RNA–Protein interactions for RNA: ENST00000640765.1

TRPS1-212, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 2 BASIC

Gene TRPS1, Length 9,514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-212ENST00000640765 SAMD1Q6SPF0 538 aaPredicted RBP9.76□□□□□ -0.85
TRPS1-212ENST00000640765 WASF1Q92558 559 aa9.76□□□□□ -0.85
TRPS1-212ENST00000640765 MCM4P33991 863 aa9.76□□□□□ -0.85
TRPS1-212ENST00000640765 PIP4K2BP78356 416 aa9.76□□□□□ -0.85
TRPS1-212ENST00000640765 SRRTQ9BXP5 876 aaKnown RBP9.76□□□□□ -0.85
TRPS1-212ENST00000640765 UACAQ9BZF9 1416 aa9.76□□□□□ -0.85
TRPS1-212ENST00000640765 XPCQ01831 940 aaPredicted RBP9.76□□□□□ -0.85
TRPS1-212ENST00000640765 MCM6Q14566 821 aa9.76□□□□□ -0.85
TRPS1-212ENST00000640765 CCDC38Q502W7 563 aa9.76□□□□□ -0.85
TRPS1-212ENST00000640765 SMAP1Q8IYB5 467 aaPredicted RBP9.76□□□□□ -0.85
TRPS1-212ENST00000640765 BICDL2A1A5D9 508 aa9.75□□□□□ -0.85
TRPS1-212ENST00000640765 DIAPH1O60610 1272 aaKnown RBP9.75□□□□□ -0.85
TRPS1-212ENST00000640765 ERCC6LQ2NKX8 1250 aa9.75□□□□□ -0.85
TRPS1-212ENST00000640765 CCDC129Q6ZRS4 1044 aa9.75□□□□□ -0.85
TRPS1-212ENST00000640765 CCDC69A6NI79 296 aa9.75□□□□□ -0.85
TRPS1-212ENST00000640765 PIBF1Q8WXW3 757 aa9.75□□□□□ -0.85
TRPS1-212ENST00000640765 PPM1FP49593 454 aaPredicted RBP9.75□□□□□ -0.85
TRPS1-212ENST00000640765 NBPF11Q86T75 865 aa9.75□□□□□ -0.85
TRPS1-212ENST00000640765 DNAJC8O75937 253 aaPredicted RBP9.75□□□□□ -0.85
TRPS1-212ENST00000640765 PDCD7Q8N8D1 485 aaKnown RBP9.75□□□□□ -0.85
TRPS1-212ENST00000640765 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.75□□□□□ -0.85
TRPS1-212ENST00000640765 BRD2P25440 801 aaKnown RBP9.75□□□□□ -0.85
TRPS1-212ENST00000640765 FKBP5Q13451 457 aaPredicted RBP9.75□□□□□ -0.85
TRPS1-212ENST00000640765 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.75□□□□□ -0.85
TRPS1-212ENST00000640765 TTC12Q9H892 705 aaPredicted RBP9.75□□□□□ -0.85
TRPS1-212ENST00000640765 PPP1R12CQ9BZL4 782 aa9.74□□□□□ -0.85
TRPS1-212ENST00000640765 CNGA1P29973 690 aa9.74□□□□□ -0.85
TRPS1-212ENST00000640765 CCDC77Q9BR77 488 aa9.74□□□□□ -0.85
TRPS1-212ENST00000640765 SELENOOQ9BVL4 669 aa9.74□□□□□ -0.85
TRPS1-212ENST00000640765 CETN1Q12798 172 aa9.74□□□□□ -0.85
TRPS1-212ENST00000640765 RUFY3Q7L099 469 aa9.74□□□□□ -0.85
TRPS1-212ENST00000640765 MRPS9P82933 396 aaKnown RBP9.74□□□□□ -0.85
TRPS1-212ENST00000640765 PPP6R1Q9UPN7 881 aa9.74□□□□□ -0.85
TRPS1-212ENST00000640765 TUBB4AP04350 444 aa9.74□□□□□ -0.85
TRPS1-212ENST00000640765 PRDM2Q13029 1718 aa9.74□□□□□ -0.85
TRPS1-212ENST00000640765 ATP2A1O14983 1001 aa9.74□□□□□ -0.85
TRPS1-212ENST00000640765 VCX3AQ9NNX9 186 aa9.74□□□□□ -0.85
TRPS1-212ENST00000640765 CTAGE9A4FU28 777 aa9.74□□□□□ -0.85
TRPS1-212ENST00000640765 TUBBP07437 444 aa9.74□□□□□ -0.85
TRPS1-212ENST00000640765 JAKMIP2Q96AA8 810 aa9.74□□□□□ -0.85
TRPS1-212ENST00000640765 SF3B2Q13435 895 aaKnown RBP9.73□□□□□ -0.85
TRPS1-212ENST00000640765 NEDD9Q14511 834 aa9.73□□□□□ -0.85
TRPS1-212ENST00000640765 CEP85LQ5SZL2 805 aa9.73□□□□□ -0.85
TRPS1-212ENST00000640765 DRC1Q96MC2 740 aa9.73□□□□□ -0.85
TRPS1-212ENST00000640765 GCKP35557 465 aa9.73□□□□□ -0.85
TRPS1-212ENST00000640765 NEUROD6Q96NK8 337 aa9.73□□□□□ -0.85
TRPS1-212ENST00000640765 CTCFLQ8NI51 663 aaPredicted RBP9.73□□□□□ -0.85
TRPS1-212ENST00000640765 MPHOSPH9Q99550 1183 aa9.73□□□□□ -0.85
TRPS1-212ENST00000640765 PFDN1O60925 122 aa9.73□□□□□ -0.85
TRPS1-212ENST00000640765 ARHGAP25P42331 645 aa9.73□□□□□ -0.85
TRPS1-212ENST00000640765 FOXD1Q16676 465 aa9.73□□□□□ -0.85
TRPS1-212ENST00000640765 WRNQ14191 1432 aaPredicted RBP eCLIP9.73□□□□□ -0.85
TRPS1-212ENST00000640765 PRPF4BQ13523 1007 aaKnown RBP9.72□□□□□ -0.85
TRPS1-212ENST00000640765 GBP5Q96PP8 586 aa9.72□□□□□ -0.85
TRPS1-212ENST00000640765 CCDC14Q49A88 953 aa9.72□□□□□ -0.85
TRPS1-212ENST00000640765 UBTFL1P0CB47 393 aaPredicted RBP9.72□□□□□ -0.85
TRPS1-212ENST00000640765 PRPHP41219 470 aa9.72□□□□□ -0.85
TRPS1-212ENST00000640765 NBPF8Q3BBV2 869 aa9.72□□□□□ -0.85
TRPS1-212ENST00000640765 WASHC2AQ641Q2 1341 aa9.72□□□□□ -0.85
TRPS1-212ENST00000640765 ATP5DP30049 168 aa9.72□□□□□ -0.85
TRPS1-212ENST00000640765 ARL1P40616 181 aaPredicted RBP9.72□□□□□ -0.85
TRPS1-212ENST00000640765 TRPC3Q13507 836 aa9.72□□□□□ -0.85
TRPS1-212ENST00000640765 CFAP157Q5JU67 520 aa9.72□□□□□ -0.85
TRPS1-212ENST00000640765 FAM76AQ8TAV0 307 aa9.72□□□□□ -0.85
TRPS1-212ENST00000640765 RAB3IPQ96QF0 476 aaPredicted RBP9.72□□□□□ -0.85
TRPS1-212ENST00000640765 CCDC172P0C7W6 258 aa9.72□□□□□ -0.85
TRPS1-212ENST00000640765 ARFGAP2Q8N6H7 521 aa9.72□□□□□ -0.85
TRPS1-212ENST00000640765 ELL2O00472 640 aaPredicted RBP9.72□□□□□ -0.85
TRPS1-212ENST00000640765 ARHGAP24Q8N264 748 aa9.72□□□□□ -0.85
TRPS1-212ENST00000640765 SCAND2PQ9GZW5 306 aaPredicted RBP9.72□□□□□ -0.85
TRPS1-212ENST00000640765 SPATS2LQ9NUQ6 558 aaKnown RBP9.72□□□□□ -0.85
TRPS1-212ENST00000640765 LUC7L3O95232 432 aaKnown RBP9.72□□□□□ -0.85
TRPS1-212ENST00000640765 IRX4P78413 519 aa9.72□□□□□ -0.85
TRPS1-212ENST00000640765 NGDNQ8NEJ9 315 aaKnown RBP9.72□□□□□ -0.85
TRPS1-212ENST00000640765 HVCN1Q96D96 273 aa9.72□□□□□ -0.85
TRPS1-212ENST00000640765 KRBA2Q6ZNG9 492 aa9.72□□□□□ -0.85
TRPS1-212ENST00000640765 INTS8Q75QN2 995 aaKnown RBP9.72□□□□□ -0.85
TRPS1-212ENST00000640765 NDC80O14777 642 aa9.71□□□□□ -0.85
TRPS1-212ENST00000640765 NAA16Q6N069 864 aaPredicted RBP9.71□□□□□ -0.85
TRPS1-212ENST00000640765 RPAINQ86UA6 219 aa9.71□□□□□ -0.85
TRPS1-212ENST00000640765 RRBP1Q9P2E9 1410 aaKnown RBP9.71□□□□□ -0.85
TRPS1-212ENST00000640765 EIF2S2P20042 333 aaKnown RBP9.71□□□□□ -0.85
TRPS1-212ENST00000640765 GOLGA1Q92805 767 aa9.71□□□□□ -0.85
TRPS1-212ENST00000640765 LTV1Q96GA3 475 aaPredicted RBP9.71□□□□□ -0.85
TRPS1-212ENST00000640765 ZSCAN31Q96LW9 406 aaPredicted RBP9.71□□□□□ -0.85
TRPS1-212ENST00000640765 NCAPGQ9BPX3 1015 aa9.71□□□□□ -0.85
TRPS1-212ENST00000640765 NACAP1Q9BZK3 213 aa9.71□□□□□ -0.85
TRPS1-212ENST00000640765 STX1AQ16623 288 aa9.71□□□□□ -0.85
TRPS1-212ENST00000640765 GSDMBQ8TAX9 411 aa9.71□□□□□ -0.85
TRPS1-212ENST00000640765 KIAA1524Q8TCG1 905 aa9.71□□□□□ -0.85
TRPS1-212ENST00000640765 CCDC12Q8WUD4 166 aaPredicted RBP9.71□□□□□ -0.85
TRPS1-212ENST00000640765 TRMT1Q9NXH9 659 aaKnown RBP9.71□□□□□ -0.85
TRPS1-212ENST00000640765 VPS18Q9P253 973 aa9.71□□□□□ -0.85
TRPS1-212ENST00000640765 NUP155O75694 1391 aa9.71□□□□□ -0.86
TRPS1-212ENST00000640765 COG7P83436 770 aa9.71□□□□□ -0.86
TRPS1-212ENST00000640765 FERMT2Q96AC1 680 aa9.71□□□□□ -0.86
TRPS1-212ENST00000640765 KDM4AO75164 1064 aa9.71□□□□□ -0.86
TRPS1-212ENST00000640765 DNA2P51530 1060 aa9.71□□□□□ -0.86
TRPS1-212ENST00000640765 TDRD12Q587J7 1177 aaKnown RBP9.71□□□□□ -0.86
TRPS1-212ENST00000640765 RNF10Q8N5U6 811 aaKnown RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms