RNA–Protein interactions for RNA: ENST00000640840.1

PRICKLE1-220, Transcript of prickle planar cell polarity protein 1, humanhuman

TSL 5

Gene PRICKLE1, Length 3,735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1-220ENST00000640840 AMIGO3Q86WK7 504 aa7.57□□□□□ -1.2
PRICKLE1-220ENST00000640840 VSIG10Q8N0Z9 540 aa7.57□□□□□ -1.2
PRICKLE1-220ENST00000640840 PNPLA7Q6ZV29 1317 aa7.57□□□□□ -1.2
PRICKLE1-220ENST00000640840 ZBTB22O15209 634 aa7.57□□□□□ -1.2
PRICKLE1-220ENST00000640840 SYTL4Q96C24 671 aaPredicted RBP7.57□□□□□ -1.2
PRICKLE1-220ENST00000640840 CCNL1Q9UK58 526 aaPredicted RBP7.56□□□□□ -1.2
PRICKLE1-220ENST00000640840 RC3H1Q5TC82 1133 aaKnown RBP7.56□□□□□ -1.2
PRICKLE1-220ENST00000640840 MCM10Q7L590 875 aa7.56□□□□□ -1.2
PRICKLE1-220ENST00000640840 SGIP1Q9BQI5 828 aa7.56□□□□□ -1.2
PRICKLE1-220ENST00000640840 BABAM1Q9NWV8 329 aa7.56□□□□□ -1.2
PRICKLE1-220ENST00000640840 CCDC27Q2M243 656 aa7.56□□□□□ -1.2
PRICKLE1-220ENST00000640840 KCNQ4P56696 695 aa7.55□□□□□ -1.2
PRICKLE1-220ENST00000640840 ZNF790Q6PG37 636 aa7.55□□□□□ -1.2
PRICKLE1-220ENST00000640840 SRCAPQ6ZRS2 3230 aa7.55□□□□□ -1.2
PRICKLE1-220ENST00000640840 ZNF853P0CG23 659 aa7.55□□□□□ -1.2
PRICKLE1-220ENST00000640840 PLCB2Q00722 1185 aa7.55□□□□□ -1.2
PRICKLE1-220ENST00000640840 PDGFDQ9GZP0 370 aaPredicted RBP7.55□□□□□ -1.2
PRICKLE1-220ENST00000640840 DCTN1Q14203 1278 aa7.55□□□□□ -1.2
PRICKLE1-220ENST00000640840 INTS5Q6P9B9 1019 aaKnown RBP7.55□□□□□ -1.2
PRICKLE1-220ENST00000640840 FGD1P98174 961 aa7.54□□□□□ -1.2
PRICKLE1-220ENST00000640840 R3HDM1Q15032 1099 aaKnown RBP7.54□□□□□ -1.2
PRICKLE1-220ENST00000640840 WDR43Q15061 677 aaKnown RBP eCLIP7.54□□□□□ -1.2
PRICKLE1-220ENST00000640840 NBPF14Q5TI25 921 aa7.54□□□□□ -1.2
PRICKLE1-220ENST00000640840 CCDC146Q8IYE0 955 aa7.54□□□□□ -1.2
PRICKLE1-220ENST00000640840 KCNQ3O43525 872 aa7.54□□□□□ -1.2
PRICKLE1-220ENST00000640840 CYP19A1P11511 503 aaPredicted RBP7.54□□□□□ -1.2
PRICKLE1-220ENST00000640840 HMGB2P26583 209 aaKnown RBP7.54□□□□□ -1.2
PRICKLE1-220ENST00000640840 SKAP1Q86WV1 359 aa7.54□□□□□ -1.2
PRICKLE1-220ENST00000640840 CNKSR2Q8WXI2 1034 aa7.54□□□□□ -1.2
PRICKLE1-220ENST00000640840 AFDNP55196 1824 aaKnown RBP7.54□□□□□ -1.2
PRICKLE1-220ENST00000640840 ZNF521Q96K83 1311 aa7.54□□□□□ -1.2
PRICKLE1-220ENST00000640840 BRD2P25440 801 aaKnown RBP7.54□□□□□ -1.2
