RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 BRPF1P55201 1214 aaPredicted RBP16.77■□□□□ 0.28
PHGDH-221ENST00000641573 GPBP1L1Q9HC44 474 aaPredicted RBP16.77■□□□□ 0.28
PHGDH-221ENST00000641573 LRRC4BQ9NT99 713 aa16.77■□□□□ 0.28
PHGDH-221ENST00000641573 TFCP2L1Q9NZI6 479 aa16.77■□□□□ 0.28
PHGDH-221ENST00000641573 ADAMTS7Q9UKP4 1686 aa16.77■□□□□ 0.28
PHGDH-221ENST00000641573 ATP10DQ9P241 1426 aa16.77■□□□□ 0.27
PHGDH-221ENST00000641573 KIF16BQ96L93 1317 aa16.76■□□□□ 0.27
PHGDH-221ENST00000641573 HSP90AB1P08238 724 aaKnown RBP16.76■□□□□ 0.27
PHGDH-221ENST00000641573 SLC27A3Q5K4L6 730 aa16.76■□□□□ 0.27
PHGDH-221ENST00000641573 B4GALNT3Q6L9W6 998 aa16.76■□□□□ 0.27
PHGDH-221ENST00000641573 PANK1Q8TE04 598 aa16.76■□□□□ 0.27
PHGDH-221ENST00000641573 AKT1S1Q96B36 256 aa16.76■□□□□ 0.27
PHGDH-221ENST00000641573 NOB1Q9ULX3 412 aaKnown RBP16.76■□□□□ 0.27
PHGDH-221ENST00000641573 KDM6AO15550 1401 aaPredicted RBP16.76■□□□□ 0.27
PHGDH-221ENST00000641573 BTBD11A6QL63 1104 aa16.75■□□□□ 0.27
PHGDH-221ENST00000641573 TCERG1O14776 1098 aaKnown RBP16.75■□□□□ 0.27
PHGDH-221ENST00000641573 IPO8O15397 1037 aaKnown RBP16.75■□□□□ 0.27
PHGDH-221ENST00000641573 MS4A1P11836 297 aa16.75■□□□□ 0.27
PHGDH-221ENST00000641573 HSPA6P17066 643 aa16.75■□□□□ 0.27
PHGDH-221ENST00000641573 TNNQ9UQP3 1299 aa16.75■□□□□ 0.27
PHGDH-221ENST00000641573 QSER1Q2KHR3 1735 aa16.75■□□□□ 0.27
PHGDH-221ENST00000641573 PNPLA7Q6ZV29 1317 aa16.74■□□□□ 0.27
PHGDH-221ENST00000641573 PCDH11XQ9BZA7 1347 aa16.74■□□□□ 0.27
PHGDH-221ENST00000641573 PCDH11YQ9BZA8 1340 aa16.74■□□□□ 0.27
PHGDH-221ENST00000641573 YBX3P16989 372 aaKnown RBP eCLIP16.74■□□□□ 0.272e-7■□□□□ 10.4
PHGDH-221ENST00000641573 DCAF5Q96JK2 942 aa16.74■□□□□ 0.27
PHGDH-221ENST00000641573 SOS1Q07889 1333 aaPredicted RBP16.73■□□□□ 0.27
PHGDH-221ENST00000641573 KAT6BQ8WYB5 2073 aa16.73■□□□□ 0.27
PHGDH-221ENST00000641573 ATF7IPQ6VMQ6 1270 aa16.73■□□□□ 0.27
PHGDH-221ENST00000641573 CCDC136Q96JN2 1154 aa16.73■□□□□ 0.27
PHGDH-221ENST00000641573 KDM3BQ7LBC6 1761 aa16.72■□□□□ 0.27
PHGDH-221ENST00000641573 MSH5O43196 834 aa16.72■□□□□ 0.27
PHGDH-221ENST00000641573 KCNQ3O43525 872 aa16.72■□□□□ 0.27
PHGDH-221ENST00000641573 RLBP1P12271 317 aa16.72■□□□□ 0.27
PHGDH-221ENST00000641573 TRIM27P14373 513 aa16.72■□□□□ 0.27
PHGDH-221ENST00000641573 EIF4A1P60842 406 aaKnown RBP16.72■□□□□ 0.27
PHGDH-221ENST00000641573 DZIP1LQ8IYY4 767 aaKnown RBP16.72■□□□□ 0.27
PHGDH-221ENST00000641573 CLUAP1Q96AJ1 413 aa16.72■□□□□ 0.27
PHGDH-221ENST00000641573 SLC52A2Q9HAB3 445 aa16.72■□□□□ 0.27
PHGDH-221ENST00000641573 COG6Q9Y2V7 657 aa16.72■□□□□ 0.27
PHGDH-221ENST00000641573 COL24A1Q17RW2 1714 aa16.72■□□□□ 0.27
PHGDH-221ENST00000641573 SCN11AQ9UI33 1791 aa16.72■□□□□ 0.27
PHGDH-221ENST00000641573 VIRMAQ69YN4 1812 aaKnown RBP16.71■□□□□ 0.27
PHGDH-221ENST00000641573 FTSJ3Q8IY81 847 aaKnown RBP16.71■□□□□ 0.27
PHGDH-221ENST00000641573 ARHGAP45Q92619 1136 aa16.71■□□□□ 0.27
PHGDH-221ENST00000641573 SIPA1L3O60292 1781 aaPredicted RBP16.71■□□□□ 0.27
PHGDH-221ENST00000641573 MRC1P22897 1456 aa16.7■□□□□ 0.26
PHGDH-221ENST00000641573 NKX1-1Q15270 411 aaPredicted RBP16.7■□□□□ 0.26
PHGDH-221ENST00000641573 DDX54Q8TDD1 881 aaKnown RBP16.7■□□□□ 0.26
PHGDH-221ENST00000641573 ZNF526Q8TF50 670 aaPredicted RBP16.7■□□□□ 0.26
PHGDH-221ENST00000641573 NFATC2IPQ8NCF5 419 aa16.69■□□□□ 0.26
PHGDH-221ENST00000641573 SYTL4Q96C24 671 aaPredicted RBP16.69■□□□□ 0.26
PHGDH-221ENST00000641573 CABP4P57796 275 aa16.68■□□□□ 0.26
PHGDH-221ENST00000641573 MVPQ14764 893 aaKnown RBP16.68■□□□□ 0.26
PHGDH-221ENST00000641573 CCDC30Q5VVM6 783 aa16.68■□□□□ 0.26
PHGDH-221ENST00000641573 API5Q9BZZ5 524 aaKnown RBP16.68■□□□□ 0.26
PHGDH-221ENST00000641573 SLC4A2P04920 1241 aa16.67■□□□□ 0.26
PHGDH-221ENST00000641573 HOXB7P09629 217 aa16.67■□□□□ 0.26
PHGDH-221ENST00000641573 STK31Q9BXU1 1019 aa16.67■□□□□ 0.26
PHGDH-221ENST00000641573 TUBGCP6Q96RT7 1819 aa16.66■□□□□ 0.26
PHGDH-221ENST00000641573 ERVV-2B6SEH9 535 aa16.66■□□□□ 0.26
PHGDH-221ENST00000641573 KCNQ4P56696 695 aa16.66■□□□□ 0.26
PHGDH-221ENST00000641573 TMEM57Q8N5G2 664 aa16.66■□□□□ 0.26
PHGDH-221ENST00000641573 HEG1Q9ULI3 1381 aa16.65■□□□□ 0.26
PHGDH-221ENST00000641573 SLC39A6Q13433 755 aa16.65■□□□□ 0.26
PHGDH-221ENST00000641573 AAMPQ13685 434 aa16.65■□□□□ 0.26
PHGDH-221ENST00000641573 HDGFL1Q5TGJ6 251 aa16.65■□□□□ 0.26
PHGDH-221ENST00000641573 ZNF790Q6PG37 636 aa16.65■□□□□ 0.26
PHGDH-221ENST00000641573 NECTIN2Q92692 538 aa16.65■□□□□ 0.26
PHGDH-221ENST00000641573 CHMP4AQ9BY43 222 aa16.65■□□□□ 0.26
PHGDH-221ENST00000641573 PTPRCP08575 1304 aa16.65■□□□□ 0.26
PHGDH-221ENST00000641573 ITPRIPQ8IWB1 547 aa16.64■□□□□ 0.25
PHGDH-221ENST00000641573 CCNL1Q9UK58 526 aaPredicted RBP16.64■□□□□ 0.25
PHGDH-221ENST00000641573 TOGARAM1Q9Y4F4 1720 aa16.64■□□□□ 0.25
PHGDH-221ENST00000641573 ABCC4O15439 1325 aa16.64■□□□□ 0.25
PHGDH-221ENST00000641573 ADCY9O60503 1353 aa16.64■□□□□ 0.25
PHGDH-221ENST00000641573 EIF2S2P20042 333 aaKnown RBP16.63■□□□□ 0.25
PHGDH-221ENST00000641573 MSL1Q68DK7 614 aa16.63■□□□□ 0.25
PHGDH-221ENST00000641573 G2E3Q7L622 706 aa16.63■□□□□ 0.25
PHGDH-221ENST00000641573 DDX19BQ9UMR2 479 aa16.63■□□□□ 0.25
PHGDH-221ENST00000641573 CD2APQ9Y5K6 639 aa16.63■□□□□ 0.25
PHGDH-221ENST00000641573 PRIM1P49642 420 aaKnown RBP16.62■□□□□ 0.25
PHGDH-221ENST00000641573 TTC5Q8N0Z6 440 aa16.62■□□□□ 0.25
PHGDH-221ENST00000641573 COL23A1Q86Y22 540 aaPredicted RBP16.61■□□□□ 0.25
PHGDH-221ENST00000641573 APLP1P51693 650 aa16.6■□□□□ 0.25
PHGDH-221ENST00000641573 ZNF496Q96IT1 587 aaPredicted RBP16.6■□□□□ 0.25
PHGDH-221ENST00000641573 LY75O60449 1722 aa16.59■□□□□ 0.25
PHGDH-221ENST00000641573 DOT1LQ8TEK3 1739 aa16.59■□□□□ 0.25
PHGDH-221ENST00000641573 PRAMEF22A3QJZ6 481 aa16.59■□□□□ 0.25
PHGDH-221ENST00000641573 HMGB2P26583 209 aaKnown RBP16.59■□□□□ 0.25
PHGDH-221ENST00000641573 FLIIQ13045 1269 aa16.59■□□□□ 0.25
PHGDH-221ENST00000641573 FMNL2Q96PY5 1086 aa16.59■□□□□ 0.25
PHGDH-221ENST00000641573 TMOD3Q9NYL9 352 aa16.59■□□□□ 0.25
PHGDH-221ENST00000641573 CHPF2Q9P2E5 772 aa16.59■□□□□ 0.25
PHGDH-221ENST00000641573 SNRPA1P09661 255 aaKnown RBP16.57■□□□□ 0.24
PHGDH-221ENST00000641573 INTS3Q68E01 1043 aaKnown RBP16.57■□□□□ 0.24
PHGDH-221ENST00000641573 FLAD1Q8NFF5 587 aa16.57■□□□□ 0.24
PHGDH-221ENST00000641573 CHMP4BQ9H444 224 aaKnown RBP16.57■□□□□ 0.24
PHGDH-221ENST00000641573 DBF4Q9UBU7 674 aaPredicted RBP16.57■□□□□ 0.24
PHGDH-221ENST00000641573 KDM2BQ8NHM5 1336 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms