RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 WNK3Q9BYP7 1800 aa20.54■□□□□ 0.88
PHGDH-216ENST00000641375 UBAP1LF5GYI3 381 aa20.54■□□□□ 0.88
PHGDH-216ENST00000641375 DDX58O95786 925 aaKnown RBP20.54■□□□□ 0.88
PHGDH-216ENST00000641375 ANP32AP39687 249 aaKnown RBP20.54■□□□□ 0.88
PHGDH-216ENST00000641375 ANKRD45Q5TZF3 282 aa20.54■□□□□ 0.88
PHGDH-216ENST00000641375 PAPPAQ13219 1627 aa20.54■□□□□ 0.88
PHGDH-216ENST00000641375 ADCY9O60503 1353 aa20.53■□□□□ 0.88
PHGDH-216ENST00000641375 MSH5O43196 834 aa20.53■□□□□ 0.88
PHGDH-216ENST00000641375 ADAMTS2O95450 1211 aa20.53■□□□□ 0.88
PHGDH-216ENST00000641375 PROSER3Q2NL68 480 aa20.53■□□□□ 0.88
PHGDH-216ENST00000641375 KSR2Q6VAB6 950 aa20.53■□□□□ 0.88
PHGDH-216ENST00000641375 NRAPQ86VF7 1730 aa20.53■□□□□ 0.88
PHGDH-216ENST00000641375 LNPKQ9C0E8 428 aa20.53■□□□□ 0.88
PHGDH-216ENST00000641375 NWD2Q9ULI1 1742 aa20.52■□□□□ 0.88
PHGDH-216ENST00000641375 PDIA6Q15084 440 aa20.52■□□□□ 0.88
PHGDH-216ENST00000641375 BEND3Q5T5X7 828 aa20.52■□□□□ 0.88
PHGDH-216ENST00000641375 USP44Q9H0E7 712 aa20.52■□□□□ 0.88
PHGDH-216ENST00000641375 UBTFL1P0CB47 393 aaPredicted RBP20.51■□□□□ 0.87
PHGDH-216ENST00000641375 CDCA7Q9BWT1 371 aaPredicted RBP20.51■□□□□ 0.87
PHGDH-216ENST00000641375 TOGARAM1Q9Y4F4 1720 aa20.51■□□□□ 0.87
PHGDH-216ENST00000641375 THRAP3Q9Y2W1 955 aaKnown RBP20.51■□□□□ 0.87
PHGDH-216ENST00000641375 GLI3P10071 1580 aa20.5■□□□□ 0.87
PHGDH-216ENST00000641375 ZBTB47Q9UFB7 747 aaPredicted RBP20.5■□□□□ 0.87
PHGDH-216ENST00000641375 MAP3K2Q9Y2U5 619 aa20.5■□□□□ 0.87
PHGDH-216ENST00000641375 USP16Q9Y5T5 823 aa20.49■□□□□ 0.87
PHGDH-216ENST00000641375 EXOC5O00471 708 aa20.49■□□□□ 0.87
PHGDH-216ENST00000641375 ALDH1L1O75891 902 aa20.49■□□□□ 0.87
PHGDH-216ENST00000641375 TMOD3Q9NYL9 352 aa20.49■□□□□ 0.87
PHGDH-216ENST00000641375 NUTM2BA6NNL0 878 aaPredicted RBP20.48■□□□□ 0.87
PHGDH-216ENST00000641375 NUTM2EB1AL46 878 aaPredicted RBP20.48■□□□□ 0.87
PHGDH-216ENST00000641375 NUTM2AQ8IVF1 878 aaPredicted RBP20.48■□□□□ 0.87
PHGDH-216ENST00000641375 ERBB4Q15303 1308 aa20.48■□□□□ 0.87
PHGDH-216ENST00000641375 LRP6O75581 1613 aa20.48■□□□□ 0.87
PHGDH-216ENST00000641375 KCPQ6ZWJ8 1503 aa20.48■□□□□ 0.87
PHGDH-216ENST00000641375 TNS2Q63HR2 1409 aa20.48■□□□□ 0.87
PHGDH-216ENST00000641375 SPATA31A1Q5TZJ5 1347 aa20.47■□□□□ 0.87
PHGDH-216ENST00000641375 LRRFIP2Q9Y608 721 aaKnown RBP20.47■□□□□ 0.87
PHGDH-216ENST00000641375 MYL6BP14649 208 aa20.46■□□□□ 0.87
PHGDH-216ENST00000641375 ATP8B2P98198 1209 aa20.46■□□□□ 0.87
PHGDH-216ENST00000641375 HDAC5Q9UQL6 1122 aa20.46■□□□□ 0.87
PHGDH-216ENST00000641375 ITGB4P16144 1822 aa20.46■□□□□ 0.87
PHGDH-216ENST00000641375 SLIT2O94813 1529 aa20.46■□□□□ 0.87
PHGDH-216ENST00000641375 AIMP1Q12904 312 aaKnown RBP20.45■□□□□ 0.86
PHGDH-216ENST00000641375 LINS1Q8NG48 757 aa20.45■□□□□ 0.86
PHGDH-216ENST00000641375 JCADQ9P266 1359 aa20.45■□□□□ 0.86
PHGDH-216ENST00000641375 IBTKQ9P2D0 1353 aaPredicted RBP20.45■□□□□ 0.86
PHGDH-216ENST00000641375 RIC3Q7Z5B4 369 aa20.44■□□□□ 0.86
PHGDH-216ENST00000641375 NPM2Q86SE8 214 aaKnown RBP20.44■□□□□ 0.86
PHGDH-216ENST00000641375 COPS6Q7L5N1 327 aa20.44■□□□□ 0.86
PHGDH-216ENST00000641375 LRP10Q7Z4F1 713 aa20.44■□□□□ 0.86
PHGDH-216ENST00000641375 XAGE3Q8WTP9 111 aa20.44■□□□□ 0.86
PHGDH-216ENST00000641375 NEXNQ0ZGT2 675 aa20.43■□□□□ 0.86
PHGDH-216ENST00000641375 NBPF7P0C2Y1 421 aaPredicted RBP20.42■□□□□ 0.86
PHGDH-216ENST00000641375 ANKRD13DQ6ZTN6 518 aa20.42■□□□□ 0.86
PHGDH-216ENST00000641375 C9orf78Q9NZ63 289 aaPredicted RBP20.42■□□□□ 0.86
PHGDH-216ENST00000641375 SPATA31A5Q5VU36 1347 aa20.42■□□□□ 0.86
PHGDH-216ENST00000641375 SPATA31A7Q8IWB4 1347 aa20.42■□□□□ 0.86
PHGDH-216ENST00000641375 BMP2KLQ5H9B9 411 aa20.42■□□□□ 0.86
PHGDH-216ENST00000641375 AEBP2Q6ZN18 517 aaPredicted RBP20.42■□□□□ 0.86
PHGDH-216ENST00000641375 PNMA6EA0A0J9YXQ4 647 aa20.41■□□□□ 0.86
PHGDH-216ENST00000641375 PTCD1O75127 700 aaKnown RBP20.41■□□□□ 0.86
PHGDH-216ENST00000641375 VSIG10Q8N0Z9 540 aa20.41■□□□□ 0.86
PHGDH-216ENST00000641375 PIGBQ92521 554 aa20.41■□□□□ 0.86
PHGDH-216ENST00000641375 IPO9Q96P70 1041 aaKnown RBP20.41■□□□□ 0.86
PHGDH-216ENST00000641375 DDB1Q16531 1140 aa20.4■□□□□ 0.86
PHGDH-216ENST00000641375 SSH3Q8TE77 659 aa20.4■□□□□ 0.86
PHGDH-216ENST00000641375 METTL22Q9BUU2 404 aaPredicted RBP20.4■□□□□ 0.86
PHGDH-216ENST00000641375 TEX13AQ9BXU3 409 aaPredicted RBP20.4■□□□□ 0.86
PHGDH-216ENST00000641375 CWF19L2Q2TBE0 894 aaKnown RBP20.39■□□□□ 0.86
PHGDH-216ENST00000641375 BARGINQ6ZT62 677 aa20.39■□□□□ 0.86
PHGDH-216ENST00000641375 BCL9O00512 1426 aa20.39■□□□□ 0.86
PHGDH-216ENST00000641375 KAT6BQ8WYB5 2073 aa20.39■□□□□ 0.85
PHGDH-216ENST00000641375 ARFGEF2Q9Y6D5 1785 aa20.39■□□□□ 0.85
PHGDH-216ENST00000641375 UTYO14607 1347 aa20.39■□□□□ 0.85
PHGDH-216ENST00000641375 GRM8O00222 908 aa20.38■□□□□ 0.85
PHGDH-216ENST00000641375 UPF2Q9HAU5 1272 aaKnown RBP20.38■□□□□ 0.85
PHGDH-216ENST00000641375 PPP1R42Q7Z4L9 355 aa20.38■□□□□ 0.85
PHGDH-216ENST00000641375 UNC5CLQ8IV45 518 aa20.38■□□□□ 0.85
PHGDH-216ENST00000641375 PLEKHM2Q8IWE5 1019 aa20.38■□□□□ 0.85
PHGDH-216ENST00000641375 CERKQ8TCT0 537 aa20.38■□□□□ 0.85
PHGDH-216ENST00000641375 CCDC9Q9Y3X0 531 aaKnown RBP20.38■□□□□ 0.85
PHGDH-216ENST00000641375 POLA2Q14181 598 aa20.37■□□□□ 0.85
PHGDH-216ENST00000641375 PLBD2Q8NHP8 589 aa20.37■□□□□ 0.85
PHGDH-216ENST00000641375 ASAP1Q9ULH1 1129 aa20.37■□□□□ 0.85
PHGDH-216ENST00000641375 PIP4K2AP48426 406 aaPredicted RBP20.36■□□□□ 0.85
PHGDH-216ENST00000641375 MTX1Q13505 466 aa20.36■□□□□ 0.85
PHGDH-216ENST00000641375 LRRCC1Q9C099 1032 aa20.36■□□□□ 0.85
PHGDH-216ENST00000641375 ATG3Q9NT62 314 aa20.36■□□□□ 0.85
PHGDH-216ENST00000641375 EXOC6BQ9Y2D4 811 aa20.36■□□□□ 0.85
PHGDH-216ENST00000641375 SPATA31A6Q5VVP1 1343 aa20.36■□□□□ 0.85
PHGDH-216ENST00000641375 DOT1LQ8TEK3 1739 aa20.36■□□□□ 0.85
PHGDH-216ENST00000641375 NEURL1BA8MQ27 555 aa20.36■□□□□ 0.85
PHGDH-216ENST00000641375 NBPF26B4DH59 902 aa20.36■□□□□ 0.85
PHGDH-216ENST00000641375 APBB1O00213 710 aa20.36■□□□□ 0.85
PHGDH-216ENST00000641375 SRGAP3O43295 1099 aa20.36■□□□□ 0.85
PHGDH-216ENST00000641375 IGKV5-2P06315 115 aa20.36■□□□□ 0.85
PHGDH-216ENST00000641375 NBPF14Q5TI25 921 aa20.36■□□□□ 0.85
PHGDH-216ENST00000641375 NBPF10Q6P3W6 841 aaKnown RBP20.36■□□□□ 0.85
PHGDH-216ENST00000641375 NBPF15Q8N660 670 aa20.36■□□□□ 0.85
PHGDH-216ENST00000641375 AFDNP55196 1824 aaKnown RBP20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms