RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 OGFRQ9NZT2 677 aa16.42■□□□□ 0.22
SCARB2-227ENST00000640957 SLFN14P0C7P3 912 aa16.41■□□□□ 0.22
SCARB2-227ENST00000640957 GORABQ5T7V8 394 aa16.41■□□□□ 0.22
SCARB2-227ENST00000640957 ZNF215Q9UL58 517 aaPredicted RBP16.41■□□□□ 0.22
SCARB2-227ENST00000640957 MED14O60244 1454 aa16.41■□□□□ 0.22
SCARB2-227ENST00000640957 RPAP1Q9BWH6 1393 aaPredicted RBP16.41■□□□□ 0.22
SCARB2-227ENST00000640957 KIDINS220Q9ULH0 1771 aa16.41■□□□□ 0.22
SCARB2-227ENST00000640957 F13A1P00488 732 aa16.41■□□□□ 0.22
SCARB2-227ENST00000640957 RUFY3Q7L099 469 aa16.41■□□□□ 0.22
SCARB2-227ENST00000640957 ELF2Q15723 593 aa16.41■□□□□ 0.22
SCARB2-227ENST00000640957 CCDC144BQ3MJ40 725 aa16.41■□□□□ 0.22
SCARB2-227ENST00000640957 CCDC144CPQ8IYA2 1237 aa16.41■□□□□ 0.22
SCARB2-227ENST00000640957 CACTINQ8WUQ7 758 aaKnown RBP16.4■□□□□ 0.22
SCARB2-227ENST00000640957 LRRCC1Q9C099 1032 aa16.4■□□□□ 0.22
SCARB2-227ENST00000640957 DNAJC25Q9H1X3 360 aa16.4■□□□□ 0.22
SCARB2-227ENST00000640957 YTHDC2Q9H6S0 1430 aaKnown RBP16.4■□□□□ 0.22
SCARB2-227ENST00000640957 WASLO00401 505 aaPredicted RBP16.4■□□□□ 0.22
SCARB2-227ENST00000640957 HSP90AB2PQ58FF8 381 aa16.4■□□□□ 0.22
SCARB2-227ENST00000640957 DACT1Q9NYF0 836 aa16.4■□□□□ 0.22
SCARB2-227ENST00000640957 MROH2AA6NES4 1674 aa16.4■□□□□ 0.22
SCARB2-227ENST00000640957 GOLGA6L4A6NEF3 574 aa16.39■□□□□ 0.21
SCARB2-227ENST00000640957 CCDC192P0DO97 292 aa16.39■□□□□ 0.21
SCARB2-227ENST00000640957 GOLGA6L6A8MZA4 724 aa16.39■□□□□ 0.21
SCARB2-227ENST00000640957 HMMRO75330 724 aa16.39■□□□□ 0.21
SCARB2-227ENST00000640957 AMPHP49418 695 aa16.39■□□□□ 0.21
SCARB2-227ENST00000640957 KMT5BQ4FZB7 885 aa16.39■□□□□ 0.21
SCARB2-227ENST00000640957 DDX11Q96FC9 970 aa16.39■□□□□ 0.21
SCARB2-227ENST00000640957 CCDC61Q9Y6R9 512 aa16.39■□□□□ 0.21
SCARB2-227ENST00000640957 ATP10DQ9P241 1426 aa16.39■□□□□ 0.21
SCARB2-227ENST00000640957 ADCK5Q3MIX3 580 aa16.39■□□□□ 0.21
SCARB2-227ENST00000640957 PTCH1Q13635 1447 aa16.39■□□□□ 0.21
SCARB2-227ENST00000640957 INO80Q9ULG1 1556 aaPredicted RBP16.39■□□□□ 0.21
SCARB2-227ENST00000640957 TYRO3Q06418 890 aa16.38■□□□□ 0.21
SCARB2-227ENST00000640957 NSD2O96028 1365 aa16.38■□□□□ 0.21
SCARB2-227ENST00000640957 MCM2P49736 904 aa16.38■□□□□ 0.21
SCARB2-227ENST00000640957 CBX8Q9HC52 389 aa16.38■□□□□ 0.21
SCARB2-227ENST00000640957 POLR3GO15318 223 aaPredicted RBP16.37■□□□□ 0.21
SCARB2-227ENST00000640957 ZNF853P0CG23 659 aa16.37■□□□□ 0.21
SCARB2-227ENST00000640957 TTC6Q86TZ1 520 aa16.37■□□□□ 0.21
SCARB2-227ENST00000640957 USP16Q9Y5T5 823 aa16.37■□□□□ 0.21
SCARB2-227ENST00000640957 LRRFIP2Q9Y608 721 aaKnown RBP16.37■□□□□ 0.21
SCARB2-227ENST00000640957 ARHGAP31Q2M1Z3 1444 aa16.37■□□□□ 0.21
SCARB2-227ENST00000640957 CTIFO43310 598 aaKnown RBP16.37■□□□□ 0.21
SCARB2-227ENST00000640957 CLIP2Q9UDT6 1046 aa16.37■□□□□ 0.21
SCARB2-227ENST00000640957 SNX14Q9Y5W7 946 aa16.37■□□□□ 0.21
SCARB2-227ENST00000640957 ZSCAN25Q6NSZ9 544 aa16.37■□□□□ 0.21
SCARB2-227ENST00000640957 INTS4Q96HW7 963 aaKnown RBP16.37■□□□□ 0.21
SCARB2-227ENST00000640957 JAKMIP1Q96N16 626 aaKnown RBP16.37■□□□□ 0.21
SCARB2-227ENST00000640957 MRVI1Q9Y6F6 885 aa16.37■□□□□ 0.21
SCARB2-227ENST00000640957 PRPF40BQ6NWY9 871 aaKnown RBP16.36■□□□□ 0.21
SCARB2-227ENST00000640957 LRRN4CLQ8ND94 238 aa16.36■□□□□ 0.21
SCARB2-227ENST00000640957 KIF18AQ8NI77 898 aa16.36■□□□□ 0.21
SCARB2-227ENST00000640957 FUCA2Q9BTY2 467 aa16.36■□□□□ 0.21
SCARB2-227ENST00000640957 TNMDQ9H2S6 317 aa16.36■□□□□ 0.21
SCARB2-227ENST00000640957 TMX1Q9H3N1 280 aa16.36■□□□□ 0.21
SCARB2-227ENST00000640957 ABCA9Q8IUA7 1624 aa16.36■□□□□ 0.21
SCARB2-227ENST00000640957 ABCC3O15438 1527 aa16.36■□□□□ 0.21
SCARB2-227ENST00000640957 LMOD3Q0VAK6 560 aa16.36■□□□□ 0.21
SCARB2-227ENST00000640957 NUP62CLQ9H1M0 184 aa16.36■□□□□ 0.21
SCARB2-227ENST00000640957 DDX41Q9UJV9 622 aaKnown RBP16.36■□□□□ 0.21
SCARB2-227ENST00000640957 TERF2Q15554 542 aa16.36■□□□□ 0.21
SCARB2-227ENST00000640957 CEP135Q66GS9 1140 aa16.36■□□□□ 0.21
SCARB2-227ENST00000640957 FBXO38Q6PIJ6 1188 aa16.36■□□□□ 0.21
SCARB2-227ENST00000640957 CDC37L1Q7L3B6 337 aa16.36■□□□□ 0.21
SCARB2-227ENST00000640957 TSPYL4Q9UJ04 414 aa16.36■□□□□ 0.21
SCARB2-227ENST00000640957 ADGRB2O60241 1585 aa16.35■□□□□ 0.21
SCARB2-227ENST00000640957 SURF6O75683 361 aaKnown RBP16.35■□□□□ 0.21
SCARB2-227ENST00000640957 KNDC1Q76NI1 1749 aa16.35■□□□□ 0.21
SCARB2-227ENST00000640957 LRRC7Q96NW7 1537 aa16.35■□□□□ 0.21
SCARB2-227ENST00000640957 BRPF1P55201 1214 aaPredicted RBP16.35■□□□□ 0.21
SCARB2-227ENST00000640957 MAP3K11Q16584 847 aa16.35■□□□□ 0.21
SCARB2-227ENST00000640957 TRIM34Q9BYJ4 488 aa16.35■□□□□ 0.21
SCARB2-227ENST00000640957 TULP4Q9NRJ4 1543 aa16.35■□□□□ 0.21
SCARB2-227ENST00000640957 MROH1Q8NDA8 1641 aa16.35■□□□□ 0.21
SCARB2-227ENST00000640957 IL13P35225 146 aa16.34■□□□□ 0.21
SCARB2-227ENST00000640957 BICD2Q8TD16 824 aa16.34■□□□□ 0.21
SCARB2-227ENST00000640957 QRICH2Q9H0J4 1663 aa16.34■□□□□ 0.21
SCARB2-227ENST00000640957 GNAI2P04899 355 aa16.34■□□□□ 0.21
SCARB2-227ENST00000640957 PTPN21Q16825 1174 aa16.34■□□□□ 0.21
SCARB2-227ENST00000640957 LARP1BQ659C4 914 aaKnown RBP16.34■□□□□ 0.21
SCARB2-227ENST00000640957 FAM200AQ8TCP9 573 aa16.34■□□□□ 0.21
SCARB2-227ENST00000640957 FEZ1Q99689 392 aa16.34■□□□□ 0.21
SCARB2-227ENST00000640957 MTMR6Q9Y217 621 aa16.34■□□□□ 0.21
SCARB2-227ENST00000640957 PIK3R4Q99570 1358 aa16.34■□□□□ 0.21
SCARB2-227ENST00000640957 USHBP1Q8N6Y0 703 aa16.34■□□□□ 0.21
SCARB2-227ENST00000640957 LIMCH1Q9UPQ0 1083 aa16.34■□□□□ 0.21
SCARB2-227ENST00000640957 TSPOAP1O95153 1857 aa16.33■□□□□ 0.21
SCARB2-227ENST00000640957 EIF2S2P20042 333 aaKnown RBP16.33■□□□□ 0.2
SCARB2-227ENST00000640957 ZNF165P49910 485 aa16.33■□□□□ 0.2
SCARB2-227ENST00000640957 METP08581 1390 aa16.32■□□□□ 0.2
SCARB2-227ENST00000640957 SMTNL1A8MU46 457 aa16.32■□□□□ 0.2
SCARB2-227ENST00000640957 PTH1RQ03431 593 aa16.32■□□□□ 0.2
SCARB2-227ENST00000640957 MLH3Q9UHC1 1453 aa16.32■□□□□ 0.2
SCARB2-227ENST00000640957 ADGRB3O60242 1522 aa16.32■□□□□ 0.2
SCARB2-227ENST00000640957 ARHGEF40Q8TER5 1519 aa16.32■□□□□ 0.2
SCARB2-227ENST00000640957 NR1I2O75469 434 aa16.32■□□□□ 0.2
SCARB2-227ENST00000640957 ERCC6LQ2NKX8 1250 aa16.32■□□□□ 0.2
SCARB2-227ENST00000640957 KRT222Q8N1A0 295 aa16.32■□□□□ 0.2
SCARB2-227ENST00000640957 EPC1Q9H2F5 836 aa16.32■□□□□ 0.2
SCARB2-227ENST00000640957 NLRP6P59044 892 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms