RNA–Protein interactions for RNA: ENST00000641923.1

SAMMSON-223, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, human

Gene SAMMSON, Length 1,213 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMMSON-223	ENST00000641923	CDCA7L	Q96GN5	454 aa		11.54	□□□□□ -0.56
SAMMSON-223	ENST00000641923	ASAP1	Q9ULH1	1129 aa		11.54	□□□□□ -0.56
SAMMSON-223	ENST00000641923	SENP3-EIF4A1	A0A087X0R7	540 aa		11.53	□□□□□ -0.56
SAMMSON-223	ENST00000641923	GIGYF1	O75420	1035 aa	Predicted RBP	11.53	□□□□□ -0.56
SAMMSON-223	ENST00000641923	SLC39A6	Q13433	755 aa		11.53	□□□□□ -0.56
SAMMSON-223	ENST00000641923	ALDH1L2	Q3SY69	923 aa		11.53	□□□□□ -0.56
SAMMSON-223	ENST00000641923	CCDC30	Q5VVM6	783 aa		11.53	□□□□□ -0.56
SAMMSON-223	ENST00000641923	ERICH6	Q7L0X2	663 aa		11.53	□□□□□ -0.56
SAMMSON-223	ENST00000641923	ZNF496	Q96IT1	587 aa	Predicted RBP	11.53	□□□□□ -0.56
SAMMSON-223	ENST00000641923	STK31	Q9BXU1	1019 aa		11.53	□□□□□ -0.56
SAMMSON-223	ENST00000641923	MIS18A	Q9NYP9	233 aa		11.53	□□□□□ -0.56
SAMMSON-223	ENST00000641923	C5	P01031	1676 aa		11.52	□□□□□ -0.56
SAMMSON-223	ENST00000641923	PTCD1	O75127	700 aa	Known RBP	11.52	□□□□□ -0.57
SAMMSON-223	ENST00000641923	APBA3	O96018	575 aa		11.52	□□□□□ -0.57
SAMMSON-223	ENST00000641923	ATP6V1A	P38606	617 aa		11.52	□□□□□ -0.57
SAMMSON-223	ENST00000641923	EXOSC9	Q06265	439 aa	Known RBP	11.52	□□□□□ -0.57
SAMMSON-223	ENST00000641923	CCNL1	Q9UK58	526 aa	Predicted RBP	11.52	□□□□□ -0.57
SAMMSON-223	ENST00000641923	TAF1L	Q8IZX4	1826 aa		11.51	□□□□□ -0.57
SAMMSON-223	ENST00000641923	HDGFL1	Q5TGJ6	251 aa		11.51	□□□□□ -0.57
SAMMSON-223	ENST00000641923	NPM2	Q86SE8	214 aa	Known RBP	11.51	□□□□□ -0.57
SAMMSON-223	ENST00000641923	COL5A3	P25940	1745 aa	Predicted RBP	11.5	□□□□□ -0.57
SAMMSON-223	ENST00000641923	TJP1	Q07157	1748 aa		11.5	□□□□□ -0.57
SAMMSON-223	ENST00000641923	VAMP4	O75379	141 aa		11.5	□□□□□ -0.57
SAMMSON-223	ENST00000641923	RC3H1	Q5TC82	1133 aa	Known RBP	11.5	□□□□□ -0.57
SAMMSON-223	ENST00000641923	DBF4	Q9UBU7	674 aa	Predicted RBP	11.5	□□□□□ -0.57
SAMMSON-223	ENST00000641923	KIF16B	Q96L93	1317 aa		11.5	□□□□□ -0.57
SAMMSON-223	ENST00000641923	CNTNAP4	Q9C0A0	1308 aa		11.5	□□□□□ -0.57
SAMMSON-223	ENST00000641923	KCNQ3	O43525	872 aa		11.49	□□□□□ -0.57
SAMMSON-223	ENST00000641923	BRPF1	P55201	1214 aa	Predicted RBP	11.49	□□□□□ -0.57
SAMMSON-223	ENST00000641923	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	11.49	□□□□□ -0.57
SAMMSON-223	ENST00000641923	C8orf58	Q8NAV2	365 aa		11.49	□□□□□ -0.57
SAMMSON-223	ENST00000641923	HYPK	Q9NX55	129 aa		11.49	□□□□□ -0.57
SAMMSON-223	ENST00000641923	MS4A1	P11836	297 aa		11.48	□□□□□ -0.57
SAMMSON-223	ENST00000641923	TXNRD1	Q16881	649 aa		11.48	□□□□□ -0.57
SAMMSON-223	ENST00000641923	DDX21	Q9NR30	783 aa	Known RBP eCLIP	11.48	□□□□□ -0.57
SAMMSON-223	ENST00000641923	RREB1	Q92766	1687 aa		11.48	□□□□□ -0.57
SAMMSON-223	ENST00000641923		A0A087WZG4	1122 aa		11.47	□□□□□ -0.57
SAMMSON-223	ENST00000641923	RGL2	O15211	777 aa		11.47	□□□□□ -0.57
SAMMSON-223	ENST00000641923	IPO8	O15397	1037 aa	Known RBP	11.47	□□□□□ -0.57
SAMMSON-223	ENST00000641923	CYP19A1	P11511	503 aa	Predicted RBP	11.47	□□□□□ -0.57
SAMMSON-223	ENST00000641923	IL6ST	P40189	918 aa	Predicted RBP	11.47	□□□□□ -0.57
SAMMSON-223	ENST00000641923	DNAJC10	Q8IXB1	793 aa		11.47	□□□□□ -0.57
SAMMSON-223	ENST00000641923	FLAD1	Q8NFF5	587 aa		11.47	□□□□□ -0.57
SAMMSON-223	ENST00000641923	CCDC87	Q9NVE4	849 aa		11.47	□□□□□ -0.57
SAMMSON-223	ENST00000641923	RCAN3	Q9UKA8	241 aa		11.47	□□□□□ -0.57
SAMMSON-223	ENST00000641923	C4B	P0C0L5	1744 aa		11.46	□□□□□ -0.57
SAMMSON-223	ENST00000641923	PTPRC	P08575	1304 aa		11.46	□□□□□ -0.57
SAMMSON-223	ENST00000641923	ELL2	O00472	640 aa	Predicted RBP	11.46	□□□□□ -0.57
SAMMSON-223	ENST00000641923	DDX58	O95786	925 aa	Known RBP	11.46	□□□□□ -0.57
SAMMSON-223	ENST00000641923	EIF2S2	P20042	333 aa	Known RBP	11.46	□□□□□ -0.57
SAMMSON-223	ENST00000641923	RARS	P54136	660 aa	Known RBP	11.46	□□□□□ -0.57
SAMMSON-223	ENST00000641923	CHRDL2	Q6WN34	429 aa		11.46	□□□□□ -0.57
SAMMSON-223	ENST00000641923	TSPYL6	Q8N831	410 aa		11.46	□□□□□ -0.57
SAMMSON-223	ENST00000641923	AK7	Q96M32	723 aa		11.46	□□□□□ -0.57
SAMMSON-223	ENST00000641923	CAMKK2	Q96RR4	588 aa		11.46	□□□□□ -0.57
SAMMSON-223	ENST00000641923	SMC4	Q9NTJ3	1288 aa		11.46	□□□□□ -0.57
SAMMSON-223	ENST00000641923	USP16	Q9Y5T5	823 aa		11.46	□□□□□ -0.57
SAMMSON-223	ENST00000641923	CRKL	P46109	303 aa	Known RBP	11.45	□□□□□ -0.58
SAMMSON-223	ENST00000641923	NBPF14	Q5TI25	921 aa		11.45	□□□□□ -0.58
SAMMSON-223	ENST00000641923	PTF1A	Q7RTS3	328 aa		11.45	□□□□□ -0.58
SAMMSON-223	ENST00000641923	ARHGAP45	Q92619	1136 aa		11.45	□□□□□ -0.58
SAMMSON-223	ENST00000641923	UPF1	Q92900	1129 aa	Known RBP eCLIP	11.45	□□□□□ -0.58
SAMMSON-223	ENST00000641923	SLC4A9	Q96Q91	983 aa		11.45	□□□□□ -0.58
SAMMSON-223	ENST00000641923	BCL11A	Q9H165	835 aa		11.45	□□□□□ -0.58
SAMMSON-223	ENST00000641923	EP400	Q96L91	3159 aa		11.45	□□□□□ -0.58
SAMMSON-223	ENST00000641923	MYH14	Q7Z406	1995 aa	Known RBP	11.45	□□□□□ -0.58
SAMMSON-223	ENST00000641923	QSER1	Q2KHR3	1735 aa		11.44	□□□□□ -0.58
SAMMSON-223	ENST00000641923	RPS6KA4	O75676	772 aa		11.44	□□□□□ -0.58
SAMMSON-223	ENST00000641923	ITPK1	Q13572	414 aa		11.44	□□□□□ -0.58
SAMMSON-223	ENST00000641923	KRT24	Q2M2I5	525 aa		11.44	□□□□□ -0.58
SAMMSON-223	ENST00000641923	AKT1S1	Q96B36	256 aa		11.44	□□□□□ -0.58
SAMMSON-223	ENST00000641923	RTCB	Q9Y3I0	505 aa	Known RBP	11.44	□□□□□ -0.58
SAMMSON-223	ENST00000641923	UBR3	Q6ZT12	1888 aa		11.43	□□□□□ -0.58
SAMMSON-223	ENST00000641923	SSFA2	P28290	1259 aa		11.43	□□□□□ -0.58
SAMMSON-223	ENST00000641923	EN1	Q05925	392 aa	Predicted RBP	11.43	□□□□□ -0.58
SAMMSON-223	ENST00000641923	LINC00116	Q8NCU8	138 aa		11.43	□□□□□ -0.58
SAMMSON-223	ENST00000641923	SSH1	Q8WYL5	1049 aa		11.43	□□□□□ -0.58
SAMMSON-223	ENST00000641923	API5	Q9BZZ5	524 aa	Known RBP	11.43	□□□□□ -0.58
SAMMSON-223	ENST00000641923	STK32B	Q9NY57	414 aa		11.43	□□□□□ -0.58
SAMMSON-223	ENST00000641923	CHPF2	Q9P2E5	772 aa		11.43	□□□□□ -0.58
SAMMSON-223	ENST00000641923	NUP188	Q5SRE5	1749 aa		11.43	□□□□□ -0.58
SAMMSON-223	ENST00000641923	CANX	P27824	592 aa	Known RBP	11.42	□□□□□ -0.58
SAMMSON-223	ENST00000641923	EIF5	P55010	431 aa	Known RBP	11.42	□□□□□ -0.58
SAMMSON-223	ENST00000641923	ZKSCAN2	Q63HK3	967 aa		11.42	□□□□□ -0.58
SAMMSON-223	ENST00000641923	KIF6	Q6ZMV9	814 aa		11.42	□□□□□ -0.58
SAMMSON-223	ENST00000641923	MRPL50	Q8N5N7	158 aa	Known RBP	11.42	□□□□□ -0.58
SAMMSON-223	ENST00000641923	ZNF652	Q9Y2D9	606 aa		11.42	□□□□□ -0.58
SAMMSON-223	ENST00000641923	COL15A1	P39059	1388 aa		11.41	□□□□□ -0.58
SAMMSON-223	ENST00000641923	PXDNL	A1KZ92	1463 aa		11.41	□□□□□ -0.58
SAMMSON-223	ENST00000641923	PRAMEF22	A3QJZ6	481 aa		11.41	□□□□□ -0.58
SAMMSON-223	ENST00000641923	ERVV-1	B6SEH8	477 aa		11.41	□□□□□ -0.58
SAMMSON-223	ENST00000641923	GNPAT	O15228	680 aa		11.41	□□□□□ -0.58
SAMMSON-223	ENST00000641923	A1BG	P04217	495 aa		11.41	□□□□□ -0.58
SAMMSON-223	ENST00000641923	FLII	Q13045	1269 aa		11.41	□□□□□ -0.58
SAMMSON-223	ENST00000641923	PDIA6	Q15084	440 aa		11.41	□□□□□ -0.58
SAMMSON-223	ENST00000641923	EZH2	Q15910	746 aa	Known RBP	11.41	□□□□□ -0.58
SAMMSON-223	ENST00000641923	HSP90AB3P	Q58FF7	597 aa		11.41	□□□□□ -0.58
SAMMSON-223	ENST00000641923	INTS5	Q6P9B9	1019 aa	Known RBP	11.41	□□□□□ -0.58
SAMMSON-223	ENST00000641923	PROM2	Q8N271	834 aa		11.41	□□□□□ -0.58
SAMMSON-223	ENST00000641923	CHMP4B	Q9H444	224 aa	Known RBP	11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms