□□□□ -1.31
NEM1YHR004C YPT53P36019 220 aa6.88□□□□□ -1.31
NEM1YHR004C CHS7P38843 316 aa6.88□□□□□ -1.31
NEM1YHR004C SIP5P40210 489 aaKnown RBP6.88□□□□□ -1.31
NEM1YHR004C HFM1P51979 1187 aa6.88□□□□□ -1.31
NEM1YHR004C ENA2Q01896 1091 aa6.88□□□□□ -1.31
NEM1YHR004C ENA5Q12691 1091 aa6.88□□□□□ -1.31
NEM1YHR004C RAD53P22216 821 aa6.87□□□□□ -1.31
NEM1YHR004C PNT1P38969 423 aa6.87□□□□□ -1.31
NEM1YHR004C MSS4P38994 779 aa6.87□□□□□ -1.31
NEM1YHR004C ADY3Q07732 790 aa6.87□□□□□ -1.31
NEM1YHR004C DBP2P24783 546 aaKnown RBP6.86□□□□□ -1.31
NEM1YHR004C KIN4Q01919 800 aa6.86□□□□□ -1.31
NEM1YHR004C SPR28Q04921 423 aa6.86□□□□□ -1.31
NEM1YHR004C AIM39Q08223 395 aa6.86□□□□□ -1.31
NEM1YHR004C OSW2Q12202 724 aa6.86□□□□□ -1.31
NEM1YHR004C YJR107WP47145 328 aa6.85□□□□□ -1.31
NEM1YHR004C CHA4P43634 648 aa6.84□□□□□ -1.31
NEM1YHR004C PFK1P16861 987 aaKnown RBP6.83□□□□□ -1.32
NEM1YHR004C RMD1Q03441 430 aa6.83□□□□□ -1.32
NEM1YHR004C LYP1P32487 611 aa6.82□□□□□ -1.32
NEM1YHR004C YAP1801P38856 637 aa6.81□□□□□ -1.32
NEM1YHR004C SNF7P39929 240 aaKnown RBP6.81□□□□□ -1.32
NEM1YHR004C PSP2P50109 593 aaKnown RBP6.81□□□□□ -1.32
NEM1YHR004C EXG2P52911 562 aa6.81□□□□□ -1.32
NEM1YHR004C ATE1P16639 503 aa6.8□□□□□ -1.32
NEM1YHR004C YGR012WP53206 393 aa6.8□□□□□ -1.32
NEM1YHR004C YLL058WQ12198 575 aa6.8□□□□□ -1.32
NEM1YHR004C RKM4Q12504 494 aa6.8□□□□□ -1.32
NEM1YHR004C HRR25P29295 494 aaKnown RBP6.79□□□□□ -1.32
NEM1YHR004C FYV10P40492 516 aa6.79□□□□□ -1.32
NEM1YHR004C MTC3P53077 123 aa6.79□□□□□ -1.32
NEM1YHR004C TRP2P00899 507 aaKnown RBP6.78□□□□□ -1.32
NEM1YHR004C CCC2P38995 1004 aa6.78□□□□□ -1.32
NEM1YHR004C XYL2Q07993 356 aa6.78□□□□□ -1.32
NEM1YHR004C ATG19P35193 415 aa6.77□□□□□ -1.32
NEM1YHR004C OAR1P35731 278 aa6.77□□□□□ -1.32
NEM1YHR004C TYW3P53177 273 aa6.77□□□□□ -1.32
NEM1YHR004C PPM2Q08282 695 aa6.77□□□□□ -1.32
NEM1YHR004C INO1P11986 533 aa6.76□□□□□ -1.33
NEM1YHR004C ENB1Q08299 606 aa6.76□□□□□ -1.33
NEM1YHR004C KCS1Q12494 1050 aa6.76□□□□□ -1.33
NEM1YHR004C HSF1P10961 833 aa6.76□□□□□ -1.33
NEM1YHR004C YKL107WP34251 309 aa6.76□□□□□ -1.33
NEM1YHR004C UBA2P52488 636 aa6.76□□□□□ -1.33
NEM1YHR004C NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.76□□□□□ -1.33not detected
NEM1YHR004C SPE1P08432 466 aa6.75□□□□□ -1.33
NEM1YHR004C MOH1P38191 138 aa6.75□□□□□ -1.33
NEM1YHR004C YGL176CP46945 554 aa6.75□□□□□ -1.33
NEM1YHR004C CDA1Q06702 301 aa6.75□□□□□ -1.33
NEM1YHR004C MDM38Q08179 573 aa6.75□□□□□ -1.33
NEM1YHR004C HEM3P28789 327 aa6.74□□□□□ -1.33
NEM1YHR004C ASF1P32447 279 aa6.74□□□□□ -1.33
NEM1YHR004C ECM21P38167 1117 aaKnown RBP6.74□□□□□ -1.33
NEM1YHR004C YML122CQ03207 126 aa6.74□□□□□ -1.33
NEM1YHR004C SPO20Q04359 397 aa6.74□□□□□ -1.33
NEM1YHR004C CDC34P14682 295 aa6.73□□□□□ -1.33
NEM1YHR004C PET112P33893 541 aa6.73□□□□□ -1.33
NEM1YHR004C MOT2P34909 587 aaKnown RBP6.73□□□□□ -1.33
NEM1YHR004C NPC2Q12408 173 aa6.73□□□□□ -1.33
NEM1YHR004C FUN30P31380 1131 aa6.72□□□□□ -1.33
NEM1YHR004C SRT1Q03175 343 aa6.72□□□□□ -1.33
NEM1YHR004C RRP15Q06511 250 aaPredicted RBP6.72□□□□□ -1.33
NEM1YHR004C GUP2Q08929 609 aa6.72□□□□□ -1.33
NEM1YHR004C SRP101P32916 621 aa6.71□□□□□ -1.34
NEM1YHR004C URM1P40554 99 aaPredicted RBP6.71□□□□□ -1.34
NEM1YHR004C YPL066WQ12194 479 aa6.71□□□□□ -1.34
NEM1YHR004C DUT1P33317 147 aa6.7□□□□□ -1.34
NEM1YHR004C PIN4P34217 668 aaKnown RBP RIP-Chip data6.7□□□□□ -1.34not detected
NEM1YHR004C MET10P39692 1035 aa6.7□□□□□ -1.34
NEM1YHR004C KRI1P42846 591 aaKnown RBP6.7□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 47.5 ms