PRICKLE1-220ENST00000640840 PTGER2P43116 358 aa7.54□□□□□ -1.2
PRICKLE1-220ENST00000640840 SLC4A3P48751 1232 aa7.54□□□□□ -1.2
PRICKLE1-220ENST00000640840 RIPK4P57078 832 aa7.54□□□□□ -1.2
PRICKLE1-220ENST00000640840 SLC39A6Q13433 755 aa7.54□□□□□ -1.2
PRICKLE1-220ENST00000640840 TAF7Q15545 349 aaPredicted RBP7.54□□□□□ -1.2
PRICKLE1-220ENST00000640840 BRCA1P38398 1863 aaKnown RBP7.54□□□□□ -1.2
PRICKLE1-220ENST00000640840 FRAT1Q92837 279 aaPredicted RBP7.53□□□□□ -1.2
PRICKLE1-220ENST00000640840 ANKRD36CQ5JPF3 1778 aa7.53□□□□□ -1.2
PRICKLE1-220ENST00000640840 DLEC1Q9Y238 1755 aa7.53□□□□□ -1.2
PRICKLE1-220ENST00000640840 MAPK8IP3Q9UPT6 1336 aa7.53□□□□□ -1.2
PRICKLE1-220ENST00000640840 CHL1O00533 1208 aa7.53□□□□□ -1.2
PRICKLE1-220ENST00000640840 ATP6V1AP38606 617 aa7.53□□□□□ -1.2
PRICKLE1-220ENST00000640840 ZNF496Q96IT1 587 aaPredicted RBP7.53□□□□□ -1.2
PRICKLE1-220ENST00000640840 MRS2Q9HD23 443 aa7.53□□□□□ -1.2
PRICKLE1-220ENST00000640840 STK32BQ9NY57 414 aa7.53□□□□□ -1.2
PRICKLE1-220ENST00000640840 PSDA5PKW4 1024 aaPredicted RBP7.53□□□□□ -1.2
PRICKLE1-220ENST00000640840 BTBD11A6QL63 1104 aa7.53□□□□□ -1.2
PRICKLE1-220ENST00000640840 SSFA2P28290 1259 aa7.53□□□□□ -1.2
PRICKLE1-220ENST00000640840 LMOD3Q0VAK6 560 aa7.52□□□□□ -1.21
PRICKLE1-220ENST00000640840 THUMPD2Q9BTF0 503 aaKnown RBP7.52□□□□□ -1.21
PRICKLE1-220ENST00000640840 NUP98P52948 1817 aa7.52□□□□□ -1.21
PRICKLE1-220ENST00000640840 EIF4A1P60842 406 aaKnown RBP7.52□□□□□ -1.21
PRICKLE1-220ENST00000640840 COL23A1Q86Y22 540 aaPredicted RBP7.52□□□□□ -1.21
PRICKLE1-220ENST00000640840 SOS1Q07889 1333 aaPredicted RBP7.52□□□□□ -1.21
PRICKLE1-220ENST00000640840 APAF1O14727 1248 aa7.52□□□□□ -1.21
PRICKLE1-220ENST00000640840 TEFQ10587 303 aa7.52□□□□□ -1.21
PRICKLE1-220ENST00000640840 GSE1Q14687 1217 aa7.52□□□□□ -1.21
PRICKLE1-220ENST00000640840 RTF1Q92541 710 aaKnown RBP7.52□□□□□ -1.21
PRICKLE1-220ENST00000640840 CRKLP46109 303 aaKnown RBP7.51□□□□□ -1.21
PRICKLE1-220ENST00000640840 LRP10Q7Z4F1 713 aa7.51□□□□□ -1.21
PRICKLE1-220ENST00000640840 CACNA1FO60840 1977 aa7.51□□□□□ -1.21
PRICKLE1-220ENST00000640840 RPS6KA4O75676 772 aa7.51□□□□□ -1.21
PRICKLE1-220ENST00000640840 DNAJC10Q8IXB1 793 aa7.51□□□□□ -1.21
PRICKLE1-220ENST00000640840 SLC16A10Q8TF71 515 aa7.51□□□□□ -1.21
PRICKLE1-220ENST00000640840 FMNL2Q96PY5 1086 aa7.51□□□□□ -1.21
PRICKLE1-220ENST00000640840 ZMYND15Q9H091 742 aa7.51□□□□□ -1.21
PRICKLE1-220ENST00000640840 RRP7AQ9Y3A4 280 aaKnown RBP7.51□□□□□ -1.21
PRICKLE1-220ENST00000640840 IL16Q14005 1332 aa7.51□□□□□ -1.21
PRICKLE1-220ENST00000640840 ANKRD31Q8N7Z5 1873 aa7.5□□□□□ -1.21
PRICKLE1-220ENST00000640840 ARFGEF2Q9Y6D5 1785 aa7.5□□□□□ -1.21
PRICKLE1-220ENST00000640840 PRAMEF22A3QJZ6 481 aa7.5□□□□□ -1.21
PRICKLE1-220ENST00000640840 PTCD1O75127 700 aaKnown RBP7.5□□□□□ -1.21
PRICKLE1-220ENST00000640840 GIGYF1O75420 1035 aaPredicted RBP7.5□□□□□ -1.21
PRICKLE1-220ENST00000640840 FLAD1Q8NFF5 587 aa7.5□□□□□ -1.21
PRICKLE1-220ENST00000640840 CFAP44Q96MT7 982 aa7.5□□□□□ -1.21
PRICKLE1-220ENST00000640840 WWC1Q8IX03 1113 aa7.5□□□□□ -1.21
PRICKLE1-220ENST00000640840 MTFR1LQ9H019 292 aa7.5□□□□□ -1.21
PRICKLE1-220ENST00000640840 EIF5P55010 431 aaKnown RBP7.5□□□□□ -1.21
PRICKLE1-220ENST00000640840 NGEFQ8N5V2 710 aa7.5□□□□□ -1.21
PRICKLE1-220ENST00000640840 RBM42Q9BTD8 480 aaKnown RBP7.5□□□□□ -1.21
PRICKLE1-220ENST00000640840 TEX13AQ9BXU3 409 aaPredicted RBP7.5□□□□□ -1.21
PRICKLE1-220ENST00000640840 IFT57Q9NWB7 429 aa7.5□□□□□ -1.21
PRICKLE1-220ENST00000640840 N4BP2Q86UW6 1770 aaPredicted RBP7.49□□□□□ -1.21
PRICKLE1-220ENST00000640840 CCDC87Q9NVE4 849 aa7.49□□□□□ -1.21
PRICKLE1-220ENST00000640840 MIS18AQ9NYP9 233 aa7.49□□□□□ -1.21
PRICKLE1-220ENST00000640840 COL15A1P39059 1388 aa7.49□□□□□ -1.21
PRICKLE1-220ENST00000640840 RGL2O15211 777 aa7.49□□□□□ -1.21
PRICKLE1-220ENST00000640840 PDIA6Q15084 440 aa7.49□□□□□ -1.21
PRICKLE1-220ENST00000640840 NFKBIBQ15653 356 aa7.49□□□□□ -1.21
PRICKLE1-220ENST00000640840 TFCP2L1Q9NZI6 479 aa7.49□□□□□ -1.21
PRICKLE1-220ENST00000640840 USP16Q9Y5T5 823 aa7.49□□□□□ -1.21
PRICKLE1-220ENST00000640840 ZBED9Q6R2W3 1325 aa7.49□□□□□ -1.21
PRICKLE1-220ENST00000640840 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.49□□□□□ -1.21
PRICKLE1-220ENST00000640840 NBPF26B4DH59 902 aa7.49□□□□□ -1.21
PRICKLE1-220ENST00000640840 SNRPA1P09661 255 aaKnown RBP7.49□□□□□ -1.21
PRICKLE1-220ENST00000640840 PDE4AP27815 886 aa7.49□□□□□ -1.21
PRICKLE1-220ENST00000640840 NBPF10Q6P3W6 841 aaKnown RBP7.49□□□□□ -1.21
PRICKLE1-220ENST00000640840 SMIM5Q71RC9 77 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms