RNA–Protein interactions for RNA: ENST00000640460.1

PAX6-272, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-272ENST00000640460 TAF7Q15545 349 aaPredicted RBP16.42■□□□□ 0.22
PAX6-272ENST00000640460 KCNQ3O43525 872 aa16.42■□□□□ 0.22
PAX6-272ENST00000640460 TRAPPC3LQ5T215 181 aa16.42■□□□□ 0.22
PAX6-272ENST00000640460 ZNF790Q6PG37 636 aa16.42■□□□□ 0.22
PAX6-272ENST00000640460 KLHL34Q8N239 644 aa16.42■□□□□ 0.22
PAX6-272ENST00000640460 ARHGEF1Q92888 912 aaKnown RBP16.42■□□□□ 0.22
PAX6-272ENST00000640460 MIS18AQ9NYP9 233 aa16.42■□□□□ 0.22
PAX6-272ENST00000640460 SALL2Q9Y467 1007 aaPredicted RBP16.42■□□□□ 0.22
PAX6-272ENST00000640460 KDM3BQ7LBC6 1761 aa16.41■□□□□ 0.22
PAX6-272ENST00000640460 INTS5Q6P9B9 1019 aaKnown RBP16.41■□□□□ 0.22
PAX6-272ENST00000640460 CYP19A1P11511 503 aaPredicted RBP16.4■□□□□ 0.22
PAX6-272ENST00000640460 ADRA2BP18089 450 aa16.4■□□□□ 0.22
PAX6-272ENST00000640460 TTC5Q8N0Z6 440 aa16.4■□□□□ 0.22
PAX6-272ENST00000640460 VSIG10Q8N0Z9 540 aa16.4■□□□□ 0.22
PAX6-272ENST00000640460 ZNF496Q96IT1 587 aaPredicted RBP16.4■□□□□ 0.22
PAX6-272ENST00000640460 HEG1Q9ULI3 1381 aa16.39■□□□□ 0.21
PAX6-272ENST00000640460 NLGN2Q8NFZ4 835 aa16.39■□□□□ 0.21
PAX6-272ENST00000640460 CCDC87Q9NVE4 849 aa16.39■□□□□ 0.21
PAX6-272ENST00000640460 KIF13BQ9NQT8 1826 aa16.38■□□□□ 0.21
PAX6-272ENST00000640460 RFC4P35249 363 aa16.37■□□□□ 0.21
PAX6-272ENST00000640460 CCDC27Q2M243 656 aa16.37■□□□□ 0.21
PAX6-272ENST00000640460 SOS1Q07889 1333 aaPredicted RBP16.37■□□□□ 0.21
PAX6-272ENST00000640460 GYS1P13807 737 aa16.36■□□□□ 0.21
PAX6-272ENST00000640460 NCBP3Q53F19 620 aaKnown RBP16.36■□□□□ 0.21
PAX6-272ENST00000640460 WWC1Q8IX03 1113 aa16.36■□□□□ 0.21
PAX6-272ENST00000640460 ZBTB1Q9Y2K1 713 aa16.36■□□□□ 0.21
PAX6-272ENST00000640460 FMNL2Q96PY5 1086 aa16.36■□□□□ 0.21
PAX6-272ENST00000640460 SRP68Q9UHB9 627 aaKnown RBP16.36■□□□□ 0.21
PAX6-272ENST00000640460 KIAA1551Q9HCM1 1747 aa16.35■□□□□ 0.21
PAX6-272ENST00000640460 TSPYL4Q9UJ04 414 aa16.35■□□□□ 0.21
PAX6-272ENST00000640460 CHD4Q14839 1912 aa16.35■□□□□ 0.21
PAX6-272ENST00000640460 USP42Q9H9J4 1324 aaKnown RBP16.34■□□□□ 0.21
PAX6-272ENST00000640460 DCAF8L1A6NGE4 600 aa16.34■□□□□ 0.21
PAX6-272ENST00000640460 CHL1O00533 1208 aa16.34■□□□□ 0.21
PAX6-272ENST00000640460 MMP10P09238 476 aa16.34■□□□□ 0.21
PAX6-272ENST00000640460 BABAM1Q9NWV8 329 aa16.34■□□□□ 0.21
PAX6-272ENST00000640460 LAS1LQ9Y4W2 734 aaKnown RBP16.34■□□□□ 0.21
PAX6-272ENST00000640460 COL15A1P39059 1388 aa16.34■□□□□ 0.21
PAX6-272ENST00000640460 LAMB4A4D0S4 1761 aa16.34■□□□□ 0.21
PAX6-272ENST00000640460 NLGN1Q8N2Q7 840 aa16.33■□□□□ 0.21
PAX6-272ENST00000640460 CDCA7LQ96GN5 454 aa16.33■□□□□ 0.21
PAX6-272ENST00000640460 CFAP44Q96MT7 982 aa16.33■□□□□ 0.21
PAX6-272ENST00000640460 SUPT16HQ9Y5B9 1047 aaKnown RBP16.33■□□□□ 0.21
PAX6-272ENST00000640460 CD2APQ9Y5K6 639 aa16.33■□□□□ 0.21
PAX6-272ENST00000640460 ZNF853P0CG23 659 aa16.33■□□□□ 0.2
PAX6-272ENST00000640460 EIF4A1P60842 406 aaKnown RBP16.33■□□□□ 0.2
PAX6-272ENST00000640460 N4BP2Q86UW6 1770 aaPredicted RBP16.33■□□□□ 0.2
PAX6-272ENST00000640460 ZNF521Q96K83 1311 aa16.32■□□□□ 0.2
PAX6-272ENST00000640460 PRAMEF22A3QJZ6 481 aa16.32■□□□□ 0.2
PAX6-272ENST00000640460 STARD3NLO95772 234 aa16.32■□□□□ 0.2
PAX6-272ENST00000640460 CANXP27824 592 aaKnown RBP16.32■□□□□ 0.2
PAX6-272ENST00000640460 CALD1Q05682 793 aaKnown RBP16.32■□□□□ 0.2
PAX6-272ENST00000640460 FKBP8Q14318 412 aa16.32■□□□□ 0.2
PAX6-272ENST00000640460 TEX13AQ9BXU3 409 aaPredicted RBP16.32■□□□□ 0.2
PAX6-272ENST00000640460 IFT57Q9NWB7 429 aa16.32■□□□□ 0.2
PAX6-272ENST00000640460 AFDNP55196 1824 aaKnown RBP16.32■□□□□ 0.2
PAX6-272ENST00000640460 SCN7AQ01118 1682 aa16.32■□□□□ 0.2
PAX6-272ENST00000640460 NGEFQ8N5V2 710 aa16.31■□□□□ 0.2
PAX6-272ENST00000640460 GOLGB1Q14789 3259 aaKnown RBP16.31■□□□□ 0.2
PAX6-272ENST00000640460 UTRNP46939 3433 aa16.31■□□□□ 0.2
PAX6-272ENST00000640460 MBIPQ9NS73 344 aa16.31■□□□□ 0.2
PAX6-272ENST00000640460 BCORQ6W2J9 1755 aa16.3■□□□□ 0.2
PAX6-272ENST00000640460 A1BGP04217 495 aa16.3■□□□□ 0.2
PAX6-272ENST00000640460 SNRPA1P09661 255 aaKnown RBP16.3■□□□□ 0.2
PAX6-272ENST00000640460 EIF5P55010 431 aaKnown RBP16.3■□□□□ 0.2
PAX6-272ENST00000640460 GNAI1P63096 354 aa16.3■□□□□ 0.2
PAX6-272ENST00000640460 USPL1Q5W0Q7 1092 aa16.3■□□□□ 0.2
PAX6-272ENST00000640460 USP16Q9Y5T5 823 aa16.3■□□□□ 0.2
PAX6-272ENST00000640460 GIGYF1O75420 1035 aaPredicted RBP16.29■□□□□ 0.2
PAX6-272ENST00000640460 GPR162Q16538 588 aa16.29■□□□□ 0.2
PAX6-272ENST00000640460 WDR63Q8IWG1 891 aa16.29■□□□□ 0.2
PAX6-272ENST00000640460 NARFQ9UHQ1 456 aa16.29■□□□□ 0.2
PAX6-272ENST00000640460 BRCA1P38398 1863 aaKnown RBP16.29■□□□□ 0.2
PAX6-272ENST00000640460 C10orf71Q711Q0 1435 aa16.29■□□□□ 0.2
PAX6-272ENST00000640460 NRXN2Q9P2S2 1712 aa16.29■□□□□ 0.2
PAX6-272ENST00000640460 ZPR1O75312 459 aa16.28■□□□□ 0.2
PAX6-272ENST00000640460 DDR1Q08345 913 aa16.28■□□□□ 0.2
PAX6-272ENST00000640460 KRT24Q2M2I5 525 aa16.28■□□□□ 0.2
PAX6-272ENST00000640460 BCL2L12Q9HB09 334 aa16.28■□□□□ 0.2
PAX6-272ENST00000640460 IL16Q14005 1332 aa16.28■□□□□ 0.2
PAX6-272ENST00000640460 YBX3P16989 372 aaKnown RBP eCLIP16.28■□□□□ 0.2
PAX6-272ENST00000640460 PELP1Q8IZL8 1130 aaKnown RBP16.28■□□□□ 0.2
PAX6-272ENST00000640460 PARP3Q9Y6F1 533 aa16.28■□□□□ 0.2
PAX6-272ENST00000640460 TM4SF1P30408 202 aa16.27■□□□□ 0.19
PAX6-272ENST00000640460 TSR2Q969E8 191 aaKnown RBP16.27■□□□□ 0.19
PAX6-272ENST00000640460 SPINK5Q9NQ38 1064 aaPredicted RBP16.27■□□□□ 0.19
PAX6-272ENST00000640460 PXDNLA1KZ92 1463 aa16.27■□□□□ 0.19
PAX6-272ENST00000640460 YY1P25490 414 aa16.26■□□□□ 0.19
PAX6-272ENST00000640460 IL6STP40189 918 aaPredicted RBP16.26■□□□□ 0.19
PAX6-272ENST00000640460 PIP4K2AP48426 406 aaPredicted RBP16.26■□□□□ 0.19
PAX6-272ENST00000640460 POLRMTO00411 1230 aaKnown RBP16.25■□□□□ 0.19
PAX6-272ENST00000640460 ZNF330Q9Y3S2 320 aaPredicted RBP16.25■□□□□ 0.19
PAX6-272ENST00000640460 NFIXQ14938 502 aa16.25■□□□□ 0.19
PAX6-272ENST00000640460 A0A087WZG4 1122 aa16.24■□□□□ 0.19
PAX6-272ENST00000640460 WWC3Q9ULE0 1092 aa16.24■□□□□ 0.19
PAX6-272ENST00000640460 TBC1D2BQ9UPU7 963 aa16.24■□□□□ 0.19
PAX6-272ENST00000640460 FANCIQ9NVI1 1328 aa16.23■□□□□ 0.19
PAX6-272ENST00000640460 NBPF26B4DH59 902 aa16.22■□□□□ 0.19
PAX6-272ENST00000640460 GOLGA2Q08379 1002 aa16.22■□□□□ 0.19
PAX6-272ENST00000640460 NBPF10Q6P3W6 841 aaKnown RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms