RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 TRAPPC3LQ5T215 181 aa10.21□□□□□ -0.77
PHGDH-225ENST00000641720 IFNL2Q8IZJ0 200 aa10.21□□□□□ -0.77
PHGDH-225ENST00000641720 POLKQ9UBT6 870 aa10.21□□□□□ -0.77
PHGDH-225ENST00000641720 SPG7Q9UQ90 795 aa10.21□□□□□ -0.77
PHGDH-225ENST00000641720 PDE4DIPQ5VU43 2346 aa10.21□□□□□ -0.78
PHGDH-225ENST00000641720 ERVV-2B6SEH9 535 aa10.2□□□□□ -0.78
PHGDH-225ENST00000641720 EIF4A2Q14240 407 aaKnown RBP10.2□□□□□ -0.78
PHGDH-225ENST00000641720 SMC1BQ8NDV3 1235 aa10.2□□□□□ -0.78
PHGDH-225ENST00000641720 KDM2BQ8NHM5 1336 aa10.2□□□□□ -0.78
PHGDH-225ENST00000641720 POLR3GLQ9BT43 218 aa10.2□□□□□ -0.78
PHGDH-225ENST00000641720 PIM2Q9P1W9 311 aa10.2□□□□□ -0.78
PHGDH-225ENST00000641720 NFKBIEO00221 500 aa10.19□□□□□ -0.78
PHGDH-225ENST00000641720 CDCA8Q53HL2 280 aa10.19□□□□□ -0.78
PHGDH-225ENST00000641720 INTS5Q6P9B9 1019 aaKnown RBP10.19□□□□□ -0.78
PHGDH-225ENST00000641720 GLTPD2A6NH11 291 aa10.18□□□□□ -0.78
PHGDH-225ENST00000641720 CRKLP46109 303 aaKnown RBP10.18□□□□□ -0.78
PHGDH-225ENST00000641720 DALRD3Q5D0E6 543 aaKnown RBP10.18□□□□□ -0.78
PHGDH-225ENST00000641720 BCL2L12Q9HB09 334 aa10.18□□□□□ -0.78
PHGDH-225ENST00000641720 PARP3Q9Y6F1 533 aa10.18□□□□□ -0.78
PHGDH-225ENST00000641720 LTBP1Q14766 1721 aa10.18□□□□□ -0.78
PHGDH-225ENST00000641720 SOS1Q07889 1333 aaPredicted RBP10.17□□□□□ -0.78
PHGDH-225ENST00000641720 RFC4P35249 363 aa10.16□□□□□ -0.78
PHGDH-225ENST00000641720 PASKQ96RG2 1323 aa10.15□□□□□ -0.78
PHGDH-225ENST00000641720 POTEIP0CG38 1075 aa10.15□□□□□ -0.78
PHGDH-225ENST00000641720 POTEJP0CG39 1038 aa10.15□□□□□ -0.78
PHGDH-225ENST00000641720 C16orf71Q8IYS4 520 aaPredicted RBP10.15□□□□□ -0.78
PHGDH-225ENST00000641720 RBM42Q9BTD8 480 aaKnown RBP10.15□□□□□ -0.78
PHGDH-225ENST00000641720 FOXN1O15353 648 aa10.14□□□□□ -0.79
PHGDH-225ENST00000641720 VEGFAP15692 232 aaPredicted RBP10.14□□□□□ -0.79
PHGDH-225ENST00000641720 LMNB1P20700 586 aa10.14□□□□□ -0.79
PHGDH-225ENST00000641720 NFIXQ14938 502 aa10.14□□□□□ -0.79
PHGDH-225ENST00000641720 SNED1Q8TER0 1413 aa10.14□□□□□ -0.79
PHGDH-225ENST00000641720 CASP8AP2Q9UKL3 1982 aa10.14□□□□□ -0.79
PHGDH-225ENST00000641720 COL15A1P39059 1388 aa10.14□□□□□ -0.79
PHGDH-225ENST00000641720 CNTNAP1P78357 1384 aa10.14□□□□□ -0.79
PHGDH-225ENST00000641720 AEBP1Q8IUX7 1158 aa10.13□□□□□ -0.79
PHGDH-225ENST00000641720 CYP19A1P11511 503 aaPredicted RBP10.12□□□□□ -0.79
PHGDH-225ENST00000641720 USPL1Q5W0Q7 1092 aa10.12□□□□□ -0.79
PHGDH-225ENST00000641720 DNAJC10Q8IXB1 793 aa10.12□□□□□ -0.79
PHGDH-225ENST00000641720 PANK3Q9H999 370 aa10.12□□□□□ -0.79
PHGDH-225ENST00000641720 COL4A5P29400 1685 aa10.12□□□□□ -0.79
PHGDH-225ENST00000641720 NUP98P52948 1817 aa10.12□□□□□ -0.79
PHGDH-225ENST00000641720 LTBP3Q9NS15 1303 aa10.11□□□□□ -0.79
PHGDH-225ENST00000641720 PTCD1O75127 700 aaKnown RBP10.11□□□□□ -0.79
PHGDH-225ENST00000641720 ZNF530Q6P9A1 599 aaPredicted RBP10.11□□□□□ -0.79
PHGDH-225ENST00000641720 NFATC2IPQ8NCF5 419 aa10.11□□□□□ -0.79
PHGDH-225ENST00000641720 PRDM10Q9NQV6 1147 aa10.11□□□□□ -0.79
PHGDH-225ENST00000641720 CREBZFQ9NS37 354 aa10.11□□□□□ -0.79
PHGDH-225ENST00000641720 NARFQ9UHQ1 456 aa10.11□□□□□ -0.79
PHGDH-225ENST00000641720 PPM1GO15355 546 aaPredicted RBP10.1□□□□□ -0.79
PHGDH-225ENST00000641720 HSP90AB1P08238 724 aaKnown RBP10.1□□□□□ -0.79
PHGDH-225ENST00000641720 ZBTB1Q9Y2K1 713 aa10.1□□□□□ -0.79
PHGDH-225ENST00000641720 LAMB4A4D0S4 1761 aa10.09□□□□□ -0.79
PHGDH-225ENST00000641720 CABP4P57796 275 aa10.09□□□□□ -0.79
PHGDH-225ENST00000641720 TTLL6Q8N841 843 aa10.09□□□□□ -0.79
PHGDH-225ENST00000641720 MKRN1Q9UHC7 482 aaKnown RBP10.09□□□□□ -0.79
PHGDH-225ENST00000641720 POLR2AP24928 1970 aaKnown RBP10.08□□□□□ -0.8
PHGDH-225ENST00000641720 ITGBL1O95965 494 aaPredicted RBP10.08□□□□□ -0.8
PHGDH-225ENST00000641720 SERPINB2P05120 415 aa10.08□□□□□ -0.8
PHGDH-225ENST00000641720 PLEKHO1Q53GL0 409 aaPredicted RBP10.08□□□□□ -0.8
PHGDH-225ENST00000641720 LAMB2P55268 1798 aa10.08□□□□□ -0.8
PHGDH-225ENST00000641720 COL3A1P02461 1466 aaPredicted RBP10.07□□□□□ -0.8
PHGDH-225ENST00000641720 ZNF316A6NFI3 1004 aaPredicted RBP10.07□□□□□ -0.8
PHGDH-225ENST00000641720 AMOTQ4VCS5 1084 aa10.07□□□□□ -0.8
PHGDH-225ENST00000641720 CHADLQ6NUI6 762 aa10.07□□□□□ -0.8
PHGDH-225ENST00000641720 L3MBTL3Q96JM7 780 aaPredicted RBP10.07□□□□□ -0.8
PHGDH-225ENST00000641720 SLC52A2Q9HAB3 445 aa10.07□□□□□ -0.8
PHGDH-225ENST00000641720 WBP1LQ9NX94 342 aa10.07□□□□□ -0.8
PHGDH-225ENST00000641720 DLG5Q8TDM6 1919 aa10.07□□□□□ -0.8
PHGDH-225ENST00000641720 PER1O15534 1290 aaPredicted RBP10.06□□□□□ -0.8
PHGDH-225ENST00000641720 IL13P35225 146 aa10.06□□□□□ -0.8
PHGDH-225ENST00000641720 VEGFBP49765 207 aa10.06□□□□□ -0.8
PHGDH-225ENST00000641720 MTHFSP49914 203 aa10.06□□□□□ -0.8
PHGDH-225ENST00000641720 EIF5P55010 431 aaKnown RBP10.06□□□□□ -0.8
PHGDH-225ENST00000641720 AMER1Q5JTC6 1135 aaPredicted RBP10.06□□□□□ -0.8
PHGDH-225ENST00000641720 C2CD5Q86YS7 1000 aa10.06□□□□□ -0.8
PHGDH-225ENST00000641720 C7orf43Q8WVR3 580 aa10.06□□□□□ -0.8
PHGDH-225ENST00000641720 LGR6Q9HBX8 967 aa10.06□□□□□ -0.8
PHGDH-225ENST00000641720 DDNO94850 711 aaPredicted RBP10.05□□□□□ -0.8
PHGDH-225ENST00000641720 HSPA8P11142 646 aaKnown RBP10.05□□□□□ -0.8
PHGDH-225ENST00000641720 DDX10Q13206 875 aaKnown RBP10.05□□□□□ -0.8
PHGDH-225ENST00000641720 SLC39A6Q13433 755 aa10.05□□□□□ -0.8
PHGDH-225ENST00000641720 PRR5LQ6MZQ0 368 aa10.05□□□□□ -0.8
PHGDH-225ENST00000641720 RASSF10A6NK89 507 aa10.04□□□□□ -0.8
PHGDH-225ENST00000641720 ZPR1O75312 459 aa10.04□□□□□ -0.8
PHGDH-225ENST00000641720 RGS19P49795 217 aa10.04□□□□□ -0.8
PHGDH-225ENST00000641720 TBC1D9BQ66K14 1250 aa10.04□□□□□ -0.8
PHGDH-225ENST00000641720 TAF1DQ9H5J8 278 aaPredicted RBP10.04□□□□□ -0.8
PHGDH-225ENST00000641720 KNSTRNQ9Y448 316 aa10.04□□□□□ -0.8
PHGDH-225ENST00000641720 KDM3BQ7LBC6 1761 aa10.03□□□□□ -0.8
PHGDH-225ENST00000641720 NPC1L1Q9UHC9 1359 aa10.03□□□□□ -0.8
PHGDH-225ENST00000641720 RNMTO43148 476 aaKnown RBP10.03□□□□□ -0.8
PHGDH-225ENST00000641720 C21orf2O43822 256 aa10.03□□□□□ -0.8
PHGDH-225ENST00000641720 TNNT2P45379 298 aaPredicted RBP10.03□□□□□ -0.8
PHGDH-225ENST00000641720 CTCFP49711 727 aaPredicted RBP10.03□□□□□ -0.8
PHGDH-225ENST00000641720 FAM161AQ3B820 660 aa10.03□□□□□ -0.8
PHGDH-225ENST00000641720 ERFEQ4G0M1 354 aa10.03□□□□□ -0.8
PHGDH-225ENST00000641720 AKAP4Q5JQC9 854 aa10.03□□□□□ -0.8
PHGDH-225ENST00000641720 VSIG10Q8N0Z9 540 aa10.03□□□□□ -0.8
PHGDH-225ENST00000641720 ABHD8Q96I13 439 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms