RNA–Protein interactions for RNA: ENST00000641601.1

SAMMSON-218, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

BASIC

Gene SAMMSON, Length 1,847 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-218ENST00000641601 HOXB7P09629 217 aa12.31□□□□□ -0.44
SAMMSON-218ENST00000641601 PRKCSHP14314 528 aaPredicted RBP12.31□□□□□ -0.44
SAMMSON-218ENST00000641601 TSHZ3Q63HK5 1081 aa12.31□□□□□ -0.44
SAMMSON-218ENST00000641601 SETD1BQ9UPS6 1966 aaKnown RBP12.31□□□□□ -0.44
SAMMSON-218ENST00000641601 PLEKHG5O94827 1062 aa12.3□□□□□ -0.44
SAMMSON-218ENST00000641601 HSPA4P34932 840 aa12.3□□□□□ -0.44
SAMMSON-218ENST00000641601 PRIM1P49642 420 aaKnown RBP12.3□□□□□ -0.44
SAMMSON-218ENST00000641601 TPM2P07951 284 aa12.3□□□□□ -0.44
SAMMSON-218ENST00000641601 HDGFL1Q5TGJ6 251 aa12.3□□□□□ -0.44
SAMMSON-218ENST00000641601 TMEM63CQ9P1W3 806 aa12.3□□□□□ -0.44
SAMMSON-218ENST00000641601 MSNP26038 577 aaKnown RBP12.29□□□□□ -0.44
SAMMSON-218ENST00000641601 ANKLE2Q86XL3 938 aa12.29□□□□□ -0.44
SAMMSON-218ENST00000641601 UNC5CLQ8IV45 518 aa12.29□□□□□ -0.44
SAMMSON-218ENST00000641601 UBE2Q2Q8WVN8 375 aa12.29□□□□□ -0.44
SAMMSON-218ENST00000641601 RBM27Q9P2N5 1060 aaKnown RBP12.29□□□□□ -0.44
SAMMSON-218ENST00000641601 NFAT5O94916 1531 aa12.28□□□□□ -0.44
SAMMSON-218ENST00000641601 USP42Q9H9J4 1324 aaKnown RBP12.28□□□□□ -0.44
SAMMSON-218ENST00000641601 OFD1O75665 1012 aa12.28□□□□□ -0.44
SAMMSON-218ENST00000641601 TERF1P54274 439 aa12.28□□□□□ -0.44
SAMMSON-218ENST00000641601 HSP90AB4PQ58FF6 505 aa12.28□□□□□ -0.44
SAMMSON-218ENST00000641601 NECTIN2Q92692 538 aa12.28□□□□□ -0.44
SAMMSON-218ENST00000641601 SYAP1Q96A49 352 aaPredicted RBP12.28□□□□□ -0.44
SAMMSON-218ENST00000641601 KIF1BPQ96EK5 621 aa12.28□□□□□ -0.44
SAMMSON-218ENST00000641601 ADGRL3Q9HAR2 1447 aa12.28□□□□□ -0.44
SAMMSON-218ENST00000641601 RAD50Q92878 1312 aa12.28□□□□□ -0.44
SAMMSON-218ENST00000641601 WDR33Q9C0J8 1336 aaKnown RBP12.28□□□□□ -0.44
SAMMSON-218ENST00000641601 PPP1R42Q7Z4L9 355 aa12.27□□□□□ -0.44
SAMMSON-218ENST00000641601 PI4K2BQ8TCG2 481 aa12.27□□□□□ -0.44
SAMMSON-218ENST00000641601 RHPN1Q8TCX5 695 aa12.27□□□□□ -0.44
SAMMSON-218ENST00000641601 NOL7Q9UMY1 257 aaKnown RBP12.27□□□□□ -0.44
SAMMSON-218ENST00000641601 SGSM2O43147 1006 aa12.27□□□□□ -0.45
SAMMSON-218ENST00000641601 ZNF500O60304 480 aaPredicted RBP12.27□□□□□ -0.45
SAMMSON-218ENST00000641601 SURF6O75683 361 aaKnown RBP12.27□□□□□ -0.45
SAMMSON-218ENST00000641601 MCM5P33992 734 aa12.27□□□□□ -0.45
SAMMSON-218ENST00000641601 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.27□□□□□ -0.45
SAMMSON-218ENST00000641601 ABTB2Q8N961 1025 aa12.27□□□□□ -0.45
SAMMSON-218ENST00000641601 PHAXQ9H814 394 aaKnown RBP12.27□□□□□ -0.45
SAMMSON-218ENST00000641601 SYCE3A1L190 88 aa12.26□□□□□ -0.45
SAMMSON-218ENST00000641601 RRP9O43818 475 aaKnown RBP12.26□□□□□ -0.45
SAMMSON-218ENST00000641601 EIF4A1P60842 406 aaKnown RBP12.26□□□□□ -0.45
SAMMSON-218ENST00000641601 CNTROBQ8N137 903 aa12.26□□□□□ -0.45
SAMMSON-218ENST00000641601 TMEM87AQ8NBN3 555 aa12.26□□□□□ -0.45
SAMMSON-218ENST00000641601 IP6K1Q92551 441 aa12.26□□□□□ -0.45
SAMMSON-218ENST00000641601 IL1RAPL2Q9NP60 686 aa12.26□□□□□ -0.45
SAMMSON-218ENST00000641601 NSFL1CQ9UNZ2 370 aaKnown RBP12.26□□□□□ -0.45
SAMMSON-218ENST00000641601 OVOS2A0A0G2JMS6 1433 aa12.26□□□□□ -0.45
SAMMSON-218ENST00000641601 TTC41PQ6P2S7 1318 aa12.26□□□□□ -0.45
SAMMSON-218ENST00000641601 PHF14O94880 888 aa12.25□□□□□ -0.45
SAMMSON-218ENST00000641601 BEND3Q5T5X7 828 aa12.25□□□□□ -0.45
SAMMSON-218ENST00000641601 NUTM1Q86Y26 1132 aa12.25□□□□□ -0.45
SAMMSON-218ENST00000641601 KLHL34Q8N239 644 aa12.25□□□□□ -0.45
SAMMSON-218ENST00000641601 SRGAP3O43295 1099 aa12.25□□□□□ -0.45
SAMMSON-218ENST00000641601 MTX1Q13505 466 aa12.25□□□□□ -0.45
SAMMSON-218ENST00000641601 DNAAF4Q8WXU2 420 aa12.25□□□□□ -0.45
SAMMSON-218ENST00000641601 TTC14Q96N46 770 aa12.25□□□□□ -0.45
SAMMSON-218ENST00000641601 UPF3BQ9BZI7 483 aaKnown RBP12.25□□□□□ -0.45
SAMMSON-218ENST00000641601 LSG1Q9H089 658 aaKnown RBP12.25□□□□□ -0.45
SAMMSON-218ENST00000641601 IL25Q9H293 177 aa12.25□□□□□ -0.45
SAMMSON-218ENST00000641601 CHD2O14647 1828 aaKnown RBP12.25□□□□□ -0.45
SAMMSON-218ENST00000641601 NCAPD2Q15021 1401 aa12.25□□□□□ -0.45
SAMMSON-218ENST00000641601 ZNF142P52746 1687 aaPredicted RBP12.24□□□□□ -0.45
SAMMSON-218ENST00000641601 FOXD4L5Q5VV16 416 aaPredicted RBP12.24□□□□□ -0.45
SAMMSON-218ENST00000641601 FOXD4L4Q8WXT5 416 aaPredicted RBP12.24□□□□□ -0.45
SAMMSON-218ENST00000641601 CHAMP1Q96JM3 812 aa12.24□□□□□ -0.45
SAMMSON-218ENST00000641601 TSPY26PQ9H489 355 aa12.24□□□□□ -0.45
SAMMSON-218ENST00000641601 CCDC39Q9UFE4 941 aa12.24□□□□□ -0.45
SAMMSON-218ENST00000641601 SNX14Q9Y5W7 946 aa12.24□□□□□ -0.45
SAMMSON-218ENST00000641601 STRCQ7RTU9 1775 aa12.24□□□□□ -0.45
SAMMSON-218ENST00000641601 RGPD2P0DJD1 1756 aa12.23□□□□□ -0.45
SAMMSON-218ENST00000641601 KCNA6P17658 529 aa12.23□□□□□ -0.45
SAMMSON-218ENST00000641601 NUTM2GQ5VZR2 741 aa12.23□□□□□ -0.45
SAMMSON-218ENST00000641601 LTV1Q96GA3 475 aaPredicted RBP12.23□□□□□ -0.45
SAMMSON-218ENST00000641601 ZKSCAN5Q9Y2L8 839 aa12.23□□□□□ -0.45
SAMMSON-218ENST00000641601 RPAP1Q9BWH6 1393 aaPredicted RBP12.23□□□□□ -0.45
SAMMSON-218ENST00000641601 GLRX3O76003 335 aaKnown RBP12.23□□□□□ -0.45
SAMMSON-218ENST00000641601 NBPF7P0C2Y1 421 aaPredicted RBP12.23□□□□□ -0.45
SAMMSON-218ENST00000641601 KIAA1211Q6ZU35 1233 aa12.23□□□□□ -0.45
SAMMSON-218ENST00000641601 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.23□□□□□ -0.45
SAMMSON-218ENST00000641601 CHPF2Q9P2E5 772 aa12.23□□□□□ -0.45
SAMMSON-218ENST00000641601 HDAC5Q9UQL6 1122 aa12.23□□□□□ -0.45
SAMMSON-218ENST00000641601 ADCY9O60503 1353 aa12.22□□□□□ -0.45
SAMMSON-218ENST00000641601 SIPA1L3O60292 1781 aaPredicted RBP12.22□□□□□ -0.45
SAMMSON-218ENST00000641601 ALDH1L1O75891 902 aa12.22□□□□□ -0.45
SAMMSON-218ENST00000641601 NOL8Q76FK4 1167 aaKnown RBP12.22□□□□□ -0.45
SAMMSON-218ENST00000641601 FAM184AQ8NB25 1140 aa12.22□□□□□ -0.45
SAMMSON-218ENST00000641601 RUFY2Q8WXA3 655 aa12.22□□□□□ -0.45
SAMMSON-218ENST00000641601 PHF8Q9UPP1 1060 aa12.22□□□□□ -0.45
SAMMSON-218ENST00000641601 LIMCH1Q9UPQ0 1083 aa12.22□□□□□ -0.45
SAMMSON-218ENST00000641601 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.22□□□□□ -0.45
SAMMSON-218ENST00000641601 CAMTA1Q9Y6Y1 1673 aa12.22□□□□□ -0.45
SAMMSON-218ENST00000641601 ZNF335Q9H4Z2 1342 aaPredicted RBP12.22□□□□□ -0.45
SAMMSON-218ENST00000641601 PI4KAP2A4QPH2 592 aa12.21□□□□□ -0.45
SAMMSON-218ENST00000641601 LETM1O95202 739 aaPredicted RBP12.21□□□□□ -0.45
SAMMSON-218ENST00000641601 HSP90AA2PQ14568 343 aaPredicted RBP12.21□□□□□ -0.45
SAMMSON-218ENST00000641601 CSPP1Q1MSJ5 1256 aa12.21□□□□□ -0.45
SAMMSON-218ENST00000641601 UVSSAQ2YD98 709 aa12.21□□□□□ -0.45
SAMMSON-218ENST00000641601 AKAP4Q5JQC9 854 aa12.21□□□□□ -0.45
SAMMSON-218ENST00000641601 NBPF6Q5VWK0 638 aa12.21□□□□□ -0.45
SAMMSON-218ENST00000641601 USP48Q86UV5 1035 aa12.21□□□□□ -0.45
SAMMSON-218ENST00000641601 USHBP1Q8N6Y0 703 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms