RNA–Protein interactions for RNA: ENST00000640859.1

GFAP-238, Transcript of glial fibrillary acidic protein, human

TSL 5

Gene GFAP, Length 1,162 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GFAP-238	ENST00000640859	ATP10D	Q9P241	1426 aa		14.12	□□□□□ -0.15
GFAP-238	ENST00000640859	SEC24B	O95487	1268 aa		14.11	□□□□□ -0.15
GFAP-238	ENST00000640859	FLII	Q13045	1269 aa		14.11	□□□□□ -0.15
GFAP-238	ENST00000640859	FAM98C	Q17RN3	349 aa	Known RBP	14.11	□□□□□ -0.15
GFAP-238	ENST00000640859	C1orf141	Q5JVX7	400 aa		14.11	□□□□□ -0.15
GFAP-238	ENST00000640859	MPRIP	Q6WCQ1	1025 aa		14.11	□□□□□ -0.15
GFAP-238	ENST00000640859	BARGIN	Q6ZT62	677 aa		14.11	□□□□□ -0.15
GFAP-238	ENST00000640859	RPAP2	Q8IXW5	612 aa	Predicted RBP	14.11	□□□□□ -0.15
GFAP-238	ENST00000640859	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	14.11	□□□□□ -0.15
GFAP-238	ENST00000640859		F6X3S4	739 aa		14.1	□□□□□ -0.15
GFAP-238	ENST00000640859	KCNQ3	O43525	872 aa		14.1	□□□□□ -0.15
GFAP-238	ENST00000640859	TEF	Q10587	303 aa		14.1	□□□□□ -0.15
GFAP-238	ENST00000640859	RAPGEF4	Q8WZA2	1011 aa		14.1	□□□□□ -0.15
GFAP-238	ENST00000640859	MEIS3	Q99687	375 aa		14.1	□□□□□ -0.15
GFAP-238	ENST00000640859	LNPK	Q9C0E8	428 aa		14.1	□□□□□ -0.15
GFAP-238	ENST00000640859	DCTPP1	Q9H773	170 aa		14.1	□□□□□ -0.15
GFAP-238	ENST00000640859	PLEKHG2	Q9H7P9	1386 aa		14.09	□□□□□ -0.15
GFAP-238	ENST00000640859	BTBD11	A6QL63	1104 aa		14.09	□□□□□ -0.15
GFAP-238	ENST00000640859	ANKRD45	Q5TZF3	282 aa		14.09	□□□□□ -0.15
GFAP-238	ENST00000640859	CEP85	Q6P2H3	762 aa		14.09	□□□□□ -0.15
GFAP-238	ENST00000640859	CHMP4A	Q9BY43	222 aa		14.09	□□□□□ -0.15
GFAP-238	ENST00000640859	ZBTB12	Q9Y330	459 aa	Predicted RBP	14.09	□□□□□ -0.15
GFAP-238	ENST00000640859	IL2RB	P14784	551 aa		14.08	□□□□□ -0.16
GFAP-238	ENST00000640859	HDGFL1	Q5TGJ6	251 aa		14.08	□□□□□ -0.16
GFAP-238	ENST00000640859	SEPT12	Q8IYM1	358 aa		14.08	□□□□□ -0.16
GFAP-238	ENST00000640859	NECTIN2	Q92692	538 aa		14.08	□□□□□ -0.16
GFAP-238	ENST00000640859	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	14.08	□□□□□ -0.16
GFAP-238	ENST00000640859	SCN11A	Q9UI33	1791 aa		14.08	□□□□□ -0.16
GFAP-238	ENST00000640859	HEG1	Q9ULI3	1381 aa		14.08	□□□□□ -0.16
GFAP-238	ENST00000640859	PXDNL	A1KZ92	1463 aa		14.07	□□□□□ -0.16
GFAP-238	ENST00000640859	EXOC5	O00471	708 aa		14.07	□□□□□ -0.16
GFAP-238	ENST00000640859	TAT	P17735	454 aa	Predicted RBP	14.07	□□□□□ -0.16
GFAP-238	ENST00000640859	DDB1	Q16531	1140 aa		14.07	□□□□□ -0.16
GFAP-238	ENST00000640859	SLC4A10	Q6U841	1118 aa		14.07	□□□□□ -0.16
GFAP-238	ENST00000640859	ONECUT3	O60422	494 aa	Predicted RBP	14.06	□□□□□ -0.16
GFAP-238	ENST00000640859	FKBP5	Q13451	457 aa	Predicted RBP	14.06	□□□□□ -0.16
GFAP-238	ENST00000640859	MEGF6	O75095	1541 aa		14.05	□□□□□ -0.16
GFAP-238	ENST00000640859	PKD1L3	Q7Z443	1732 aa		14.05	□□□□□ -0.16
GFAP-238	ENST00000640859	NRAP	Q86VF7	1730 aa		14.05	□□□□□ -0.16
GFAP-238	ENST00000640859	KRT27	Q7Z3Y8	459 aa		14.05	□□□□□ -0.16
GFAP-238	ENST00000640859	PHAX	Q9H814	394 aa	Known RBP	14.05	□□□□□ -0.16
GFAP-238	ENST00000640859	SPG7	Q9UQ90	795 aa		14.05	□□□□□ -0.16
GFAP-238	ENST00000640859	GNAI2	P04899	355 aa		14.04	□□□□□ -0.16
GFAP-238	ENST00000640859	GNAI3	P08754	354 aa		14.04	□□□□□ -0.16
GFAP-238	ENST00000640859	PHKG2	P15735	406 aa		14.04	□□□□□ -0.16
GFAP-238	ENST00000640859	EIF2S2	P20042	333 aa	Known RBP	14.04	□□□□□ -0.16
GFAP-238	ENST00000640859	BMP2KL	Q5H9B9	411 aa		14.04	□□□□□ -0.16
GFAP-238	ENST00000640859	KDM6A	O15550	1401 aa	Predicted RBP	14.04	□□□□□ -0.16
GFAP-238	ENST00000640859	GIGYF1	O75420	1035 aa	Predicted RBP	14.03	□□□□□ -0.16
GFAP-238	ENST00000640859	TBC1D32	Q96NH3	1257 aa		14.03	□□□□□ -0.16
GFAP-238	ENST00000640859	CHPF2	Q9P2E5	772 aa		14.03	□□□□□ -0.16
GFAP-238	ENST00000640859	HMMR	O75330	724 aa		14.02	□□□□□ -0.17
GFAP-238	ENST00000640859	IFNL2	Q8IZJ0	200 aa		14.02	□□□□□ -0.17
GFAP-238	ENST00000640859	GLI3	P10071	1580 aa		14.01	□□□□□ -0.17
GFAP-238	ENST00000640859	MRC1	P22897	1456 aa		14.01	□□□□□ -0.17
GFAP-238	ENST00000640859	ATP8B2	P98198	1209 aa		14.01	□□□□□ -0.17
GFAP-238	ENST00000640859	SF3B2	Q13435	895 aa	Known RBP	14.01	□□□□□ -0.17
GFAP-238	ENST00000640859	PLEKHM2	Q8IWE5	1019 aa		14.01	□□□□□ -0.17
GFAP-238	ENST00000640859	USP44	Q9H0E7	712 aa		14.01	□□□□□ -0.17
GFAP-238	ENST00000640859	SLC52A2	Q9HAB3	445 aa		14.01	□□□□□ -0.17
GFAP-238	ENST00000640859	UPF2	Q9HAU5	1272 aa	Known RBP	14.01	□□□□□ -0.17
GFAP-238	ENST00000640859	CYP27B1	O15528	508 aa		14	□□□□□ -0.17
GFAP-238	ENST00000640859	FAM196A	Q6ZSG2	479 aa		14	□□□□□ -0.17
GFAP-238	ENST00000640859	ZCRB1	Q8TBF4	217 aa	Known RBP	14	□□□□□ -0.17
GFAP-238	ENST00000640859	DBF4	Q9UBU7	674 aa	Predicted RBP	14	□□□□□ -0.17
GFAP-238	ENST00000640859	BEND3	Q5T5X7	828 aa		13.99	□□□□□ -0.17
GFAP-238	ENST00000640859	DNAAF4	Q8WXU2	420 aa		13.99	□□□□□ -0.17
GFAP-238	ENST00000640859	SRCIN1	Q9C0H9	1055 aa		13.99	□□□□□ -0.17
GFAP-238	ENST00000640859	PARP4	Q9UKK3	1724 aa	Known RBP	13.98	□□□□□ -0.17
GFAP-238	ENST00000640859	PCDH11X	Q9BZA7	1347 aa		13.98	□□□□□ -0.17
GFAP-238	ENST00000640859	PCDH11Y	Q9BZA8	1340 aa		13.98	□□□□□ -0.17
GFAP-238	ENST00000640859	ANXA1	P04083	346 aa		13.98	□□□□□ -0.17
GFAP-238	ENST00000640859	HSP90AB1	P08238	724 aa	Known RBP	13.98	□□□□□ -0.17
GFAP-238	ENST00000640859	ZNF790	Q6PG37	636 aa		13.98	□□□□□ -0.17
GFAP-238	ENST00000640859	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.98	□□□□□ -0.17
GFAP-238	ENST00000640859	DDX54	Q8TDD1	881 aa	Known RBP	13.98	□□□□□ -0.17
GFAP-238	ENST00000640859	DCAF5	Q96JK2	942 aa		13.98	□□□□□ -0.17
GFAP-238	ENST00000640859	ADCY9	O60503	1353 aa		13.97	□□□□□ -0.17
GFAP-238	ENST00000640859	PRAMEF22	A3QJZ6	481 aa		13.97	□□□□□ -0.17
GFAP-238	ENST00000640859	PI4KAP2	A4QPH2	592 aa		13.97	□□□□□ -0.17
GFAP-238	ENST00000640859	SMARCA5	O60264	1052 aa	Predicted RBP	13.97	□□□□□ -0.17
GFAP-238	ENST00000640859	SLC4A3	P48751	1232 aa		13.97	□□□□□ -0.17
GFAP-238	ENST00000640859	PROSER3	Q2NL68	480 aa		13.97	□□□□□ -0.17
GFAP-238	ENST00000640859	PI4KAP1	Q8N8J0	262 aa		13.97	□□□□□ -0.17
GFAP-238	ENST00000640859	HYPK	Q9NX55	129 aa		13.97	□□□□□ -0.17
GFAP-238	ENST00000640859	LRRFIP2	Q9Y608	721 aa	Known RBP	13.97	□□□□□ -0.17
GFAP-238	ENST00000640859	C5	P01031	1676 aa		13.97	□□□□□ -0.17
GFAP-238	ENST00000640859	PNMA6E	A0A0J9YXQ4	647 aa		13.96	□□□□□ -0.17
GFAP-238	ENST00000640859	UBTFL1	P0CB47	393 aa	Predicted RBP	13.96	□□□□□ -0.17
GFAP-238	ENST00000640859	MFAP1	P55081	439 aa	Known RBP	13.96	□□□□□ -0.17
GFAP-238	ENST00000640859	SLC39A6	Q13433	755 aa		13.96	□□□□□ -0.17
GFAP-238	ENST00000640859	PDIA6	Q15084	440 aa		13.96	□□□□□ -0.17
GFAP-238	ENST00000640859	TTC22	Q5TAA0	569 aa		13.96	□□□□□ -0.17
GFAP-238	ENST00000640859	ILDR2	Q71H61	639 aa		13.96	□□□□□ -0.17
GFAP-238	ENST00000640859	CCDC125	Q86Z20	511 aa		13.96	□□□□□ -0.17
GFAP-238	ENST00000640859	NFATC2IP	Q8NCF5	419 aa		13.96	□□□□□ -0.17
GFAP-238	ENST00000640859	C22orf23	Q9BZE7	217 aa		13.96	□□□□□ -0.17
GFAP-238	ENST00000640859	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.96	□□□□□ -0.17
GFAP-238	ENST00000640859	TNS2	Q63HR2	1409 aa		13.96	□□□□□ -0.18
GFAP-238	ENST00000640859	ALDH1L1	O75891	902 aa		13.95	□□□□□ -0.18

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