RNA–Protein interactions for RNA: ENST00000640652.1

SCN3A-210, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 8,825 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-210ENST00000640652 TAF7Q15545 349 aaPredicted RBP6.65□□□□□ -1.35
SCN3A-210ENST00000640652 BABAM1Q9NWV8 329 aa6.65□□□□□ -1.35
SCN3A-210ENST00000640652 CD163L1Q9NR16 1453 aa6.65□□□□□ -1.35
SCN3A-210ENST00000640652 LRSAM1Q6UWE0 723 aa6.65□□□□□ -1.35
SCN3A-210ENST00000640652 THEMISQ8N1K5 641 aaPredicted RBP6.65□□□□□ -1.35
SCN3A-210ENST00000640652 MYH11P35749 1972 aa6.65□□□□□ -1.35
SCN3A-210ENST00000640652 LMO7Q8WWI1 1683 aa6.65□□□□□ -1.35
SCN3A-210ENST00000640652 EIF2S2P20042 333 aaKnown RBP6.65□□□□□ -1.35
SCN3A-210ENST00000640652 C8orf58Q8NAV2 365 aa6.65□□□□□ -1.35
SCN3A-210ENST00000640652 KRT85P78386 507 aa6.64□□□□□ -1.35
SCN3A-210ENST00000640652 PSME1Q06323 249 aa6.64□□□□□ -1.35
SCN3A-210ENST00000640652 UBE2Q2Q8WVN8 375 aa6.64□□□□□ -1.35
SCN3A-210ENST00000640652 NECTIN2Q92692 538 aa6.64□□□□□ -1.35
SCN3A-210ENST00000640652 LRRFIP2Q9Y608 721 aaKnown RBP6.64□□□□□ -1.35
SCN3A-210ENST00000640652 EPB41L2O43491 1005 aaKnown RBP6.64□□□□□ -1.35
SCN3A-210ENST00000640652 ZNF445P59923 1031 aa6.64□□□□□ -1.35
SCN3A-210ENST00000640652 FOXD4L6Q3SYB3 417 aaPredicted RBP6.64□□□□□ -1.35
SCN3A-210ENST00000640652 FOXD4L3Q6VB84 417 aaPredicted RBP6.64□□□□□ -1.35
SCN3A-210ENST00000640652 DYNC1I1O14576 645 aa6.64□□□□□ -1.35
SCN3A-210ENST00000640652 UBE2HP62256 183 aa6.64□□□□□ -1.35
SCN3A-210ENST00000640652 DCTN1Q14203 1278 aa6.64□□□□□ -1.35
SCN3A-210ENST00000640652 TTC5Q8N0Z6 440 aa6.64□□□□□ -1.35
SCN3A-210ENST00000640652 EIF4A2Q14240 407 aaKnown RBP6.64□□□□□ -1.35
SCN3A-210ENST00000640652 PLEKHO1Q53GL0 409 aaPredicted RBP6.64□□□□□ -1.35
SCN3A-210ENST00000640652 PDCL3Q9H2J4 239 aa6.64□□□□□ -1.35
SCN3A-210ENST00000640652 TTC41PQ6P2S7 1318 aa6.64□□□□□ -1.35
SCN3A-210ENST00000640652 KRT32Q14532 448 aa6.64□□□□□ -1.35
SCN3A-210ENST00000640652 ACEP12821 1306 aa6.64□□□□□ -1.35
SCN3A-210ENST00000640652 FIBPO43427 364 aa6.63□□□□□ -1.35
SCN3A-210ENST00000640652 RNF214Q8ND24 703 aa6.63□□□□□ -1.35
SCN3A-210ENST00000640652 USP6P35125 1406 aa6.63□□□□□ -1.35
SCN3A-210ENST00000640652 LIMCH1Q9UPQ0 1083 aa6.63□□□□□ -1.35
SCN3A-210ENST00000640652 UQCRHLA0A096LP55 91 aa6.63□□□□□ -1.35
SCN3A-210ENST00000640652 PIK3C2AO00443 1686 aa6.63□□□□□ -1.35
SCN3A-210ENST00000640652 UQCRHP07919 91 aa6.63□□□□□ -1.35
SCN3A-210ENST00000640652 SASS6Q6UVJ0 657 aa6.63□□□□□ -1.35
SCN3A-210ENST00000640652 RGS12O14924 1447 aa6.63□□□□□ -1.35
SCN3A-210ENST00000640652 CHL1O00533 1208 aa6.63□□□□□ -1.35
SCN3A-210ENST00000640652 TERF1P54274 439 aa6.63□□□□□ -1.35
SCN3A-210ENST00000640652 AMOTQ4VCS5 1084 aa6.63□□□□□ -1.35
SCN3A-210ENST00000640652 ESYT1Q9BSJ8 1104 aa6.63□□□□□ -1.35
SCN3A-210ENST00000640652 SCAND2PQ9GZW5 306 aaPredicted RBP6.63□□□□□ -1.35
SCN3A-210ENST00000640652 BECN2A8MW95 431 aa6.63□□□□□ -1.35
SCN3A-210ENST00000640652 KLHL34Q8N239 644 aa6.63□□□□□ -1.35
SCN3A-210ENST00000640652 CFAP45Q9UL16 551 aa6.63□□□□□ -1.35
SCN3A-210ENST00000640652 BTBD11A6QL63 1104 aa6.62□□□□□ -1.35
SCN3A-210ENST00000640652 SMARCA5O60264 1052 aaPredicted RBP6.62□□□□□ -1.35
SCN3A-210ENST00000640652 KCNH5Q8NCM2 988 aa6.62□□□□□ -1.35
SCN3A-210ENST00000640652 BICD2Q8TD16 824 aa6.62□□□□□ -1.35
SCN3A-210ENST00000640652 MEIS3Q99687 375 aa6.62□□□□□ -1.35
SCN3A-210ENST00000640652 R3HCC1Q9Y3T6 440 aaKnown RBP6.62□□□□□ -1.35
SCN3A-210ENST00000640652 TSPYL6Q8N831 410 aa6.62□□□□□ -1.35
SCN3A-210ENST00000640652 FSD1Q9BTV5 496 aa6.62□□□□□ -1.35
SCN3A-210ENST00000640652 CHMP3Q9Y3E7 222 aa6.62□□□□□ -1.35
SCN3A-210ENST00000640652 KINO60870 393 aaKnown RBP6.62□□□□□ -1.35
SCN3A-210ENST00000640652 UVSSAQ2YD98 709 aa6.62□□□□□ -1.35
SCN3A-210ENST00000640652 SIRT1Q96EB6 747 aa6.62□□□□□ -1.35
SCN3A-210ENST00000640652 HYPKQ9NX55 129 aa6.62□□□□□ -1.35
SCN3A-210ENST00000640652 TECPR2O15040 1411 aa6.62□□□□□ -1.35
SCN3A-210ENST00000640652 ZNF853P0CG23 659 aa6.62□□□□□ -1.35
SCN3A-210ENST00000640652 CCDC73Q6ZRK6 1079 aa6.62□□□□□ -1.35
SCN3A-210ENST00000640652 TMX3Q96JJ7 454 aa6.62□□□□□ -1.35
SCN3A-210ENST00000640652 NOL7Q9UMY1 257 aaKnown RBP6.62□□□□□ -1.35
SCN3A-210ENST00000640652 STX6O43752 255 aa6.62□□□□□ -1.35
SCN3A-210ENST00000640652 PRKCSHP14314 528 aaPredicted RBP6.62□□□□□ -1.35
SCN3A-210ENST00000640652 CWC27Q6UX04 472 aaKnown RBP6.62□□□□□ -1.35
SCN3A-210ENST00000640652 CLEC17AQ6ZS10 378 aa6.62□□□□□ -1.35
SCN3A-210ENST00000640652 HMG20BQ9P0W2 317 aa6.62□□□□□ -1.35
SCN3A-210ENST00000640652 TMEM2Q9UHN6 1383 aa6.62□□□□□ -1.35
SCN3A-210ENST00000640652 MYH7BA7E2Y1 1941 aa6.62□□□□□ -1.35
SCN3A-210ENST00000640652 MYH9P35579 1960 aaKnown RBP6.62□□□□□ -1.35
SCN3A-210ENST00000640652 DHX16O60231 1041 aaKnown RBP6.62□□□□□ -1.35
SCN3A-210ENST00000640652 PDRG1Q9NUG6 133 aa6.62□□□□□ -1.35
SCN3A-210ENST00000640652 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.62□□□□□ -1.35
SCN3A-210ENST00000640652 MYO5AQ9Y4I1 1855 aaKnown RBP6.61□□□□□ -1.35
SCN3A-210ENST00000640652 PEAK1Q9H792 1746 aa6.61□□□□□ -1.35
SCN3A-210ENST00000640652 GORABQ5T7V8 394 aa6.61□□□□□ -1.35
SCN3A-210ENST00000640652 VSIG10Q8N0Z9 540 aa6.61□□□□□ -1.35
SCN3A-210ENST00000640652 HOOK1Q9UJC3 728 aaKnown RBP6.61□□□□□ -1.35
SCN3A-210ENST00000640652 LAMB4A4D0S4 1761 aa6.61□□□□□ -1.35
SCN3A-210ENST00000640652 LRRC37A3O60309 1634 aa6.61□□□□□ -1.35
SCN3A-210ENST00000640652 AACSQ86V21 672 aa6.61□□□□□ -1.35
SCN3A-210ENST00000640652 PRIMPOLQ96LW4 560 aa6.61□□□□□ -1.35
SCN3A-210ENST00000640652 TNMDQ9H2S6 317 aa6.61□□□□□ -1.35
SCN3A-210ENST00000640652 MIS18AQ9NYP9 233 aa6.61□□□□□ -1.35
SCN3A-210ENST00000640652 MAP3K11Q16584 847 aa6.61□□□□□ -1.35
SCN3A-210ENST00000640652 EVI5LQ96CN4 794 aa6.61□□□□□ -1.35
SCN3A-210ENST00000640652 ARFGEF2Q9Y6D5 1785 aa6.61□□□□□ -1.35
SCN3A-210ENST00000640652 HOXB7P09629 217 aa6.61□□□□□ -1.35
SCN3A-210ENST00000640652 ZNF396Q96N95 335 aaPredicted RBP6.61□□□□□ -1.35
SCN3A-210ENST00000640652 DBF4Q9UBU7 674 aaPredicted RBP6.61□□□□□ -1.35
SCN3A-210ENST00000640652 RAD50Q92878 1312 aa6.61□□□□□ -1.35
SCN3A-210ENST00000640652 PLEKHG1Q9ULL1 1385 aa6.6□□□□□ -1.35
SCN3A-210ENST00000640652 LARP1BQ659C4 914 aaKnown RBP6.6□□□□□ -1.35
SCN3A-210ENST00000640652 ZNF530Q6P9A1 599 aaPredicted RBP6.6□□□□□ -1.35
SCN3A-210ENST00000640652 DNAAF4Q8WXU2 420 aa6.6□□□□□ -1.35
SCN3A-210ENST00000640652 ZKSCAN5Q9Y2L8 839 aa6.6□□□□□ -1.35
SCN3A-210ENST00000640652 CCP110O43303 1012 aa6.6□□□□□ -1.35
SCN3A-210ENST00000640652 SPEF2Q9C093 1822 aa6.6□□□□□ -1.35
SCN3A-210ENST00000640652 F6X3S4 739 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms